RNA–Protein interactions for RNA: YGL244W

RTF1, Transcript of Subunit of RNAPII-associated chromatin remodeling Paf1 complex, yeastyeast

Gene RTF1, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTF1YGL244W YPL277CQ08989 487 aa12.19□□□□□ -0.46
RTF1YGL244W SWI6P09959 803 aa12.19□□□□□ -0.46
RTF1YGL244W GCD6P32501 712 aaKnown RBP12.19□□□□□ -0.46
RTF1YGL244W ZUO1P32527 433 aaKnown RBP12.19□□□□□ -0.46
RTF1YGL244W RPC37P36121 282 aa12.19□□□□□ -0.46
RTF1YGL244W MMS21P38632 267 aa12.19□□□□□ -0.46
RTF1YGL244W HIS2P38635 335 aa12.19□□□□□ -0.46
RTF1YGL244W TIF4631P39935 952 aaKnown RBP12.19□□□□□ -0.46
RTF1YGL244W GSM1P42950 618 aa12.19□□□□□ -0.46
RTF1YGL244W MDR1P53258 950 aa12.19□□□□□ -0.46
RTF1YGL244W LSB1P53281 241 aa12.19□□□□□ -0.46
RTF1YGL244W ESBP6P53918 673 aa12.19□□□□□ -0.46
RTF1YGL244W MTG1Q03151 367 aaPredicted RBP12.19□□□□□ -0.46
RTF1YGL244W KAR3P17119 729 aa12.18□□□□□ -0.46
RTF1YGL244W PWP2P25635 923 aaKnown RBP12.18□□□□□ -0.46
RTF1YGL244W BUD14P27637 709 aa12.18□□□□□ -0.46
RTF1YGL244W YME2P32843 850 aa12.18□□□□□ -0.46
RTF1YGL244W SPC72P39723 622 aa12.18□□□□□ -0.46
RTF1YGL244W YMR1P47147 688 aaKnown RBP RIP-Chip data12.18□□□□□ -0.46not detected
RTF1YGL244W RPL22BP56628 122 aaKnown RBP12.18□□□□□ -0.46
RTF1YGL244W ALR1Q08269 859 aa12.18□□□□□ -0.46
RTF1YGL244W RIB2Q12362 591 aaKnown RBP12.18□□□□□ -0.46
RTF1YGL244W MVD1P32377 396 aaKnown RBP12.17□□□□□ -0.46
RTF1YGL244W TFC4P33339 1025 aa12.17□□□□□ -0.46
RTF1YGL244W RRT2P38332 387 aa12.17□□□□□ -0.46
RTF1YGL244W FIG4P42837 879 aa12.17□□□□□ -0.46
RTF1YGL244W RPS0BP46654 252 aaKnown RBP12.17□□□□□ -0.46
RTF1YGL244W SPO19Q03029 223 aa12.17□□□□□ -0.46
RTF1YGL244W OXR1Q08952 273 aa12.17□□□□□ -0.46
RTF1YGL244W GNT1Q12096 491 aa12.17□□□□□ -0.46
RTF1YGL244W PEP5P12868 1029 aa12.16□□□□□ -0.46
RTF1YGL244W SPO16P17122 198 aa12.16□□□□□ -0.46
RTF1YGL244W BAS1P22035 811 aa12.16□□□□□ -0.46
RTF1YGL244W EUG1P32474 517 aa12.16□□□□□ -0.46
RTF1YGL244W STE13P33894 931 aa12.16□□□□□ -0.46
RTF1YGL244W SUL1P38359 859 aa12.16□□□□□ -0.46
RTF1YGL244W VPS53P47061 822 aa12.16□□□□□ -0.46
RTF1YGL244W YML082WQ04533 649 aaKnown RBP12.16□□□□□ -0.46
RTF1YGL244W MPC54Q08550 464 aa12.16□□□□□ -0.46
RTF1YGL244W VPS35P34110 944 aa12.16□□□□□ -0.46
RTF1YGL244W UBP9P39967 754 aa12.16□□□□□ -0.46
RTF1YGL244W SET4P42948 560 aa12.16□□□□□ -0.46
RTF1YGL244W HUL5P53119 910 aa12.16□□□□□ -0.46
RTF1YGL244W CUS1Q02554 436 aaPredicted RBP12.16□□□□□ -0.46
RTF1YGL244W SHR3Q02774 210 aa12.16□□□□□ -0.46
RTF1YGL244W SHE9Q04172 456 aa12.16□□□□□ -0.46
RTF1YGL244W TMA64Q04600 565 aaKnown RBP12.16□□□□□ -0.46
RTF1YGL244W SUE1Q06524 206 aa12.16□□□□□ -0.46
RTF1YGL244W SNF1P06782 633 aaKnown RBP12.15□□□□□ -0.46
RTF1YGL244W GCD2P12754 651 aaPredicted RBP12.15□□□□□ -0.46
RTF1YGL244W IME1P21190 360 aa12.15□□□□□ -0.46
RTF1YGL244W PBP2P38151 413 aaKnown RBP RIP-Chip data12.15□□□□□ -0.46not detected
RTF1YGL244W TOS1P38288 455 aa12.15□□□□□ -0.46
RTF1YGL244W PAN5P38787 379 aa12.15□□□□□ -0.46
RTF1YGL244W YIL001WP40560 513 aa12.15□□□□□ -0.46
RTF1YGL244W YNL144CP53907 740 aa12.15□□□□□ -0.46
RTF1YGL244W MDM38Q08179 573 aa12.15□□□□□ -0.46
RTF1YGL244W PCL8Q08966 492 aa12.15□□□□□ -0.46
RTF1YGL244W ACM1Q08981 209 aa12.15□□□□□ -0.46
RTF1YGL244W YMR085WP0CF18 432 aa12.14□□□□□ -0.47
RTF1YGL244W CLB4P24871 460 aa12.14□□□□□ -0.47
RTF1YGL244W PFF1P38244 976 aa12.14□□□□□ -0.47
RTF1YGL244W YIL055CP40523 627 aaKnown RBP12.14□□□□□ -0.47
RTF1YGL244W ATG1P53104 897 aa12.14□□□□□ -0.47
RTF1YGL244W OSW1Q08692 278 aa12.14□□□□□ -0.47
RTF1YGL244W PCK1P10963 549 aa12.13□□□□□ -0.47
RTF1YGL244W SAM2P19358 384 aaKnown RBP12.13□□□□□ -0.47
RTF1YGL244W RET1P22276 1149 aaKnown RBP12.13□□□□□ -0.47
RTF1YGL244W SEC21P32074 935 aaKnown RBP12.13□□□□□ -0.47
RTF1YGL244W CDC11P32458 415 aa12.13□□□□□ -0.47
RTF1YGL244W YEL1P34225 687 aa12.13□□□□□ -0.47
RTF1YGL244W SSP1P38871 571 aa12.13□□□□□ -0.47
RTF1YGL244W REV7P38927 245 aa12.13□□□□□ -0.47
RTF1YGL244W END3P39013 349 aa12.13□□□□□ -0.47
RTF1YGL244W SEN54Q02825 467 aaPredicted RBP12.13□□□□□ -0.47
RTF1YGL244W OYE2Q03558 400 aaKnown RBP12.13□□□□□ -0.47
RTF1YGL244W RPS7AP26786 190 aaKnown RBP12.13□□□□□ -0.47
RTF1YGL244W RAD54P32863 898 aa12.13□□□□□ -0.47
RTF1YGL244W TRZ1P36159 838 aaPredicted RBP12.13□□□□□ -0.47
RTF1YGL244W AXL1P40851 1208 aa12.13□□□□□ -0.47
RTF1YGL244W MDJ2P42834 146 aa12.13□□□□□ -0.47
RTF1YGL244W NNF2P53253 936 aa12.13□□□□□ -0.47
RTF1YGL244W UBP3Q01477 912 aaKnown RBP RIP-Chip data12.13□□□□□ -0.47not detected
RTF1YGL244W YDR278CQ05612 105 aa12.13□□□□□ -0.47
RTF1YGL244W ACK1Q07622 623 aaPredicted RBP12.13□□□□□ -0.47
RTF1YGL244W EXO5P38289 585 aa12.12□□□□□ -0.47
RTF1YGL244W FZO1P38297 855 aa12.12□□□□□ -0.47
RTF1YGL244W BRE2P43132 505 aa12.12□□□□□ -0.47
RTF1YGL244W ZIP2P53061 704 aa12.12□□□□□ -0.47
RTF1YGL244W ERP6P53198 216 aa12.12□□□□□ -0.47
RTF1YGL244W CHS2P14180 963 aa12.11□□□□□ -0.47
RTF1YGL244W PWP1P21304 576 aaKnown RBP12.11□□□□□ -0.47
RTF1YGL244W SSE1P32589 693 aaKnown RBP12.11□□□□□ -0.47
RTF1YGL244W VHC1P38329 1120 aa12.11□□□□□ -0.47
RTF1YGL244W MSG5P38590 489 aa12.11□□□□□ -0.47
RTF1YGL244W ULP2P40537 1034 aaPredicted RBP12.11□□□□□ -0.47
RTF1YGL244W DOS2P54858 310 aa12.11□□□□□ -0.47
RTF1YGL244W AAD16Q02895 342 aa12.11□□□□□ -0.47
RTF1YGL244W ERO1Q03103 563 aa12.11□□□□□ -0.47
RTF1YGL244W UTP4Q06679 776 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 5,963 RNA–protein pairs in 61.9 ms