RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeastyeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTR3YFR029W YLR287CQ05881 355 aa4.61□□□□□ -1.67
PTR3YFR029W YOL114CQ12322 202 aa4.61□□□□□ -1.67
PTR3YFR029W PAH1P32567 862 aa4.6□□□□□ -1.67
PTR3YFR029W SLA1P32790 1244 aa4.6□□□□□ -1.67
PTR3YFR029W PSY4P38193 441 aa4.6□□□□□ -1.67
PTR3YFR029W CKB2P38930 258 aa4.6□□□□□ -1.67
PTR3YFR029W SAH1P39954 449 aaKnown RBP4.6□□□□□ -1.67
PTR3YFR029W YIL166CP40445 542 aa4.6□□□□□ -1.67
PTR3YFR029W YTM1Q12024 460 aaPredicted RBP4.6□□□□□ -1.67
PTR3YFR029W TUF1P02992 437 aaKnown RBP4.6□□□□□ -1.67
PTR3YFR029W MRP7P12687 371 aa4.6□□□□□ -1.67
PTR3YFR029W MSD1P15179 658 aaKnown RBP4.6□□□□□ -1.67
PTR3YFR029W FUR1P18562 216 aaKnown RBP4.6□□□□□ -1.67
PTR3YFR029W DAL7P21826 554 aa4.6□□□□□ -1.67
PTR3YFR029W PIN4P34217 668 aaKnown RBP RIP-Chip data4.6□□□□□ -1.67not detected
PTR3YFR029W SQT1P35184 431 aa4.6□□□□□ -1.67
PTR3YFR029W NOP16P40007 231 aaKnown RBP4.6□□□□□ -1.67
PTR3YFR029W LSM5P40089 93 aaKnown RBP4.6□□□□□ -1.67
PTR3YFR029W VHR1P40522 640 aa4.6□□□□□ -1.67
PTR3YFR029W CIT3P43635 486 aa4.6□□□□□ -1.67
PTR3YFR029W MRPL19P53875 158 aa4.6□□□□□ -1.67
PTR3YFR029W ALF1P53904 254 aa4.6□□□□□ -1.67
PTR3YFR029W PEX13P80667 386 aa4.6□□□□□ -1.67
PTR3YFR029W RAT1Q02792 1006 aaKnown RBP4.6□□□□□ -1.67
PTR3YFR029W UTP21Q06078 939 aaPredicted RBP4.6□□□□□ -1.67
PTR3YFR029W RKM4Q12504 494 aa4.6□□□□□ -1.67
PTR3YFR029W SMC6Q12749 1114 aa4.6□□□□□ -1.67
PTR3YFR029W RPP2BP02400 110 aaKnown RBP4.59□□□□□ -1.67
PTR3YFR029W LEU1P07264 779 aaKnown RBP4.59□□□□□ -1.67
PTR3YFR029W HSF1P10961 833 aa4.59□□□□□ -1.67
PTR3YFR029W RED1P14291 827 aa4.59□□□□□ -1.67
PTR3YFR029W RET1P22276 1149 aaKnown RBP4.59□□□□□ -1.67
PTR3YFR029W RER1P25560 188 aa4.59□□□□□ -1.67
PTR3YFR029W CBF2P32504 956 aa4.59□□□□□ -1.67
PTR3YFR029W MTH1P35198 433 aa4.59□□□□□ -1.67
PTR3YFR029W PCM1P38628 557 aaKnown RBP4.59□□□□□ -1.67
PTR3YFR029W LTP1P40347 161 aa4.59□□□□□ -1.67
PTR3YFR029W SEC9P40357 651 aa4.59□□□□□ -1.67
PTR3YFR029W IMA5P40884 581 aa4.59□□□□□ -1.67
PTR3YFR029W GCD10P41814 478 aa4.59□□□□□ -1.67
PTR3YFR029W RMD8P43620 662 aa4.59□□□□□ -1.67
PTR3YFR029W YGL176CP46945 554 aa4.59□□□□□ -1.67
PTR3YFR029W SET2P46995 733 aaKnown RBP4.59□□□□□ -1.67
PTR3YFR029W RNR4P49723 345 aaKnown RBP4.59□□□□□ -1.67
PTR3YFR029W MSN5P52918 1224 aa4.59□□□□□ -1.67
PTR3YFR029W BNI5P53890 448 aaKnown RBP4.59□□□□□ -1.67
PTR3YFR029W CUS1Q02554 436 aaPredicted RBP4.59□□□□□ -1.67
PTR3YFR029W YMR018WQ04364 514 aa4.59□□□□□ -1.67
PTR3YFR029W RNH1Q04740 348 aa4.59□□□□□ -1.67
PTR3YFR029W YPR172WQ06608 200 aa4.59□□□□□ -1.67
PTR3YFR029W HIM1Q06674 414 aa4.59□□□□□ -1.67
PTR3YFR029W CUE5Q08412 411 aaKnown RBP4.59□□□□□ -1.67
PTR3YFR029W NOP58Q12499 511 aaKnown RBP4.59□□□□□ -1.67
PTR3YFR029W MIH1P23748 554 aa4.58□□□□□ -1.68
PTR3YFR029W PGS1P25578 521 aa4.58□□□□□ -1.68
PTR3YFR029W DUN1P39009 513 aa4.58□□□□□ -1.68
PTR3YFR029W JEM1P40358 645 aa4.58□□□□□ -1.68
PTR3YFR029W MPH1P40562 993 aa4.58□□□□□ -1.68
PTR3YFR029W AXL1P40851 1208 aa4.58□□□□□ -1.68
PTR3YFR029W GZF3P42944 551 aaKnown RBP4.58□□□□□ -1.68
PTR3YFR029W SYF1Q04048 859 aaPredicted RBP4.58□□□□□ -1.68
PTR3YFR029W YDR338CQ05497 695 aa4.58□□□□□ -1.68
PTR3YFR029W ENT1Q12518 454 aa4.58□□□□□ -1.68
PTR3YFR029W RPS21AP0C0V8 87 aaKnown RBP4.58□□□□□ -1.68
PTR3YFR029W YER152CP10356 443 aa4.58□□□□□ -1.68
PTR3YFR029W CBP3P21560 335 aa4.58□□□□□ -1.68
PTR3YFR029W AFR1P33304 620 aa4.58□□□□□ -1.68
PTR3YFR029W PET10P36139 283 aa4.58□□□□□ -1.68
PTR3YFR029W YBR238CP38330 731 aaKnown RBP4.58□□□□□ -1.68
PTR3YFR029W SRP72P38688 640 aaKnown RBP4.58□□□□□ -1.68
PTR3YFR029W AXL2P38928 823 aa4.58□□□□□ -1.68
PTR3YFR029W SIT1P39980 628 aa4.58□□□□□ -1.68
PTR3YFR029W TAD1P53065 400 aa4.58□□□□□ -1.68
PTR3YFR029W AIM14P53109 570 aa4.58□□□□□ -1.68
PTR3YFR029W ARC35P53731 342 aaKnown RBP4.58□□□□□ -1.68
PTR3YFR029W YNR040WP53736 256 aa4.58□□□□□ -1.68
PTR3YFR029W ECM9Q02202 377 aa4.58□□□□□ -1.68
PTR3YFR029W PRP42Q03776 544 aaKnown RBP4.58□□□□□ -1.68
PTR3YFR029W AOS1Q06624 347 aa4.58□□□□□ -1.68
PTR3YFR029W APC5Q08683 685 aa4.58□□□□□ -1.68
PTR3YFR029W SMF3Q12078 473 aaPredicted RBP4.58□□□□□ -1.68
PTR3YFR029W REX3Q12090 404 aa4.58□□□□□ -1.68
PTR3YFR029W RMP1Q12530 201 aa4.58□□□□□ -1.68
PTR3YFR029W SCP160P06105 1222 aaKnown RBP RIP-Chip data4.57□□□□□ -1.68not detected
PTR3YFR029W TY1A-LR4P0C2I8 440 aaKnown RBP4.57□□□□□ -1.68
PTR3YFR029W TY1A-DR6P0CX70 440 aa4.57□□□□□ -1.68
PTR3YFR029W TY1A-ER1P0CX71 440 aa4.57□□□□□ -1.68
PTR3YFR029W TY1A-LR2P0CX72 440 aa4.57□□□□□ -1.68
PTR3YFR029W TY1A-PLP0CX73 440 aa4.57□□□□□ -1.68
PTR3YFR029W TY1A-JR1P0CX74 440 aa4.57□□□□□ -1.68
PTR3YFR029W TY1A-LR3P0CX75 440 aa4.57□□□□□ -1.68
PTR3YFR029W TY1A-ML2P0CX76 440 aa4.57□□□□□ -1.68
PTR3YFR029W COX11P19516 300 aaKnown RBP4.57□□□□□ -1.68
PTR3YFR029W SYP1P25623 870 aaKnown RBP4.57□□□□□ -1.68
PTR3YFR029W PDC6P26263 563 aaKnown RBP4.57□□□□□ -1.68
PTR3YFR029W CMK1P27466 446 aaKnown RBP4.57□□□□□ -1.68
PTR3YFR029W TFB1P32776 642 aa4.57□□□□□ -1.68
PTR3YFR029W AFG2P32794 780 aa4.57□□□□□ -1.68
PTR3YFR029W SHM2P37291 469 aaKnown RBP4.57□□□□□ -1.68
PTR3YFR029W YEL068CP39977 110 aa4.57□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms