RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPB4	YFL002C	TAN1	P53072	289 aa	Predicted RBP	4.82	□□□□□ -1.64
SPB4	YFL002C	SLD3	P53135	668 aa		4.82	□□□□□ -1.64
SPB4	YFL002C	ENA2	Q01896	1091 aa		4.82	□□□□□ -1.64
SPB4	YFL002C	HOS3	Q02959	697 aa	Known RBP	4.82	□□□□□ -1.64
SPB4	YFL002C	MDM38	Q08179	573 aa		4.82	□□□□□ -1.64
SPB4	YFL002C	YOR223W	Q12015	292 aa		4.82	□□□□□ -1.64
SPB4	YFL002C	ENA5	Q12691	1091 aa		4.82	□□□□□ -1.64
SPB4	YFL002C	MPH2	P0CD99	609 aa		4.81	□□□□□ -1.64
SPB4	YFL002C	CCR4	P31384	837 aa	Known RBP	4.81	□□□□□ -1.64
SPB4	YFL002C	PGM2	P37012	569 aa	Known RBP	4.81	□□□□□ -1.64
SPB4	YFL002C	DOT6	P40059	670 aa	Known RBP	4.81	□□□□□ -1.64
SPB4	YFL002C	AIM21	P40563	679 aa		4.81	□□□□□ -1.64
SPB4	YFL002C	MDG1	P53885	366 aa		4.81	□□□□□ -1.64
SPB4	YFL002C	DOT1	Q04089	582 aa	Known RBP	4.81	□□□□□ -1.64
SPB4	YFL002C	HRK1	Q08732	759 aa	Known RBP	4.81	□□□□□ -1.64
SPB4	YFL002C	APA1	P16550	321 aa	Known RBP	4.81	□□□□□ -1.64
SPB4	YFL002C	COX11	P19516	300 aa	Known RBP	4.81	□□□□□ -1.64
SPB4	YFL002C	MIH1	P23748	554 aa		4.81	□□□□□ -1.64
SPB4	YFL002C	DBF20	P32328	564 aa		4.81	□□□□□ -1.64
SPB4	YFL002C	KTR4	P38131	464 aa		4.81	□□□□□ -1.64
SPB4	YFL002C	TDA3	P38758	523 aa		4.81	□□□□□ -1.64
SPB4	YFL002C	YER158C	P40095	573 aa		4.81	□□□□□ -1.64
SPB4	YFL002C	YJL045W	P47052	634 aa		4.81	□□□□□ -1.64
SPB4	YFL002C	HXT16	P47185	567 aa		4.81	□□□□□ -1.64
SPB4	YFL002C	MTC3	P53077	123 aa		4.81	□□□□□ -1.64
SPB4	YFL002C	ESF2	P53743	316 aa	Known RBP	4.81	□□□□□ -1.64
SPB4	YFL002C	SKY1	Q03656	742 aa		4.81	□□□□□ -1.64
SPB4	YFL002C	GIR2	Q03768	265 aa	Predicted RBP	4.81	□□□□□ -1.64
SPB4	YFL002C	SMY2	P32909	740 aa	Known RBP	4.8	□□□□□ -1.64
SPB4	YFL002C	HSL7	P38274	827 aa		4.8	□□□□□ -1.64
SPB4	YFL002C	CEM1	P39525	442 aa		4.8	□□□□□ -1.64
SPB4	YFL002C	SAP185	P40856	1058 aa		4.8	□□□□□ -1.64
SPB4	YFL002C	YFL054C	P43549	646 aa		4.8	□□□□□ -1.64
SPB4	YFL002C	ALY2	P47029	1046 aa		4.8	□□□□□ -1.64
SPB4	YFL002C	TNA1	P53322	534 aa		4.8	□□□□□ -1.64
SPB4	YFL002C	PEX15	Q08215	383 aa		4.8	□□□□□ -1.64
SPB4	YFL002C	RRI2	Q12348	645 aa		4.8	□□□□□ -1.64
SPB4	YFL002C	PDC5	P16467	563 aa	Known RBP	4.79	□□□□□ -1.64
SPB4	YFL002C	PFK1	P16861	987 aa	Known RBP	4.79	□□□□□ -1.64
SPB4	YFL002C	SNF5	P18480	905 aa		4.79	□□□□□ -1.64
SPB4	YFL002C	YSC84	P32793	468 aa		4.79	□□□□□ -1.64
SPB4	YFL002C	HXT6	P39003	570 aa	Known RBP	4.79	□□□□□ -1.64
SPB4	YFL002C	HXT7	P39004	570 aa		4.79	□□□□□ -1.64
SPB4	YFL002C	ACA1	P39970	489 aa		4.79	□□□□□ -1.64
SPB4	YFL002C	NPP2	P39997	493 aa		4.79	□□□□□ -1.64
SPB4	YFL002C	DSE4	P53753	1117 aa		4.79	□□□□□ -1.64
SPB4	YFL002C	YML131W	Q03102	365 aa		4.79	□□□□□ -1.64
SPB4	YFL002C	SRT1	Q03175	343 aa		4.79	□□□□□ -1.64
SPB4	YFL002C	BI4	P03879	638 aa		4.79	□□□□□ -1.64
SPB4	YFL002C	DAL7	P21826	554 aa		4.79	□□□□□ -1.64
SPB4	YFL002C	KNS1	P32350	737 aa	Predicted RBP	4.79	□□□□□ -1.64
SPB4	YFL002C	GIC1	P38785	314 aa		4.79	□□□□□ -1.64
SPB4	YFL002C	TAF1	P46677	1066 aa		4.79	□□□□□ -1.64
SPB4	YFL002C	UBC9	P50623	157 aa	Predicted RBP	4.79	□□□□□ -1.64
SPB4	YFL002C	TAD1	P53065	400 aa		4.79	□□□□□ -1.64
SPB4	YFL002C	NCE103	P53615	221 aa		4.79	□□□□□ -1.64
SPB4	YFL002C	NOG2	P53742	486 aa	Known RBP	4.79	□□□□□ -1.64
SPB4	YFL002C	HFI1	Q12060	488 aa		4.79	□□□□□ -1.64
SPB4	YFL002C	MSS18	P08593	268 aa		4.78	□□□□□ -1.64
SPB4	YFL002C	RPS21A	P0C0V8	87 aa	Known RBP	4.78	□□□□□ -1.64
SPB4	YFL002C	HSC82	P15108	705 aa	Known RBP	4.78	□□□□□ -1.64
SPB4	YFL002C	YKU70	P32807	602 aa		4.78	□□□□□ -1.64
SPB4	YFL002C	ALG14	P38242	237 aa		4.78	□□□□□ -1.64
SPB4	YFL002C	NMD3	P38861	518 aa	Known RBP	4.78	□□□□□ -1.64
SPB4	YFL002C	RLP7	P40693	322 aa	Known RBP	4.78	□□□□□ -1.64
SPB4	YFL002C	YPR027C	Q12079	277 aa		4.78	□□□□□ -1.64
SPB4	YFL002C	APM4	Q99186	491 aa		4.78	□□□□□ -1.64
SPB4	YFL002C	FUN30	P31380	1131 aa		4.77	□□□□□ -1.65
SPB4	YFL002C	RRT14	P40470	206 aa		4.77	□□□□□ -1.65
SPB4	YFL002C	QRI7	P43122	407 aa		4.77	□□□□□ -1.65
SPB4	YFL002C	CNM67	P53865	581 aa	Known RBP	4.77	□□□□□ -1.65
SPB4	YFL002C	PTA1	Q01329	785 aa	Predicted RBP	4.77	□□□□□ -1.65
SPB4	YFL002C	PUS1	Q12211	544 aa	Known RBP	4.77	□□□□□ -1.65
SPB4	YFL002C	GPM1	P00950	247 aa	Known RBP	4.76	□□□□□ -1.65
SPB4	YFL002C	PHO81	P17442	1178 aa		4.76	□□□□□ -1.65
SPB4	YFL002C	GFD2	P25370	566 aa	Known RBP	4.76	□□□□□ -1.65
SPB4	YFL002C	MDJ1	P35191	511 aa		4.76	□□□□□ -1.65
SPB4	YFL002C	ICP55	P40051	511 aa		4.76	□□□□□ -1.65
SPB4	YFL002C	ENV11	P53246	860 aa		4.76	□□□□□ -1.65
SPB4	YFL002C	SFB2	P53953	876 aa		4.76	□□□□□ -1.65
SPB4	YFL002C	YHM2	Q04013	314 aa		4.76	□□□□□ -1.65
SPB4	YFL002C	LRS4	Q04087	347 aa	Known RBP	4.76	□□□□□ -1.65
SPB4	YFL002C	ECM38	Q05902	660 aa	Predicted RBP	4.76	□□□□□ -1.65
SPB4	YFL002C	NBA1	Q08229	501 aa	Known RBP	4.76	□□□□□ -1.65
SPB4	YFL002C	YBR182C-A	Q8TGU6	64 aa		4.76	□□□□□ -1.65
SPB4	YFL002C	DIF1	O13577	133 aa		4.76	□□□□□ -1.65
SPB4	YFL002C	YCL002C	P25565	263 aa		4.76	□□□□□ -1.65
SPB4	YFL002C	RPC82	P32349	654 aa		4.76	□□□□□ -1.65
SPB4	YFL002C	SER1	P33330	395 aa	Known RBP	4.76	□□□□□ -1.65
SPB4	YFL002C	OAF3	P36023	863 aa		4.76	□□□□□ -1.65
SPB4	YFL002C	MDM1	Q01846	1127 aa		4.76	□□□□□ -1.65
SPB4	YFL002C	TPP1	Q03796	238 aa		4.76	□□□□□ -1.65
SPB4	YFL002C	YPR196W	Q06595	470 aa		4.76	□□□□□ -1.65
SPB4	YFL002C	PUS7	Q08647	676 aa	Known RBP	4.76	□□□□□ -1.65
SPB4	YFL002C	RTP1	Q12751	981 aa		4.76	□□□□□ -1.65
SPB4	YFL002C	COQ4	O13525	335 aa		4.75	□□□□□ -1.65
SPB4	YFL002C	RFA1	P22336	621 aa	Known RBP	4.75	□□□□□ -1.65
SPB4	YFL002C	GPT2	P36148	743 aa		4.75	□□□□□ -1.65
SPB4	YFL002C	PIK1	P39104	1066 aa		4.75	□□□□□ -1.65
SPB4	YFL002C	IES1	P43579	692 aa		4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 108.7 ms