RNA–Protein interactions for RNA: YEL051W

VMA8, Transcript of Subunit D of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA8, Length 771 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA8	YEL051W	HBN1	Q96VH4	193 aa		4.29	□□□□□ -1.72
VMA8	YEL051W	FBP1	P09201	348 aa		4.28	□□□□□ -1.72
VMA8	YEL051W	CAD1	P24813	409 aa	Known RBP	4.28	□□□□□ -1.72
VMA8	YEL051W	HRR25	P29295	494 aa	Known RBP	4.28	□□□□□ -1.72
VMA8	YEL051W	RPD3	P32561	433 aa		4.28	□□□□□ -1.72
VMA8	YEL051W	YIL108W	P40483	696 aa	Known RBP	4.28	□□□□□ -1.72
VMA8	YEL051W	MSD1	P15179	658 aa	Known RBP	4.27	□□□□□ -1.73
VMA8	YEL051W	HSP60	P19882	572 aa	Known RBP	4.27	□□□□□ -1.73
VMA8	YEL051W	PET10	P36139	283 aa		4.27	□□□□□ -1.73
VMA8	YEL051W	CEP3	P40969	608 aa		4.27	□□□□□ -1.73
VMA8	YEL051W	HDA1	P53973	706 aa		4.27	□□□□□ -1.73
VMA8	YEL051W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	not detected
VMA8	YEL051W	AIM44	Q99299	758 aa		4.27	□□□□□ -1.73
VMA8	YEL051W	CIT1	P00890	479 aa		4.26	□□□□□ -1.73
VMA8	YEL051W	TYE7	P33122	291 aa	Predicted RBP	4.26	□□□□□ -1.73
VMA8	YEL051W	OCA5	P38738	679 aa		4.26	□□□□□ -1.73
VMA8	YEL051W	CHS7	P38843	316 aa		4.26	□□□□□ -1.73
VMA8	YEL051W	SDP1	P40479	209 aa		4.26	□□□□□ -1.73
VMA8	YEL051W	TIM54	P47045	478 aa		4.26	□□□□□ -1.73
VMA8	YEL051W	YGR125W	P53273	1036 aa		4.26	□□□□□ -1.73
VMA8	YEL051W	ORC1	P54784	914 aa	Predicted RBP	4.26	□□□□□ -1.73
VMA8	YEL051W	CTF4	Q01454	927 aa		4.26	□□□□□ -1.73
VMA8	YEL051W	YKR011C	Q02209	353 aa		4.26	□□□□□ -1.73
VMA8	YEL051W	TOP3	P13099	656 aa		4.25	□□□□□ -1.73
VMA8	YEL051W	YJL049W	P47048	450 aa		4.25	□□□□□ -1.73
VMA8	YEL051W	SLU7	Q02775	382 aa	Known RBP	4.25	□□□□□ -1.73
VMA8	YEL051W	YOL098C	Q12496	1037 aa		4.25	□□□□□ -1.73
VMA8	YEL051W	MPH2	P0CD99	609 aa		4.24	□□□□□ -1.73
VMA8	YEL051W	URA1	P28272	314 aa	Predicted RBP	4.24	□□□□□ -1.73
VMA8	YEL051W	EFT1	P32324	842 aa	Known RBP	4.24	□□□□□ -1.73
VMA8	YEL051W	YHR020W	P38708	688 aa	Known RBP	4.24	□□□□□ -1.73
VMA8	YEL051W	HUL4	P40985	892 aa		4.24	□□□□□ -1.73
VMA8	YEL051W	BUL1	P48524	976 aa		4.24	□□□□□ -1.73
VMA8	YEL051W	TAF8	Q03750	510 aa		4.24	□□□□□ -1.73
VMA8	YEL051W	FLC1	Q08967	793 aa		4.24	□□□□□ -1.73
VMA8	YEL051W	ENV7	Q12003	364 aa		4.24	□□□□□ -1.73
VMA8	YEL051W	TRP4	P07285	380 aa	Predicted RBP	4.23	□□□□□ -1.73
VMA8	YEL051W	SEC21	P32074	935 aa	Known RBP	4.23	□□□□□ -1.73
VMA8	YEL051W	SRP40	P32583	406 aa	Predicted RBP	4.23	□□□□□ -1.73
VMA8	YEL051W	CTF8	P38877	133 aa		4.23	□□□□□ -1.73
VMA8	YEL051W	UBP6	P43593	499 aa	Known RBP	4.23	□□□□□ -1.73
VMA8	YEL051W	HUL5	P53119	910 aa		4.23	□□□□□ -1.73
VMA8	YEL051W	PEX19	Q07418	342 aa		4.23	□□□□□ -1.73
VMA8	YEL051W	YDL124W	Q07551	312 aa	Known RBP	4.23	□□□□□ -1.73
VMA8	YEL051W	RPS9A	O13516	197 aa	Known RBP	4.22	□□□□□ -1.73
VMA8	YEL051W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
VMA8	YEL051W	NIT3	P49954	291 aa		4.22	□□□□□ -1.73
VMA8	YEL051W	NOG2	P53742	486 aa	Known RBP	4.22	□□□□□ -1.73
VMA8	YEL051W	YLR040C	Q07988	224 aa		4.22	□□□□□ -1.73
VMA8	YEL051W	SWM1	Q12379	170 aa		4.22	□□□□□ -1.73
VMA8	YEL051W	YTA7	P40340	1379 aa		4.22	□□□□□ -1.73
VMA8	YEL051W	ERG4	P25340	473 aa		4.21	□□□□□ -1.74
VMA8	YEL051W	CYS3	P31373	394 aa	Known RBP	4.21	□□□□□ -1.74
VMA8	YEL051W	KTR4	P38131	464 aa		4.21	□□□□□ -1.74
VMA8	YEL051W	RSP5	P39940	809 aa	Known RBP	4.21	□□□□□ -1.74
VMA8	YEL051W	ERG5	P54781	538 aa		4.21	□□□□□ -1.74
VMA8	YEL051W	YOL073C	Q08232	322 aa		4.21	□□□□□ -1.74
VMA8	YEL051W	TOM70	P07213	617 aa	Known RBP	4.2	□□□□□ -1.74
VMA8	YEL051W	TUB3	P09734	445 aa	Known RBP	4.2	□□□□□ -1.74
VMA8	YEL051W	YKL091C	P33324	310 aa	Known RBP	4.2	□□□□□ -1.74
VMA8	YEL051W	CTF13	P35203	478 aa		4.2	□□□□□ -1.74
VMA8	YEL051W	BET3	P36149	193 aa		4.2	□□□□□ -1.74
VMA8	YEL051W	SUL1	P38359	859 aa		4.2	□□□□□ -1.74
VMA8	YEL051W	YHR078W	P38799	552 aa		4.2	□□□□□ -1.74
VMA8	YEL051W	PUS2	P53167	370 aa		4.2	□□□□□ -1.74
VMA8	YEL051W	YGR283C	P53336	341 aa	Predicted RBP	4.2	□□□□□ -1.74
VMA8	YEL051W	CDC53	Q12018	815 aa	Known RBP	4.2	□□□□□ -1.74
VMA8	YEL051W	CAN1	P04817	590 aa		4.19	□□□□□ -1.74
VMA8	YEL051W	DAL7	P21826	554 aa		4.19	□□□□□ -1.74
VMA8	YEL051W	EMC3	P36039	253 aa		4.19	□□□□□ -1.74
VMA8	YEL051W	GGA2	P38817	585 aa	Known RBP	4.19	□□□□□ -1.74
VMA8	YEL051W	GYP8	P43570	497 aa		4.19	□□□□□ -1.74
VMA8	YEL051W	DAM1	P53267	343 aa		4.19	□□□□□ -1.74
VMA8	YEL051W	NSE3	Q05541	303 aa		4.19	□□□□□ -1.74
VMA8	YEL051W	BDF2	Q07442	638 aa		4.19	□□□□□ -1.74
VMA8	YEL051W	TRM11	Q12463	433 aa		4.19	□□□□□ -1.74
VMA8	YEL051W	RTA1	P53047	317 aa		4.18	□□□□□ -1.74
VMA8	YEL051W	YRB30	P53107	440 aa	Predicted RBP	4.18	□□□□□ -1.74
VMA8	YEL051W	DUS1	P53759	423 aa	Known RBP	4.18	□□□□□ -1.74
VMA8	YEL051W	HAL9	Q12180	1030 aa		4.18	□□□□□ -1.74
VMA8	YEL051W	TRM13	Q12383	476 aa		4.18	□□□□□ -1.74
VMA8	YEL051W	YOR131C	Q12486	218 aa		4.18	□□□□□ -1.74
VMA8	YEL051W	ALG7	P07286	448 aa		4.17	□□□□□ -1.74
VMA8	YEL051W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
VMA8	YEL051W	PRP4	P20053	465 aa	Known RBP	4.17	□□□□□ -1.74
VMA8	YEL051W	RAD53	P22216	821 aa		4.17	□□□□□ -1.74
VMA8	YEL051W	YCL002C	P25565	263 aa		4.17	□□□□□ -1.74
VMA8	YEL051W	OAR1	P35731	278 aa		4.17	□□□□□ -1.74
VMA8	YEL051W	MOH1	P38191	138 aa		4.17	□□□□□ -1.74
VMA8	YEL051W	VHR1	P40522	640 aa		4.17	□□□□□ -1.74
VMA8	YEL051W	ALG2	P43636	503 aa		4.17	□□□□□ -1.74
VMA8	YEL051W	TAD1	P53065	400 aa		4.17	□□□□□ -1.74
VMA8	YEL051W	ASI2	P53895	289 aa		4.17	□□□□□ -1.74
VMA8	YEL051W	RNT1	Q02555	471 aa		4.17	□□□□□ -1.74
VMA8	YEL051W	LRS4	Q04087	347 aa	Known RBP	4.17	□□□□□ -1.74
VMA8	YEL051W	PPM2	Q08282	695 aa		4.17	□□□□□ -1.74
VMA8	YEL051W	YOR022C	Q12204	715 aa		4.17	□□□□□ -1.74
VMA8	YEL051W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
VMA8	YEL051W	RPP1	P38786	293 aa		4.16	□□□□□ -1.74
VMA8	YEL051W	YDR514C	Q04408	483 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 38.2 ms