RNA–Protein interactions for RNA: YDR443C

SSN2, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SSN2, Length 4,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN2YDR443C IMP2'P32351 346 aa2.94□□□□□ -1.94
SSN2YDR443C RGA1P39083 1007 aa2.94□□□□□ -1.94
SSN2YDR443C YIL166CP40445 542 aa2.94□□□□□ -1.94
SSN2YDR443C CIT3P43635 486 aa2.94□□□□□ -1.94
SSN2YDR443C KEL2P50090 882 aa2.94□□□□□ -1.94
SSN2YDR443C YAP1802P53309 568 aa2.94□□□□□ -1.94
SSN2YDR443C VTC3Q02725 835 aa2.94□□□□□ -1.94
SSN2YDR443C AGE1Q04412 482 aa2.94□□□□□ -1.94
SSN2YDR443C SRD1P09007 221 aa2.93□□□□□ -1.94
SSN2YDR443C MET8P15807 274 aa2.93□□□□□ -1.94
SSN2YDR443C MNE1P24720 663 aa2.93□□□□□ -1.94
SSN2YDR443C YKL100CP34248 587 aa2.93□□□□□ -1.94
SSN2YDR443C TPA1P40032 644 aaKnown RBP2.93□□□□□ -1.94
SSN2YDR443C TAD1P53065 400 aa2.93□□□□□ -1.94
SSN2YDR443C NFI1Q12216 726 aa2.93□□□□□ -1.94
SSN2YDR443C RAM1P22007 431 aa2.93□□□□□ -1.94
SSN2YDR443C MSH1P25846 959 aa2.93□□□□□ -1.94
SSN2YDR443C BIT2P38346 545 aa2.93□□□□□ -1.94
SSN2YDR443C FIR1P40020 876 aa2.93□□□□□ -1.94
SSN2YDR443C YGL176CP46945 554 aa2.93□□□□□ -1.94
SSN2YDR443C EAR1Q03212 550 aa2.93□□□□□ -1.94
SSN2YDR443C PRP42Q03776 544 aaKnown RBP2.93□□□□□ -1.94
SSN2YDR443C OPY2Q06810 360 aa2.93□□□□□ -1.94
SSN2YDR443C MRN1Q08925 612 aaKnown RBP RIP-Chip data2.93□□□□□ -1.94not detected
SSN2YDR443C YTM1Q12024 460 aaPredicted RBP2.93□□□□□ -1.94
SSN2YDR443C NUP157P40064 1391 aaKnown RBP2.93□□□□□ -1.94
SSN2YDR443C VMR1P38735 1592 aa2.93□□□□□ -1.94
SSN2YDR443C PDC1P06169 563 aaKnown RBP2.93□□□□□ -1.94
SSN2YDR443C YER152CP10356 443 aa2.93□□□□□ -1.94
SSN2YDR443C UTR2P32623 467 aa2.93□□□□□ -1.94
SSN2YDR443C YKU70P32807 602 aa2.93□□□□□ -1.94
SSN2YDR443C DOM34P33309 386 aa2.93□□□□□ -1.94
SSN2YDR443C PSY2P40164 858 aa2.93□□□□□ -1.94
SSN2YDR443C MID1P41821 548 aa2.93□□□□□ -1.94
SSN2YDR443C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.93□□□□□ -1.94not detected
SSN2YDR443C YMR155WQ03795 547 aa2.93□□□□□ -1.94
SSN2YDR443C HDA2Q06629 674 aa2.93□□□□□ -1.94
SSN2YDR443C SEC7P11075 2009 aaKnown RBP2.93□□□□□ -1.94
SSN2YDR443C STE6P12866 1290 aa2.93□□□□□ -1.94
SSN2YDR443C MSD1P15179 658 aaKnown RBP2.93□□□□□ -1.94
SSN2YDR443C COX11P19516 300 aaKnown RBP2.93□□□□□ -1.94
SSN2YDR443C PCL2P25693 308 aa2.93□□□□□ -1.94
SSN2YDR443C SMY2P32909 740 aaKnown RBP2.93□□□□□ -1.94
SSN2YDR443C SLC1P33333 303 aa2.93□□□□□ -1.94
SSN2YDR443C LRP1P38801 184 aaKnown RBP2.93□□□□□ -1.94
SSN2YDR443C PAC1P39946 494 aaKnown RBP2.93□□□□□ -1.94
SSN2YDR443C SBE2P42223 864 aaKnown RBP2.93□□□□□ -1.94
SSN2YDR443C ISM1P48526 1002 aa2.93□□□□□ -1.94
SSN2YDR443C YDR306CQ06640 478 aa2.93□□□□□ -1.94
SSN2YDR443C MCM1P11746 286 aa2.92□□□□□ -1.94
SSN2YDR443C PET309P32522 965 aaPredicted RBP2.92□□□□□ -1.94
SSN2YDR443C SCT1P32784 759 aa2.92□□□□□ -1.94
SSN2YDR443C SER1P33330 395 aaKnown RBP2.92□□□□□ -1.94
SSN2YDR443C LDH1P38139 375 aa2.92□□□□□ -1.94
SSN2YDR443C CKB2P38930 258 aa2.92□□□□□ -1.94
SSN2YDR443C VPS41P38959 992 aa2.92□□□□□ -1.94
SSN2YDR443C RGD2P43556 714 aa2.92□□□□□ -1.94
SSN2YDR443C FYV8P46949 817 aaKnown RBP2.92□□□□□ -1.94
SSN2YDR443C SET2P46995 733 aaKnown RBP2.92□□□□□ -1.94
SSN2YDR443C VPS53P47061 822 aa2.92□□□□□ -1.94
SSN2YDR443C RIX7Q07844 837 aaKnown RBP2.92□□□□□ -1.94
SSN2YDR443C CUE5Q08412 411 aaKnown RBP2.92□□□□□ -1.94
SSN2YDR443C HVG1P0CE11 249 aa2.92□□□□□ -1.94
SSN2YDR443C HEM12P32347 362 aaPredicted RBP2.92□□□□□ -1.94
SSN2YDR443C MCD4P36051 919 aa2.92□□□□□ -1.94
SSN2YDR443C PEX28P38848 579 aa2.92□□□□□ -1.94
SSN2YDR443C UTP7P40055 554 aaKnown RBP2.92□□□□□ -1.94
SSN2YDR443C DPH1P40487 425 aaKnown RBP2.92□□□□□ -1.94
SSN2YDR443C DUG1P43616 481 aaKnown RBP2.92□□□□□ -1.94
SSN2YDR443C UPF3P48412 387 aaKnown RBP2.92□□□□□ -1.94
SSN2YDR443C ALF1P53904 254 aa2.92□□□□□ -1.94
SSN2YDR443C NUP188P52593 1655 aaKnown RBP2.92□□□□□ -1.94
SSN2YDR443C GFA1P14742 717 aaKnown RBP2.92□□□□□ -1.94
SSN2YDR443C HCA4P20448 770 aaKnown RBP2.92□□□□□ -1.94
SSN2YDR443C MSN1P22148 382 aa2.92□□□□□ -1.94
SSN2YDR443C RPC53P25441 422 aa2.92□□□□□ -1.94
SSN2YDR443C CMK1P27466 446 aaKnown RBP2.92□□□□□ -1.94
SSN2YDR443C DUR3P33413 735 aa2.92□□□□□ -1.94
SSN2YDR443C YEL023CP39992 682 aa2.92□□□□□ -1.94
SSN2YDR443C YGR153WP48238 217 aa2.92□□□□□ -1.94
SSN2YDR443C PAP2P53632 584 aaKnown RBP2.92□□□□□ -1.94
SSN2YDR443C ZDS2P54786 942 aa2.92□□□□□ -1.94
SSN2YDR443C ROD1Q02805 837 aa2.92□□□□□ -1.94
SSN2YDR443C TAF11Q04226 346 aa2.92□□□□□ -1.94
SSN2YDR443C CIA1Q05583 330 aa2.92□□□□□ -1.94
SSN2YDR443C RED1P14291 827 aa2.91□□□□□ -1.94
SSN2YDR443C PAH1P32567 862 aa2.91□□□□□ -1.94
SSN2YDR443C HBS1P32769 611 aaKnown RBP2.91□□□□□ -1.94
SSN2YDR443C RIB7P33312 244 aa2.91□□□□□ -1.94
SSN2YDR443C SEG2P34250 1132 aa2.91□□□□□ -1.94
SSN2YDR443C ERT1P38140 529 aa2.91□□□□□ -1.94
SSN2YDR443C NUT1P53114 1132 aa2.91□□□□□ -1.94
SSN2YDR443C YNR061CP53747 219 aa2.91□□□□□ -1.94
SSN2YDR443C YPL071CQ02864 156 aa2.91□□□□□ -1.94
SSN2YDR443C CLP1Q08685 445 aaPredicted RBP2.91□□□□□ -1.94
SSN2YDR443C REX3Q12090 404 aa2.91□□□□□ -1.94
SSN2YDR443C MET17P06106 444 aa2.91□□□□□ -1.94
SSN2YDR443C SRO9P25567 434 aaKnown RBP2.91□□□□□ -1.94
SSN2YDR443C IRS4P36115 615 aaKnown RBP2.91□□□□□ -1.94
SSN2YDR443C YBR238CP38330 731 aaKnown RBP2.91□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 42.5 ms