RNA–Protein interactions for RNA: YDR422C

SIP1, Transcript of Alternate beta-subunit of the Snf1p kinase complex, yeast

Gene SIP1, Length 2,448 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIP1	YDR422C	SGD1	Q06132	899 aa		4.57	□□□□□ -1.68
SIP1	YDR422C	YLR345W	Q06137	509 aa		4.57	□□□□□ -1.68
SIP1	YDR422C	YLR352W	Q06479	807 aa		4.57	□□□□□ -1.68
SIP1	YDR422C	ENV7	Q12003	364 aa		4.57	□□□□□ -1.68
SIP1	YDR422C	AAD3	P25612	363 aa		4.56	□□□□□ -1.68
SIP1	YDR422C	MLS1	P30952	554 aa		4.56	□□□□□ -1.68
SIP1	YDR422C	SPT16	P32558	1035 aa	Known RBP	4.56	□□□□□ -1.68
SIP1	YDR422C	VPH1	P32563	840 aa	Known RBP	4.56	□□□□□ -1.68
SIP1	YDR422C	TFC3	P34111	1160 aa		4.56	□□□□□ -1.68
SIP1	YDR422C	TIF11	P38912	153 aa	Known RBP	4.56	□□□□□ -1.68
SIP1	YDR422C	NOP16	P40007	231 aa	Known RBP	4.56	□□□□□ -1.68
SIP1	YDR422C	HOS2	P53096	452 aa	Predicted RBP	4.56	□□□□□ -1.68
SIP1	YDR422C	YDR131C	Q03899	556 aa		4.56	□□□□□ -1.68
SIP1	YDR422C	UTP21	Q06078	939 aa	Predicted RBP	4.56	□□□□□ -1.68
SIP1	YDR422C	OMS1	Q06668	471 aa		4.56	□□□□□ -1.68
SIP1	YDR422C	TSR2	Q06672	205 aa	Known RBP	4.56	□□□□□ -1.68
SIP1	YDR422C	GUD1	Q07729	489 aa		4.56	□□□□□ -1.68
SIP1	YDR422C	APM4	Q99186	491 aa		4.56	□□□□□ -1.68
SIP1	YDR422C	INO80	P53115	1489 aa		4.56	□□□□□ -1.68
SIP1	YDR422C	HTS1	P07263	546 aa	Known RBP	4.56	□□□□□ -1.68
SIP1	YDR422C	IDI1	P15496	288 aa		4.56	□□□□□ -1.68
SIP1	YDR422C	RPC53	P25441	422 aa		4.56	□□□□□ -1.68
SIP1	YDR422C	KRR1	P25586	316 aa	Predicted RBP	4.56	□□□□□ -1.68
SIP1	YDR422C	SEC61	P32915	480 aa		4.56	□□□□□ -1.68
SIP1	YDR422C	DOM34	P33309	386 aa		4.56	□□□□□ -1.68
SIP1	YDR422C	STE13	P33894	931 aa		4.56	□□□□□ -1.68
SIP1	YDR422C	MDJ1	P35191	511 aa		4.56	□□□□□ -1.68
SIP1	YDR422C	OAF3	P36023	863 aa		4.56	□□□□□ -1.68
SIP1	YDR422C	EAF5	P39995	279 aa		4.56	□□□□□ -1.68
SIP1	YDR422C	GPD2	P41911	440 aa	Known RBP	4.56	□□□□□ -1.68
SIP1	YDR422C	YFL054C	P43549	646 aa		4.56	□□□□□ -1.68
SIP1	YDR422C	EST2	Q06163	884 aa		4.56	□□□□□ -1.68
SIP1	YDR422C	YDR306C	Q06640	478 aa		4.56	□□□□□ -1.68
SIP1	YDR422C	OPY2	Q06810	360 aa		4.56	□□□□□ -1.68
SIP1	YDR422C	SCM3	Q12334	223 aa		4.56	□□□□□ -1.68
SIP1	YDR422C	TCB1	Q12466	1186 aa		4.56	□□□□□ -1.68
SIP1	YDR422C	RMP1	Q12530	201 aa		4.56	□□□□□ -1.68
SIP1	YDR422C	CBP3	P21560	335 aa		4.55	□□□□□ -1.68
SIP1	YDR422C	CDC12	P32468	407 aa	Known RBP	4.55	□□□□□ -1.68
SIP1	YDR422C	RTG1	P32607	177 aa		4.55	□□□□□ -1.68
SIP1	YDR422C	PSY4	P38193	441 aa		4.55	□□□□□ -1.68
SIP1	YDR422C	RRF1	P38771	230 aa		4.55	□□□□□ -1.68
SIP1	YDR422C	LAM1	P38851	1228 aa		4.55	□□□□□ -1.68
SIP1	YDR422C	TMA108	P40462	946 aa		4.55	□□□□□ -1.68
SIP1	YDR422C	YML082W	Q04533	649 aa	Known RBP	4.55	□□□□□ -1.68
SIP1	YDR422C	DCS2	Q12123	353 aa		4.55	□□□□□ -1.68
SIP1	YDR422C	PFK1	P16861	987 aa	Known RBP	4.55	□□□□□ -1.68
SIP1	YDR422C	IFA38	P38286	347 aa		4.55	□□□□□ -1.68
SIP1	YDR422C	CCT3	P39077	534 aa	Known RBP	4.55	□□□□□ -1.68
SIP1	YDR422C	MSN5	P52918	1224 aa		4.55	□□□□□ -1.68
SIP1	YDR422C	ARP4	P80428	489 aa		4.55	□□□□□ -1.68
SIP1	YDR422C	SYH1	Q02875	849 aa	Known RBP	4.55	□□□□□ -1.68
SIP1	YDR422C	SRC1	Q03707	834 aa		4.55	□□□□□ -1.68
SIP1	YDR422C	YDL129W	Q07555	291 aa		4.55	□□□□□ -1.68
SIP1	YDR422C	PEX15	Q08215	383 aa		4.55	□□□□□ -1.68
SIP1	YDR422C	GYP1	Q08484	637 aa		4.55	□□□□□ -1.68
SIP1	YDR422C	GUP2	Q08929	609 aa		4.55	□□□□□ -1.68
SIP1	YDR422C	ADP1	P25371	1049 aa		4.54	□□□□□ -1.68
SIP1	YDR422C	BRF1	P29056	596 aa		4.54	□□□□□ -1.68
SIP1	YDR422C	ALG3	P38179	458 aa		4.54	□□□□□ -1.68
SIP1	YDR422C	YER156C	P40093	338 aa	Known RBP	4.54	□□□□□ -1.68
SIP1	YDR422C	VHR1	P40522	640 aa		4.54	□□□□□ -1.68
SIP1	YDR422C	YJR124C	P47159	448 aa		4.54	□□□□□ -1.68
SIP1	YDR422C	UBC9	P50623	157 aa	Predicted RBP	4.54	□□□□□ -1.68
SIP1	YDR422C	HRQ1	Q05549	1077 aa		4.54	□□□□□ -1.68
SIP1	YDR422C	FUS1	P11710	512 aa		4.54	□□□□□ -1.68
SIP1	YDR422C	GSY1	P23337	708 aa		4.54	□□□□□ -1.68
SIP1	YDR422C	PER1	P25625	357 aa		4.54	□□□□□ -1.68
SIP1	YDR422C	ERG3	P32353	365 aa		4.54	□□□□□ -1.68
SIP1	YDR422C	TSL1	P38427	1098 aa	Known RBP	4.54	□□□□□ -1.68
SIP1	YDR422C	CAJ1	P39101	391 aa		4.54	□□□□□ -1.68
SIP1	YDR422C	YKE2	P52553	114 aa		4.54	□□□□□ -1.68
SIP1	YDR422C	BIO5	P53744	561 aa	Known RBP	4.54	□□□□□ -1.68
SIP1	YDR422C	SKY1	Q03656	742 aa		4.54	□□□□□ -1.68
SIP1	YDR422C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	RIP-Chip
SIP1	YDR422C	LDB19	Q12502	818 aa		4.54	□□□□□ -1.68
SIP1	YDR422C	SWI6	P09959	803 aa		4.53	□□□□□ -1.68
SIP1	YDR422C	RPL11A	P0C0W9	174 aa	Known RBP	4.53	□□□□□ -1.68
SIP1	YDR422C	MTF2	P10849	440 aa		4.53	□□□□□ -1.68
SIP1	YDR422C	SMY2	P32909	740 aa	Known RBP	4.53	□□□□□ -1.68
SIP1	YDR422C	JNM1	P36224	373 aa		4.53	□□□□□ -1.68
SIP1	YDR422C	NPR2	P39923	615 aa		4.53	□□□□□ -1.68
SIP1	YDR422C	MXR1	P40029	184 aa		4.53	□□□□□ -1.68
SIP1	YDR422C	FMP10	P40098	244 aa		4.53	□□□□□ -1.68
SIP1	YDR422C	BFA1	P47113	574 aa		4.53	□□□□□ -1.68
SIP1	YDR422C	SRP1	Q02821	542 aa	Known RBP	4.53	□□□□□ -1.68
SIP1	YDR422C	LCD1	Q04377	747 aa		4.53	□□□□□ -1.68
SIP1	YDR422C	HIM1	Q06674	414 aa		4.53	□□□□□ -1.68
SIP1	YDR422C	MET7	Q08645	548 aa		4.53	□□□□□ -1.68
SIP1	YDR422C	RPL11B	Q3E757	174 aa	Predicted RBP	4.53	□□□□□ -1.68
SIP1	YDR422C	CPA2	P03965	1118 aa	Known RBP	4.53	□□□□□ -1.68
SIP1	YDR422C	DAL7	P21826	554 aa		4.53	□□□□□ -1.68
SIP1	YDR422C	RET1	P22276	1149 aa	Known RBP	4.53	□□□□□ -1.68
SIP1	YDR422C	KNS1	P32350	737 aa	Predicted RBP	4.53	□□□□□ -1.68
SIP1	YDR422C	YKU70	P32807	602 aa		4.53	□□□□□ -1.68
SIP1	YDR422C	ADD66	P36040	267 aa		4.53	□□□□□ -1.68
SIP1	YDR422C	MCM7	P38132	845 aa		4.53	□□□□□ -1.68
SIP1	YDR422C	MTC3	P53077	123 aa		4.53	□□□□□ -1.68
SIP1	YDR422C	VTI1	Q04338	217 aa		4.53	□□□□□ -1.68
SIP1	YDR422C	HAL9	Q12180	1030 aa		4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 84.5 ms