RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W AIM14P53109 570 aa1.6□□□□□ -2.15
MSN5YDR335W SRP1Q02821 542 aaKnown RBP1.6□□□□□ -2.15
MSN5YDR335W SVL3Q03088 825 aaKnown RBP1.6□□□□□ -2.15
MSN5YDR335W YHM2Q04013 314 aa1.6□□□□□ -2.15
MSN5YDR335W SXM1Q04175 944 aaKnown RBP1.6□□□□□ -2.15
MSN5YDR335W SMC4Q12267 1418 aa1.6□□□□□ -2.15
MSN5YDR335W SES1P07284 462 aaKnown RBP1.6□□□□□ -2.15
MSN5YDR335W PDC5P16467 563 aaKnown RBP1.6□□□□□ -2.15
MSN5YDR335W YCK2P23292 546 aaKnown RBP1.6□□□□□ -2.15
MSN5YDR335W MEF1P25039 761 aa1.6□□□□□ -2.15
MSN5YDR335W NAM7P30771 971 aaKnown RBP1.6□□□□□ -2.15
MSN5YDR335W MCM10P32354 571 aa1.6□□□□□ -2.15
MSN5YDR335W VMA8P32610 256 aaKnown RBP1.6□□□□□ -2.15
MSN5YDR335W PEX5P35056 612 aa1.6□□□□□ -2.15
MSN5YDR335W BET3P36149 193 aa1.6□□□□□ -2.15
MSN5YDR335W OMA1P36163 345 aa1.6□□□□□ -2.15
MSN5YDR335W GIP1P38229 639 aa1.6□□□□□ -2.15
MSN5YDR335W APM2P38700 605 aa1.6□□□□□ -2.15
MSN5YDR335W BFA1P47113 574 aa1.6□□□□□ -2.15
MSN5YDR335W COG6P53959 839 aa1.6□□□□□ -2.15
MSN5YDR335W GTR1Q00582 310 aa1.6□□□□□ -2.15
MSN5YDR335W YDR056CQ12025 205 aa1.6□□□□□ -2.15
MSN5YDR335W NSI1Q12457 570 aa1.6□□□□□ -2.15
MSN5YDR335W TRP2P00899 507 aaKnown RBP1.6□□□□□ -2.15
MSN5YDR335W PRP9P19736 530 aaKnown RBP1.6□□□□□ -2.15
MSN5YDR335W YBR071WP38243 211 aa1.6□□□□□ -2.15
MSN5YDR335W RXT2P38255 430 aa1.6□□□□□ -2.15
MSN5YDR335W PEX28P38848 579 aa1.6□□□□□ -2.15
MSN5YDR335W MXR1P40029 184 aa1.6□□□□□ -2.15
MSN5YDR335W PIC2P40035 300 aa1.6□□□□□ -2.15
MSN5YDR335W IRR1P40541 1150 aa1.6□□□□□ -2.15
MSN5YDR335W YJR096WP47137 282 aa1.6□□□□□ -2.15
MSN5YDR335W VTI1Q04338 217 aa1.6□□□□□ -2.15
MSN5YDR335W VIP1Q06685 1146 aaKnown RBP1.6□□□□□ -2.15
MSN5YDR335W YOL087CQ99247 1116 aa1.6□□□□□ -2.15
MSN5YDR335W PIF1P07271 859 aa1.59□□□□□ -2.15
MSN5YDR335W PRP5P21372 849 aaPredicted RBP1.59□□□□□ -2.15
MSN5YDR335W YBT1P32386 1661 aa1.59□□□□□ -2.15
MSN5YDR335W LYP1P32487 611 aa1.59□□□□□ -2.15
MSN5YDR335W SNQ2P32568 1501 aaKnown RBP1.59□□□□□ -2.15
MSN5YDR335W SLC1P33333 303 aa1.59□□□□□ -2.15
MSN5YDR335W YKL107WP34251 309 aa1.59□□□□□ -2.15
MSN5YDR335W SAP190P36123 1033 aa1.59□□□□□ -2.15
MSN5YDR335W PBY1P38254 753 aa1.59□□□□□ -2.15
MSN5YDR335W PPE1P38796 400 aa1.59□□□□□ -2.15
MSN5YDR335W GIP2P40036 548 aa1.59□□□□□ -2.15
MSN5YDR335W MEP1P40260 492 aa1.59□□□□□ -2.15
MSN5YDR335W GPD2P41911 440 aaKnown RBP1.59□□□□□ -2.15
MSN5YDR335W YML131WQ03102 365 aa1.59□□□□□ -2.15
MSN5YDR335W ECM38Q05902 660 aaPredicted RBP1.59□□□□□ -2.15
MSN5YDR335W AVO1Q08236 1176 aa1.59□□□□□ -2.15
MSN5YDR335W TMA46Q12000 345 aaKnown RBP1.59□□□□□ -2.15
MSN5YDR335W SMC6Q12749 1114 aa1.59□□□□□ -2.15
MSN5YDR335W SRD1P09007 221 aa1.59□□□□□ -2.16
MSN5YDR335W DAL5P15365 543 aa1.59□□□□□ -2.16
MSN5YDR335W SAC7P17121 654 aa1.59□□□□□ -2.16
MSN5YDR335W SRP72P38688 640 aaKnown RBP1.59□□□□□ -2.16
MSN5YDR335W VTC4P47075 721 aa1.59□□□□□ -2.16
MSN5YDR335W BNA2P47125 453 aa1.59□□□□□ -2.16
MSN5YDR335W YGR153WP48238 217 aa1.59□□□□□ -2.16
MSN5YDR335W RPT6Q01939 405 aaKnown RBP1.59□□□□□ -2.16
MSN5YDR335W ADI1Q03677 179 aa1.59□□□□□ -2.16
MSN5YDR335W GYL1Q04322 720 aa1.59□□□□□ -2.16
MSN5YDR335W IRC3Q06683 689 aa1.59□□□□□ -2.16
MSN5YDR335W MCH5Q08777 521 aa1.59□□□□□ -2.16
MSN5YDR335W RMP1Q12530 201 aa1.59□□□□□ -2.16
MSN5YDR335W DRS2P39524 1355 aa1.59□□□□□ -2.16
MSN5YDR335W AEP2P22136 580 aa1.59□□□□□ -2.16
MSN5YDR335W DBF4P32325 704 aa1.59□□□□□ -2.16
MSN5YDR335W YKU70P32807 602 aa1.59□□□□□ -2.16
MSN5YDR335W JJJ3P47138 172 aa1.59□□□□□ -2.16
MSN5YDR335W ROD1Q02805 837 aa1.59□□□□□ -2.16
MSN5YDR335W EEB1Q02891 456 aa1.59□□□□□ -2.16
MSN5YDR335W BUL2Q03758 920 aaKnown RBP1.59□□□□□ -2.16
MSN5YDR335W SPP382Q06411 708 aaPredicted RBP1.59□□□□□ -2.16
MSN5YDR335W RSC2Q06488 889 aa1.59□□□□□ -2.16
MSN5YDR335W CMR1Q12510 522 aaKnown RBP1.59□□□□□ -2.16
MSN5YDR335W CDC9P04819 755 aa1.58□□□□□ -2.16
MSN5YDR335W ENA1P13587 1091 aa1.58□□□□□ -2.16
MSN5YDR335W PFK2P16862 959 aaKnown RBP RIP-Chip data1.58□□□□□ -2.16not detected
MSN5YDR335W SFL1P20134 766 aa1.58□□□□□ -2.16
MSN5YDR335W SAN1P22470 610 aa1.58□□□□□ -2.16
MSN5YDR335W HSP78P33416 811 aa1.58□□□□□ -2.16
MSN5YDR335W CCT8P47079 568 aaKnown RBP1.58□□□□□ -2.16
MSN5YDR335W UBC9P50623 157 aaPredicted RBP1.58□□□□□ -2.16
MSN5YDR335W MRPL19P53875 158 aa1.58□□□□□ -2.16
MSN5YDR335W ENA2Q01896 1091 aa1.58□□□□□ -2.16
MSN5YDR335W EAR1Q03212 550 aa1.58□□□□□ -2.16
MSN5YDR335W TLG1Q03322 224 aa1.58□□□□□ -2.16
MSN5YDR335W UGO1Q03327 502 aa1.58□□□□□ -2.16
MSN5YDR335W HEL2Q05580 639 aaKnown RBP1.58□□□□□ -2.16
MSN5YDR335W CRR1Q05790 422 aa1.58□□□□□ -2.16
MSN5YDR335W DUS3Q06053 668 aaKnown RBP1.58□□□□□ -2.16
MSN5YDR335W BLS1Q06071 122 aa1.58□□□□□ -2.16
MSN5YDR335W YOR296WQ08748 1289 aa1.58□□□□□ -2.16
MSN5YDR335W YOR352WQ08816 343 aa1.58□□□□□ -2.16
MSN5YDR335W ENA5Q12691 1091 aa1.58□□□□□ -2.16
MSN5YDR335W ATP4P05626 244 aa1.58□□□□□ -2.16
MSN5YDR335W GLK1P17709 500 aaKnown RBP1.58□□□□□ -2.16
MSN5YDR335W TRX1P22217 103 aaKnown RBP1.58□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 149.2 ms