RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W ERT1P38140 529 aa3.91□□□□□ -1.78
SSF2YDR312W YBR284WP38150 797 aa3.91□□□□□ -1.78
SSF2YDR312W MSS4P38994 779 aa3.91□□□□□ -1.78
SSF2YDR312W SLI1P53304 468 aa3.91□□□□□ -1.78
SSF2YDR312W ENB1Q08299 606 aa3.91□□□□□ -1.78
SSF2YDR312W GUP2Q08929 609 aa3.91□□□□□ -1.78
SSF2YDR312W RSP5P39940 809 aaKnown RBP3.9□□□□□ -1.78
SSF2YDR312W KIN4Q01919 800 aa3.9□□□□□ -1.78
SSF2YDR312W BUL2Q03758 920 aaKnown RBP3.9□□□□□ -1.78
SSF2YDR312W YPR071WQ12346 211 aa3.9□□□□□ -1.78
SSF2YDR312W LAS17Q12446 633 aa3.9□□□□□ -1.78
SSF2YDR312W HBN1Q96VH4 193 aa3.9□□□□□ -1.78
SSF2YDR312W TOP3P13099 656 aa3.89□□□□□ -1.79
SSF2YDR312W KAR4P25583 335 aa3.89□□□□□ -1.79
SSF2YDR312W HRR25P29295 494 aaKnown RBP3.89□□□□□ -1.79
SSF2YDR312W YKL091CP33324 310 aaKnown RBP3.89□□□□□ -1.79
SSF2YDR312W STE13P33894 931 aa3.89□□□□□ -1.79
SSF2YDR312W CHS7P38843 316 aa3.89□□□□□ -1.79
SSF2YDR312W CCM1P48237 864 aaPredicted RBP3.89□□□□□ -1.79
SSF2YDR312W NPL3Q01560 414 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
SSF2YDR312W TAF8Q03750 510 aa3.89□□□□□ -1.79
SSF2YDR312W LCD1Q04377 747 aa3.89□□□□□ -1.79
SSF2YDR312W AIM39Q08223 395 aa3.89□□□□□ -1.79
SSF2YDR312W MSD1P15179 658 aaKnown RBP3.89□□□□□ -1.79
SSF2YDR312W SED4P25365 1065 aa3.89□□□□□ -1.79
SSF2YDR312W CDC11P32458 415 aa3.89□□□□□ -1.79
SSF2YDR312W STE14P32584 239 aa3.89□□□□□ -1.79
SSF2YDR312W SCT1P32784 759 aa3.89□□□□□ -1.79
SSF2YDR312W CTF4Q01454 927 aa3.89□□□□□ -1.79
SSF2YDR312W VPS30Q02948 557 aa3.89□□□□□ -1.79
SSF2YDR312W SSL1Q04673 461 aaPredicted RBP3.89□□□□□ -1.79
SSF2YDR312W PPM2Q08282 695 aa3.89□□□□□ -1.79
SSF2YDR312W YTA7P40340 1379 aa3.88□□□□□ -1.79
SSF2YDR312W CAN1P04817 590 aa3.88□□□□□ -1.79
SSF2YDR312W FBP1P09201 348 aa3.88□□□□□ -1.79
SSF2YDR312W BET3P36149 193 aa3.88□□□□□ -1.79
SSF2YDR312W PBP2P38151 413 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
SSF2YDR312W TOK1P40310 691 aa3.88□□□□□ -1.79
SSF2YDR312W HUL4P40985 892 aa3.88□□□□□ -1.79
SSF2YDR312W BUD6P41697 788 aa3.88□□□□□ -1.79
SSF2YDR312W RTA1P53047 317 aa3.88□□□□□ -1.79
SSF2YDR312W RPN4Q03465 531 aa3.88□□□□□ -1.79
SSF2YDR312W YOR131CQ12486 218 aa3.88□□□□□ -1.79
SSF2YDR312W RFA1P22336 621 aaKnown RBP3.87□□□□□ -1.79
SSF2YDR312W CAD1P24813 409 aaKnown RBP3.87□□□□□ -1.79
SSF2YDR312W REC104P33323 182 aa3.87□□□□□ -1.79
SSF2YDR312W PET10P36139 283 aa3.87□□□□□ -1.79
SSF2YDR312W YDL124WQ07551 312 aaKnown RBP3.87□□□□□ -1.79
SSF2YDR312W SPT6P23615 1451 aaKnown RBP3.86□□□□□ -1.79
SSF2YDR312W REV3P14284 1504 aa3.86□□□□□ -1.79
SSF2YDR312W ERR1P0CX10 437 aa3.86□□□□□ -1.79
SSF2YDR312W ERR2P0CX11 437 aa3.86□□□□□ -1.79
SSF2YDR312W GAL11P19659 1081 aa3.86□□□□□ -1.79
SSF2YDR312W EFT1P32324 842 aaKnown RBP3.86□□□□□ -1.79
SSF2YDR312W RPD3P32561 433 aa3.86□□□□□ -1.79
SSF2YDR312W GGA2P38817 585 aaKnown RBP3.86□□□□□ -1.79
SSF2YDR312W BUL1P48524 976 aa3.86□□□□□ -1.79
SSF2YDR312W ORC1P54784 914 aaPredicted RBP3.86□□□□□ -1.79
SSF2YDR312W BUD4P47136 1447 aa3.85□□□□□ -1.79
SSF2YDR312W TOM70P07213 617 aaKnown RBP3.85□□□□□ -1.79
SSF2YDR312W TIM23P32897 222 aa3.85□□□□□ -1.79
SSF2YDR312W SDP1P40479 209 aa3.85□□□□□ -1.79
SSF2YDR312W YIL108WP40483 696 aaKnown RBP3.85□□□□□ -1.79
SSF2YDR312W CEP3P40969 608 aa3.85□□□□□ -1.79
SSF2YDR312W UBP6P43593 499 aaKnown RBP3.85□□□□□ -1.79
SSF2YDR312W YKR011CQ02209 353 aa3.85□□□□□ -1.79
SSF2YDR312W SLU7Q02775 382 aaKnown RBP3.85□□□□□ -1.79
SSF2YDR312W TRP4P07285 380 aaPredicted RBP3.84□□□□□ -1.79
SSF2YDR312W CIT2P08679 460 aa3.84□□□□□ -1.79
SSF2YDR312W URA1P28272 314 aaPredicted RBP3.84□□□□□ -1.79
SSF2YDR312W SEC21P32074 935 aaKnown RBP3.84□□□□□ -1.79
SSF2YDR312W TYE7P33122 291 aaPredicted RBP3.84□□□□□ -1.79
SSF2YDR312W CHZ1P40019 153 aaPredicted RBP3.84□□□□□ -1.79
SSF2YDR312W HDA1P53973 706 aa3.84□□□□□ -1.79
SSF2YDR312W ERG4P25340 473 aa3.83□□□□□ -1.8
SSF2YDR312W KTR4P38131 464 aa3.83□□□□□ -1.8
SSF2YDR312W CTF8P38877 133 aa3.83□□□□□ -1.8
SSF2YDR312W NUP82P40368 713 aa3.83□□□□□ -1.8
SSF2YDR312W YLR040CQ07988 224 aa3.83□□□□□ -1.8
SSF2YDR312W ENV7Q12003 364 aa3.83□□□□□ -1.8
SSF2YDR312W SGS1P35187 1447 aa3.82□□□□□ -1.8
SSF2YDR312W MDS3P53094 1487 aa3.82□□□□□ -1.8
SSF2YDR312W HSL1P34244 1518 aa3.82□□□□□ -1.8
SSF2YDR312W MPH2P0CD99 609 aa3.82□□□□□ -1.8
SSF2YDR312W RAD53P22216 821 aa3.82□□□□□ -1.8
SSF2YDR312W SUL1P38359 859 aa3.82□□□□□ -1.8
SSF2YDR312W JSN1P47135 1091 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
SSF2YDR312W ERG5P54781 538 aa3.82□□□□□ -1.8
SSF2YDR312W PEX19Q07418 342 aa3.82□□□□□ -1.8
SSF2YDR312W YOL073CQ08232 322 aa3.82□□□□□ -1.8
SSF2YDR312W TAD3Q9URQ3 322 aa3.82□□□□□ -1.8
SSF2YDR312W RPS9AO13516 197 aaKnown RBP3.81□□□□□ -1.8
SSF2YDR312W OAR1P35731 278 aa3.81□□□□□ -1.8
SSF2YDR312W FPR4Q06205 392 aaPredicted RBP3.81□□□□□ -1.8
SSF2YDR312W SWM1Q12379 170 aa3.81□□□□□ -1.8
SSF2YDR312W TUB3P09734 445 aaKnown RBP3.8□□□□□ -1.8
SSF2YDR312W PHO8P11491 566 aa3.8□□□□□ -1.8
SSF2YDR312W CTF13P35203 478 aa3.8□□□□□ -1.8
SSF2YDR312W MOH1P38191 138 aa3.8□□□□□ -1.8
SSF2YDR312W YHR078WP38799 552 aa3.8□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 75.8 ms