RNA–Protein interactions for RNA: YDR097C

MSH6, Transcript of Protein required for mismatch repair in mitosis and meiosis, yeastyeast

Gene MSH6, Length 3,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH6YDR097C GID8P40208 455 aa2.12□□□□□ -2.07
MSH6YDR097C HIS6P40545 261 aa2.12□□□□□ -2.07
MSH6YDR097C BFA1P47113 574 aa2.12□□□□□ -2.07
MSH6YDR097C ELA1P53861 379 aaPredicted RBP2.12□□□□□ -2.07
MSH6YDR097C GPR1Q12361 961 aa2.12□□□□□ -2.07
MSH6YDR097C ENT1Q12518 454 aa2.12□□□□□ -2.07
MSH6YDR097C PLC1P32383 869 aa2.11□□□□□ -2.07
MSH6YDR097C PIN4P34217 668 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
MSH6YDR097C ALG3P38179 458 aa2.11□□□□□ -2.07
MSH6YDR097C POL5P39985 1022 aaKnown RBP2.11□□□□□ -2.07
MSH6YDR097C CEP3P40969 608 aa2.11□□□□□ -2.07
MSH6YDR097C TAD1P53065 400 aa2.11□□□□□ -2.07
MSH6YDR097C SPC105P53148 917 aa2.11□□□□□ -2.07
MSH6YDR097C ORC3P54790 616 aa2.11□□□□□ -2.07
MSH6YDR097C ECM38Q05902 660 aaPredicted RBP2.11□□□□□ -2.07
MSH6YDR097C RIM4P38741 713 aa2.11□□□□□ -2.07
MSH6YDR097C SNF7P39929 240 aaKnown RBP2.11□□□□□ -2.07
MSH6YDR097C NUP85P46673 744 aa2.11□□□□□ -2.07
MSH6YDR097C ALY2P47029 1046 aa2.11□□□□□ -2.07
MSH6YDR097C YJR098CP47139 656 aa2.11□□□□□ -2.07
MSH6YDR097C YGR153WP48238 217 aa2.11□□□□□ -2.07
MSH6YDR097C ATP25Q03153 612 aa2.11□□□□□ -2.07
MSH6YDR097C UTP5Q04177 643 aaKnown RBP2.11□□□□□ -2.07
MSH6YDR097C IMH1Q06704 911 aaKnown RBP2.11□□□□□ -2.07
MSH6YDR097C MCH5Q08777 521 aa2.11□□□□□ -2.07
MSH6YDR097C TY1A-BLQ12266 440 aa2.11□□□□□ -2.07
MSH6YDR097C SFL1P20134 766 aa2.11□□□□□ -2.07
MSH6YDR097C NEM1P38757 446 aa2.11□□□□□ -2.07
MSH6YDR097C TDA3P38758 523 aa2.11□□□□□ -2.07
MSH6YDR097C SHU2P38957 223 aa2.11□□□□□ -2.07
MSH6YDR097C ACO2P39533 789 aa2.11□□□□□ -2.07
MSH6YDR097C CAF16P43569 289 aa2.11□□□□□ -2.07
MSH6YDR097C DUG1P43616 481 aaKnown RBP2.11□□□□□ -2.07
MSH6YDR097C YJR124CP47159 448 aa2.11□□□□□ -2.07
MSH6YDR097C MET13P53128 600 aa2.11□□□□□ -2.07
MSH6YDR097C MET14Q02196 202 aa2.11□□□□□ -2.07
MSH6YDR097C TMA64Q04600 565 aaKnown RBP2.11□□□□□ -2.07
MSH6YDR097C EIS1Q05050 843 aaKnown RBP2.11□□□□□ -2.07
MSH6YDR097C TCB1Q12466 1186 aa2.11□□□□□ -2.07
MSH6YDR097C RPS9AO13516 197 aaKnown RBP2.1□□□□□ -2.07
MSH6YDR097C PCL2P25693 308 aa2.1□□□□□ -2.07
MSH6YDR097C FET4P40988 552 aa2.1□□□□□ -2.07
MSH6YDR097C ALG2P43636 503 aa2.1□□□□□ -2.07
MSH6YDR097C COG6P53959 839 aa2.1□□□□□ -2.07
MSH6YDR097C NAM8Q00539 523 aaKnown RBP2.1□□□□□ -2.07
MSH6YDR097C HOS3Q02959 697 aaKnown RBP2.1□□□□□ -2.07
MSH6YDR097C SYT1Q06836 1226 aa2.1□□□□□ -2.07
MSH6YDR097C VHS3Q08438 674 aa2.1□□□□□ -2.07
MSH6YDR097C MRP10O75012 95 aa2.1□□□□□ -2.07
MSH6YDR097C ADE8P04161 214 aa2.1□□□□□ -2.07
MSH6YDR097C RFA1P22336 621 aaKnown RBP2.1□□□□□ -2.07
MSH6YDR097C IMP2'P32351 346 aa2.1□□□□□ -2.07
MSH6YDR097C RGD1P38339 666 aa2.1□□□□□ -2.07
MSH6YDR097C SLN1P39928 1220 aaPredicted RBP2.1□□□□□ -2.07
MSH6YDR097C CCT5P40413 562 aaKnown RBP2.1□□□□□ -2.07
MSH6YDR097C YFL052WP43551 465 aa2.1□□□□□ -2.07
MSH6YDR097C CIA1Q05583 330 aa2.1□□□□□ -2.07
MSH6YDR097C YIL177CP40434 1758 aa2.1□□□□□ -2.07
MSH6YDR097C YJL225CP40889 1758 aa2.1□□□□□ -2.07
MSH6YDR097C PGI1P12709 554 aaKnown RBP2.09□□□□□ -2.07
MSH6YDR097C CDC12P32468 407 aaKnown RBP2.09□□□□□ -2.07
MSH6YDR097C SLA2P33338 968 aa2.09□□□□□ -2.07
MSH6YDR097C NIC96P34077 839 aa2.09□□□□□ -2.07
MSH6YDR097C GLY1P37303 387 aaKnown RBP2.09□□□□□ -2.07
MSH6YDR097C YBR071WP38243 211 aa2.09□□□□□ -2.07
MSH6YDR097C UBP6P43593 499 aaKnown RBP2.09□□□□□ -2.07
MSH6YDR097C CNN1P43618 361 aa2.09□□□□□ -2.07
MSH6YDR097C IML2P47031 731 aa2.09□□□□□ -2.07
MSH6YDR097C MEC3Q02574 474 aa2.09□□□□□ -2.07
MSH6YDR097C GNT1Q12096 491 aa2.09□□□□□ -2.07
MSH6YDR097C RRI2Q12348 645 aa2.09□□□□□ -2.07
MSH6YDR097C SNF5P18480 905 aa2.09□□□□□ -2.07
MSH6YDR097C ERR3P42222 437 aa2.09□□□□□ -2.07
MSH6YDR097C NIT2P47016 307 aa2.09□□□□□ -2.07
MSH6YDR097C YMR265CQ03508 461 aaKnown RBP2.09□□□□□ -2.07
MSH6YDR097C HAS1Q03532 505 aaKnown RBP2.09□□□□□ -2.07
MSH6YDR097C Q0142Q9ZZW4 58 aa2.09□□□□□ -2.07
MSH6YDR097C SCP160P06105 1222 aaKnown RBP RIP-Chip data2.09□□□□□ -2.08 RIP-Chip
MSH6YDR097C DIT1P21623 536 aa2.09□□□□□ -2.08
MSH6YDR097C SCT1P32784 759 aa2.09□□□□□ -2.08
MSH6YDR097C TFC3P34111 1160 aa2.09□□□□□ -2.08
MSH6YDR097C ADD66P36040 267 aa2.09□□□□□ -2.08
MSH6YDR097C EXO84P38261 753 aa2.09□□□□□ -2.08
MSH6YDR097C REI1P38344 393 aaPredicted RBP2.09□□□□□ -2.08
MSH6YDR097C OSH7P38755 437 aa2.09□□□□□ -2.08
MSH6YDR097C NDE1P40215 560 aa2.09□□□□□ -2.08
MSH6YDR097C TED1P40533 473 aa2.09□□□□□ -2.08
MSH6YDR097C YFL054CP43549 646 aa2.09□□□□□ -2.08
MSH6YDR097C BNA2P47125 453 aa2.09□□□□□ -2.08
MSH6YDR097C MDM1Q01846 1127 aa2.09□□□□□ -2.08
MSH6YDR097C RSC2Q06488 889 aa2.09□□□□□ -2.08
MSH6YDR097C NKP1Q12493 238 aa2.09□□□□□ -2.08
MSH6YDR097C ENA1P13587 1091 aa2.08□□□□□ -2.08
MSH6YDR097C DBP2P24783 546 aaKnown RBP2.08□□□□□ -2.08
MSH6YDR097C YKU70P32807 602 aa2.08□□□□□ -2.08
MSH6YDR097C PET10P36139 283 aa2.08□□□□□ -2.08
MSH6YDR097C ABZ1P37254 787 aaPredicted RBP2.08□□□□□ -2.08
MSH6YDR097C UBS1P38290 277 aa2.08□□□□□ -2.08
MSH6YDR097C ENA2Q01896 1091 aa2.08□□□□□ -2.08
MSH6YDR097C MTQ2Q03920 221 aaPredicted RBP2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms