RNA–Protein interactions for RNA: YCR096C

HMRA2, Transcript of Silenced copy of a2 at HMR, yeast

Gene HMRA2, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA2	YCR096C	MUP1	P50276	574 aa		3.51	□□□□□ -1.85
HMRA2	YCR096C	SRP1	Q02821	542 aa	Known RBP	3.51	□□□□□ -1.85
HMRA2	YCR096C	CDC34	P14682	295 aa		3.5	□□□□□ -1.85
HMRA2	YCR096C	KIN3	P22209	435 aa		3.5	□□□□□ -1.85
HMRA2	YCR096C	RPD3	P32561	433 aa		3.5	□□□□□ -1.85
HMRA2	YCR096C	STE13	P33894	931 aa		3.5	□□□□□ -1.85
HMRA2	YCR096C	YIL166C	P40445	542 aa		3.5	□□□□□ -1.85
HMRA2	YCR096C	POL32	P47110	350 aa		3.5	□□□□□ -1.85
HMRA2	YCR096C	YJL163C	P46996	555 aa		3.49	□□□□□ -1.85
HMRA2	YCR096C	SWM1	Q12379	170 aa		3.49	□□□□□ -1.85
HMRA2	YCR096C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	3.48	□□□□□ -1.85	not detected
HMRA2	YCR096C	YBR053C	P38235	358 aa		3.48	□□□□□ -1.85
HMRA2	YCR096C	YGR053C	P53234	283 aa		3.48	□□□□□ -1.85
HMRA2	YCR096C	SPO20	Q04359	397 aa		3.48	□□□□□ -1.85
HMRA2	YCR096C	PRP4	P20053	465 aa	Known RBP	3.47	□□□□□ -1.85
HMRA2	YCR096C	CDC48	P25694	835 aa	Known RBP	3.47	□□□□□ -1.85
HMRA2	YCR096C	YKR078W	P36158	585 aa	Known RBP	3.47	□□□□□ -1.85
HMRA2	YCR096C	RPP1	P38786	293 aa		3.47	□□□□□ -1.85
HMRA2	YCR096C	CTF8	P38877	133 aa		3.47	□□□□□ -1.85
HMRA2	YCR096C	MBP1	P39678	833 aa		3.47	□□□□□ -1.85
HMRA2	YCR096C	MET10	P39692	1035 aa		3.47	□□□□□ -1.85
HMRA2	YCR096C	YIL108W	P40483	696 aa	Known RBP	3.47	□□□□□ -1.85
HMRA2	YCR096C	YKE2	P52553	114 aa		3.47	□□□□□ -1.85
HMRA2	YCR096C	SCS3	P53012	380 aa		3.47	□□□□□ -1.85
HMRA2	YCR096C	CRR1	Q05790	422 aa		3.47	□□□□□ -1.85
HMRA2	YCR096C	DUS3	Q06053	668 aa	Known RBP	3.47	□□□□□ -1.85
HMRA2	YCR096C	NPP1	P25353	742 aa		3.46	□□□□□ -1.86
HMRA2	YCR096C	YBR238C	P38330	731 aa	Known RBP	3.46	□□□□□ -1.86
HMRA2	YCR096C	RIA1	P53893	1110 aa		3.46	□□□□□ -1.86
HMRA2	YCR096C	ABD1	P32783	436 aa	Predicted RBP	3.45	□□□□□ -1.86
HMRA2	YCR096C	SNF7	P39929	240 aa	Known RBP	3.45	□□□□□ -1.86
HMRA2	YCR096C	RRP15	Q06511	250 aa	Predicted RBP	3.44	□□□□□ -1.86
HMRA2	YCR096C	AFR1	P33304	620 aa		3.43	□□□□□ -1.86
HMRA2	YCR096C	PET112	P33893	541 aa		3.43	□□□□□ -1.86
HMRA2	YCR096C	GAT1	P43574	510 aa		3.43	□□□□□ -1.86
HMRA2	YCR096C	RMD1	Q03441	430 aa		3.43	□□□□□ -1.86
HMRA2	YCR096C	MRI1	Q06489	411 aa	Known RBP	3.43	□□□□□ -1.86
HMRA2	YCR096C	IRC13	Q08630	104 aa		3.43	□□□□□ -1.86
HMRA2	YCR096C	EMP70	P32802	667 aa		3.42	□□□□□ -1.86
HMRA2	YCR096C	GGA2	P38817	585 aa	Known RBP	3.42	□□□□□ -1.86
HMRA2	YCR096C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	3.42	□□□□□ -1.86	not detected
HMRA2	YCR096C	AMA1	P50082	593 aa		3.42	□□□□□ -1.86
HMRA2	YCR096C	PUS2	P53167	370 aa		3.42	□□□□□ -1.86
HMRA2	YCR096C	VPS30	Q02948	557 aa		3.42	□□□□□ -1.86
HMRA2	YCR096C	SLD2	P34252	453 aa		3.41	□□□□□ -1.86
HMRA2	YCR096C	CBR1	P38626	284 aa	Known RBP	3.41	□□□□□ -1.86
HMRA2	YCR096C	VHR1	P40522	640 aa		3.41	□□□□□ -1.86
HMRA2	YCR096C	APM1	Q00776	475 aa	Predicted RBP	3.41	□□□□□ -1.86
HMRA2	YCR096C	SPO11	P23179	398 aa		3.4	□□□□□ -1.87
HMRA2	YCR096C	DMC1	P25453	334 aa		3.4	□□□□□ -1.87
HMRA2	YCR096C	YUR1	P26725	428 aa		3.4	□□□□□ -1.87
HMRA2	YCR096C	TYE7	P33122	291 aa	Predicted RBP	3.4	□□□□□ -1.87
HMRA2	YCR096C	YHR078W	P38799	552 aa		3.4	□□□□□ -1.87
HMRA2	YCR096C	HDA1	P53973	706 aa		3.4	□□□□□ -1.87
HMRA2	YCR096C	YKR011C	Q02209	353 aa		3.4	□□□□□ -1.87
HMRA2	YCR096C	SGO1	Q08490	590 aa		3.4	□□□□□ -1.87
HMRA2	YCR096C	ORC2	P32833	620 aa		3.39	□□□□□ -1.87
HMRA2	YCR096C	YJL206C	P39529	758 aa		3.39	□□□□□ -1.87
HMRA2	YCR096C	CCT7	P42943	550 aa	Known RBP	3.39	□□□□□ -1.87
HMRA2	YCR096C	DAM1	P53267	343 aa		3.39	□□□□□ -1.87
HMRA2	YCR096C	TAF3	Q12297	353 aa		3.39	□□□□□ -1.87
HMRA2	YCR096C	PPH3	P32345	308 aa		3.38	□□□□□ -1.87
HMRA2	YCR096C	CEP3	P40969	608 aa		3.38	□□□□□ -1.87
HMRA2	YCR096C	ASI2	P53895	289 aa		3.38	□□□□□ -1.87
HMRA2	YCR096C	SMX3	P54999	86 aa	Predicted RBP	3.38	□□□□□ -1.87
HMRA2	YCR096C	SSL2	Q00578	843 aa		3.38	□□□□□ -1.87
HMRA2	YCR096C	ASM4	Q05166	528 aa		3.38	□□□□□ -1.87
HMRA2	YCR096C	YDR306C	Q06640	478 aa		3.38	□□□□□ -1.87
HMRA2	YCR096C	HIS7	P33734	552 aa	Known RBP	3.37	□□□□□ -1.87
HMRA2	YCR096C	ERT1	P38140	529 aa		3.37	□□□□□ -1.87
HMRA2	YCR096C	YIR042C	P40586	236 aa		3.37	□□□□□ -1.87
HMRA2	YCR096C	FAA4	P47912	694 aa	Known RBP	3.37	□□□□□ -1.87
HMRA2	YCR096C	RIM13	Q03792	727 aa		3.37	□□□□□ -1.87
HMRA2	YCR096C	RFA1	P22336	621 aa	Known RBP	3.36	□□□□□ -1.87
HMRA2	YCR096C	SBA1	P28707	216 aa	Known RBP	3.36	□□□□□ -1.87
HMRA2	YCR096C	BCD1	P38772	366 aa		3.36	□□□□□ -1.87
HMRA2	YCR096C	YEL020C	P39994	560 aa		3.36	□□□□□ -1.87
HMRA2	YCR096C	FMP52	P40008	231 aa		3.36	□□□□□ -1.87
HMRA2	YCR096C	TEL2	P53038	688 aa		3.36	□□□□□ -1.87
HMRA2	YCR096C	ADE8	P04161	214 aa		3.35	□□□□□ -1.87
HMRA2	YCR096C	MPH2	P0CD99	609 aa		3.35	□□□□□ -1.87
HMRA2	YCR096C	AGP1	P25376	633 aa		3.35	□□□□□ -1.87
HMRA2	YCR096C	YRO2	P38079	344 aa		3.35	□□□□□ -1.87
HMRA2	YCR096C	HOS4	P40480	1083 aa		3.35	□□□□□ -1.87
HMRA2	YCR096C	PKH1	Q03407	766 aa		3.35	□□□□□ -1.87
HMRA2	YCR096C	HOM2	P13663	365 aa	Known RBP	3.34	□□□□□ -1.87
HMRA2	YCR096C	MNR2	P35724	969 aa		3.34	□□□□□ -1.87
HMRA2	YCR096C	HSV2	P50079	448 aa	Predicted RBP	3.34	□□□□□ -1.87
HMRA2	YCR096C	NRG1	Q03125	231 aa		3.34	□□□□□ -1.87
HMRA2	YCR096C	MUS81	Q04149	632 aa	Predicted RBP	3.34	□□□□□ -1.87
HMRA2	YCR096C	LAT1	P12695	482 aa	Known RBP	3.33	□□□□□ -1.88
HMRA2	YCR096C	URA1	P28272	314 aa	Predicted RBP	3.33	□□□□□ -1.88
HMRA2	YCR096C	VBA5	P36172	582 aa		3.33	□□□□□ -1.88
HMRA2	YCR096C	UBS1	P38290	277 aa		3.33	□□□□□ -1.88
HMRA2	YCR096C	BNA3	P47039	444 aa	Known RBP	3.33	□□□□□ -1.88
HMRA2	YCR096C	BPL1	P48445	690 aa	Predicted RBP	3.33	□□□□□ -1.88
HMRA2	YCR096C	VPS16	Q03308	798 aa		3.33	□□□□□ -1.88
HMRA2	YCR096C	OYE2	Q03558	400 aa	Known RBP	3.33	□□□□□ -1.88
HMRA2	YCR096C	SEG1	Q04279	960 aa		3.33	□□□□□ -1.88
HMRA2	YCR096C	AAR2	P32357	355 aa	Predicted RBP	3.32	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 84 ms