RNA–Protein interactions for RNA: YBR283C

SSH1, Transcript of Subunit of the Ssh1 translocon complex, yeast

Gene SSH1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSH1	YBR283C	HEM3	P28789	327 aa		4.49	□□□□□ -1.69
SSH1	YBR283C	PRO3	P32263	286 aa	Known RBP	4.49	□□□□□ -1.69
SSH1	YBR283C	GCG1	P32656	232 aa	Known RBP	4.49	□□□□□ -1.69
SSH1	YBR283C	IXR1	P33417	597 aa		4.49	□□□□□ -1.69
SSH1	YBR283C	MYO3	P36006	1272 aa		4.49	□□□□□ -1.69
SSH1	YBR283C	MAL31	P38156	614 aa		4.49	□□□□□ -1.69
SSH1	YBR283C	RTS1	P38903	757 aa		4.49	□□□□□ -1.69
SSH1	YBR283C	TRS85	P46944	698 aa		4.49	□□□□□ -1.69
SSH1	YBR283C	LSC2	P53312	427 aa		4.49	□□□□□ -1.69
SSH1	YBR283C	NCS2	P53923	493 aa	Predicted RBP	4.49	□□□□□ -1.69
SSH1	YBR283C	UFD2	P54860	961 aa		4.49	□□□□□ -1.69
SSH1	YBR283C	RPS15	Q01855	142 aa	Known RBP	4.49	□□□□□ -1.69
SSH1	YBR283C	SYH1	Q02875	849 aa	Known RBP	4.49	□□□□□ -1.69
SSH1	YBR283C	UME1	Q03010	460 aa		4.49	□□□□□ -1.69
SSH1	YBR283C	VTI1	Q04338	217 aa		4.49	□□□□□ -1.69
SSH1	YBR283C	EIS1	Q05050	843 aa	Known RBP	4.49	□□□□□ -1.69
SSH1	YBR283C	YLR287C	Q05881	355 aa		4.49	□□□□□ -1.69
SSH1	YBR283C	SPP382	Q06411	708 aa	Predicted RBP	4.49	□□□□□ -1.69
SSH1	YBR283C	YOR296W	Q08748	1289 aa		4.49	□□□□□ -1.69
SSH1	YBR283C	MYO1	P08964	1928 aa		4.49	□□□□□ -1.69
SSH1	YBR283C	FBP1	P09201	348 aa		4.49	□□□□□ -1.69
SSH1	YBR283C	HVG1	P0CE11	249 aa		4.49	□□□□□ -1.69
SSH1	YBR283C	PMR1	P13586	950 aa		4.49	□□□□□ -1.69
SSH1	YBR283C	SAM2	P19358	384 aa	Known RBP	4.49	□□□□□ -1.69
SSH1	YBR283C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.49	□□□□□ -1.69	not detected
SSH1	YBR283C	RNR3	P21672	869 aa	Known RBP	4.49	□□□□□ -1.69
SSH1	YBR283C	PRE8	P23639	250 aa		4.49	□□□□□ -1.69
SSH1	YBR283C	CDC10	P25342	322 aa	Known RBP	4.49	□□□□□ -1.69
SSH1	YBR283C	SEC20	P28791	383 aa		4.49	□□□□□ -1.69
SSH1	YBR283C	CHS3	P29465	1165 aa		4.49	□□□□□ -1.69
SSH1	YBR283C	ISW1	P38144	1129 aa		4.49	□□□□□ -1.69
SSH1	YBR283C	CST26	P38226	397 aa		4.49	□□□□□ -1.69
SSH1	YBR283C	MRX1	P40050	688 aa		4.49	□□□□□ -1.69
SSH1	YBR283C	MAD1	P40957	749 aa		4.49	□□□□□ -1.69
SSH1	YBR283C	THI6	P41835	540 aa		4.49	□□□□□ -1.69
SSH1	YBR283C	RPS0B	P46654	252 aa	Known RBP	4.49	□□□□□ -1.69
SSH1	YBR283C	ACS2	P52910	683 aa	Known RBP	4.49	□□□□□ -1.69
SSH1	YBR283C	RRT6	P53117	311 aa	Predicted RBP	4.49	□□□□□ -1.69
SSH1	YBR283C	YGL138C	P53122	345 aa		4.49	□□□□□ -1.69
SSH1	YBR283C	DUS1	P53759	423 aa	Known RBP	4.49	□□□□□ -1.69
SSH1	YBR283C	SOV1	Q04748	898 aa		4.49	□□□□□ -1.69
SSH1	YBR283C	DAS2	Q12084	232 aa		4.49	□□□□□ -1.69
SSH1	YBR283C	NBL1	Q3E7Y6	73 aa		4.49	□□□□□ -1.69
SSH1	YBR283C	RAD61	Q99359	647 aa		4.49	□□□□□ -1.69
SSH1	YBR283C	FOB1	O13329	566 aa		4.48	□□□□□ -1.69
SSH1	YBR283C	TOM70	P07213	617 aa	Known RBP	4.48	□□□□□ -1.69
SSH1	YBR283C	SRM1	P21827	482 aa		4.48	□□□□□ -1.69
SSH1	YBR283C	MAK31	P23059	88 aa		4.48	□□□□□ -1.69
SSH1	YBR283C	VAN1	P23642	535 aa		4.48	□□□□□ -1.69
SSH1	YBR283C	RIT1	P23796	513 aa		4.48	□□□□□ -1.69
SSH1	YBR283C	PDC6	P26263	563 aa	Known RBP	4.48	□□□□□ -1.69
SSH1	YBR283C	PSO2	P30620	661 aa		4.48	□□□□□ -1.69
SSH1	YBR283C	PDB1	P32473	366 aa	Known RBP	4.48	□□□□□ -1.69
SSH1	YBR283C	ANP1	P32629	500 aa		4.48	□□□□□ -1.69
SSH1	YBR283C	LAS1	P36146	502 aa	Predicted RBP	4.48	□□□□□ -1.69
SSH1	YBR283C	BTN2	P53286	410 aa		4.48	□□□□□ -1.69
SSH1	YBR283C	RTC4	P53850	401 aa		4.48	□□□□□ -1.69
SSH1	YBR283C	MYO5	Q04439	1219 aa	Known RBP	4.48	□□□□□ -1.69
SSH1	YBR283C	ISR1	Q06098	443 aa	Known RBP	4.48	□□□□□ -1.69
SSH1	YBR283C	SDH5	Q08230	162 aa		4.48	□□□□□ -1.69
SSH1	YBR283C	PLP2	Q12017	286 aa		4.48	□□□□□ -1.69
SSH1	YBR283C	TIP41	Q12199	356 aa		4.48	□□□□□ -1.69
SSH1	YBR283C	PUS1	Q12211	544 aa	Known RBP	4.48	□□□□□ -1.69
SSH1	YBR283C	RAD3	P06839	778 aa		4.47	□□□□□ -1.69
SSH1	YBR283C	PYC1	P11154	1178 aa	Known RBP	4.47	□□□□□ -1.69
SSH1	YBR283C	SEC8	P32855	1065 aa		4.47	□□□□□ -1.69
SSH1	YBR283C	ASH1	P34233	588 aa		4.47	□□□□□ -1.69
SSH1	YBR283C	BSD2	P38356	321 aa		4.47	□□□□□ -1.69
SSH1	YBR283C	ERG7	P38604	731 aa		4.47	□□□□□ -1.69
SSH1	YBR283C	CSM2	P40465	213 aa		4.47	□□□□□ -1.69
SSH1	YBR283C	VTC2	P43585	828 aa		4.47	□□□□□ -1.69
SSH1	YBR283C	ROM1	P53046	1155 aa		4.47	□□□□□ -1.69
SSH1	YBR283C	RPT6	Q01939	405 aa	Known RBP	4.47	□□□□□ -1.69
SSH1	YBR283C	SUE1	Q06524	206 aa		4.47	□□□□□ -1.69
SSH1	YBR283C	YLR001C	Q07895	862 aa		4.47	□□□□□ -1.69
SSH1	YBR283C	PSR2	Q07949	397 aa		4.47	□□□□□ -1.69
SSH1	YBR283C	YAP7	Q08182	245 aa		4.47	□□□□□ -1.69
SSH1	YBR283C	YOL075C	Q08234	1294 aa		4.47	□□□□□ -1.69
SSH1	YBR283C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.47	□□□□□ -1.69	not detected
SSH1	YBR283C	CWC2	Q12046	339 aa	Predicted RBP	4.47	□□□□□ -1.69
SSH1	YBR283C	YOR111W	Q99210	232 aa		4.47	□□□□□ -1.69
SSH1	YBR283C	TUS1	Q06412	1307 aa		4.47	□□□□□ -1.69
SSH1	YBR283C	MET6	P05694	767 aa	Known RBP	4.46	□□□□□ -1.7
SSH1	YBR283C	GAL11	P19659	1081 aa		4.46	□□□□□ -1.7
SSH1	YBR283C	HEL1	P36113	551 aa		4.46	□□□□□ -1.7
SSH1	YBR283C	APE3	P37302	537 aa	Known RBP	4.46	□□□□□ -1.7
SSH1	YBR283C	TIF4631	P39935	952 aa	Known RBP	4.46	□□□□□ -1.7
SSH1	YBR283C	EMW1	P42842	904 aa	Known RBP	4.46	□□□□□ -1.7
SSH1	YBR283C	IES1	P43579	692 aa		4.46	□□□□□ -1.7
SSH1	YBR283C	ALG2	P43636	503 aa		4.46	□□□□□ -1.7
SSH1	YBR283C	YJR039W	P47107	1121 aa		4.46	□□□□□ -1.7
SSH1	YBR283C	CCM1	P48237	864 aa	Predicted RBP	4.46	□□□□□ -1.7
SSH1	YBR283C	YGR153W	P48238	217 aa		4.46	□□□□□ -1.7
SSH1	YBR283C	YML119W	Q03208	357 aa		4.46	□□□□□ -1.7
SSH1	YBR283C	MLH2	Q07980	695 aa		4.46	□□□□□ -1.7
SSH1	YBR283C	SIL1	Q08199	421 aa		4.46	□□□□□ -1.7
SSH1	YBR283C	TIF6	Q12522	245 aa	Known RBP	4.46	□□□□□ -1.7
SSH1	YBR283C	FUR4	P05316	633 aa	Known RBP	4.45	□□□□□ -1.7
SSH1	YBR283C	MIP1	P15801	1254 aa		4.45	□□□□□ -1.7
SSH1	YBR283C	TUP1	P16649	713 aa		4.45	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 37.3 ms