RNA–Protein interactions for RNA: YBR265W

TSC10, Transcript of 3-ketosphinganine reductase, yeast

Gene TSC10, Length 963 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSC10	YBR265W	GLN3	P18494	730 aa		10.57	□□□□□ -0.72
TSC10	YBR265W	UBX7	P38349	436 aa		10.57	□□□□□ -0.72
TSC10	YBR265W	BUD16	P39988	312 aa		10.57	□□□□□ -0.72
TSC10	YBR265W	MED1	Q12321	566 aa		10.57	□□□□□ -0.72
TSC10	YBR265W	DAL7	P21826	554 aa		10.56	□□□□□ -0.72
TSC10	YBR265W	YKL091C	P33324	310 aa	Known RBP	10.56	□□□□□ -0.72
TSC10	YBR265W	APN2	P38207	520 aa		10.56	□□□□□ -0.72
TSC10	YBR265W	MMS4	P38257	691 aa		10.56	□□□□□ -0.72
TSC10	YBR265W	SLX1	P38324	304 aa		10.56	□□□□□ -0.72
TSC10	YBR265W	BIM1	P40013	344 aa		10.56	□□□□□ -0.72
TSC10	YBR265W	HUL4	P40985	892 aa		10.56	□□□□□ -0.72
TSC10	YBR265W	TRS130	Q03660	1102 aa		10.56	□□□□□ -0.72
TSC10	YBR265W	YLR455W	Q06188	304 aa		10.56	□□□□□ -0.72
TSC10	YBR265W	TCO89	Q08921	799 aa		10.56	□□□□□ -0.72
TSC10	YBR265W	ADE4	P04046	510 aa	Known RBP	10.55	□□□□□ -0.72
TSC10	YBR265W	IDI1	P15496	288 aa		10.55	□□□□□ -0.72
TSC10	YBR265W	YEL1	P34225	687 aa		10.55	□□□□□ -0.72
TSC10	YBR265W	MRPL7	P36519	292 aa		10.55	□□□□□ -0.72
TSC10	YBR265W	OPT1	P40897	799 aa		10.55	□□□□□ -0.72
TSC10	YBR265W	ORC5	P50874	479 aa		10.55	□□□□□ -0.72
TSC10	YBR265W	MET13	P53128	600 aa		10.55	□□□□□ -0.72
TSC10	YBR265W	ENV11	P53246	860 aa		10.55	□□□□□ -0.72
TSC10	YBR265W	HEH2	Q03281	663 aa		10.55	□□□□□ -0.72
TSC10	YBR265W	CWC21	Q03375	135 aa	Known RBP	10.55	□□□□□ -0.72
TSC10	YBR265W	EMI2	Q04409	500 aa	Known RBP	10.55	□□□□□ -0.72
TSC10	YBR265W	SHS1	Q07657	551 aa		10.55	□□□□□ -0.72
TSC10	YBR265W	YPR117W	Q06116	2489 aa		10.55	□□□□□ -0.72
TSC10	YBR265W	TAF13	P11747	167 aa		10.54	□□□□□ -0.72
TSC10	YBR265W	VMA1	P17255	1071 aa	Known RBP	10.54	□□□□□ -0.72
TSC10	YBR265W	MSP1	P28737	362 aa		10.54	□□□□□ -0.72
TSC10	YBR265W	RPT1	P33299	467 aa	Known RBP	10.54	□□□□□ -0.72
TSC10	YBR265W	CSE2	P33308	149 aa		10.54	□□□□□ -0.72
TSC10	YBR265W	RRM3	P38766	723 aa		10.54	□□□□□ -0.72
TSC10	YBR265W	RVS167	P39743	482 aa	Known RBP	10.54	□□□□□ -0.72
TSC10	YBR265W	TOS3	P43637	560 aa		10.54	□□□□□ -0.72
TSC10	YBR265W	ASN1	P49089	572 aa	Known RBP	10.54	□□□□□ -0.72
TSC10	YBR265W	UTP14	Q04500	899 aa	Known RBP	10.54	□□□□□ -0.72
TSC10	YBR265W	SPP382	Q06411	708 aa	Predicted RBP	10.54	□□□□□ -0.72
TSC10	YBR265W	YPL216W	Q08964	1102 aa		10.54	□□□□□ -0.72
TSC10	YBR265W	CDC53	Q12018	815 aa	Known RBP	10.54	□□□□□ -0.72
TSC10	YBR265W	ZPS1	Q12512	249 aa		10.54	□□□□□ -0.72
TSC10	YBR265W	TRS33	Q99394	268 aa		10.54	□□□□□ -0.72
TSC10	YBR265W	TOM70	P07213	617 aa	Known RBP	10.53	□□□□□ -0.72
TSC10	YBR265W	MAK16	P10962	306 aa	Predicted RBP	10.53	□□□□□ -0.72
TSC10	YBR265W	TRM2	P33753	639 aa		10.53	□□□□□ -0.72
TSC10	YBR265W	NPP2	P39997	493 aa		10.53	□□□□□ -0.72
TSC10	YBR265W	YGR130C	P53278	816 aa		10.53	□□□□□ -0.72
TSC10	YBR265W	ALG11	P53954	548 aa	Known RBP	10.53	□□□□□ -0.72
TSC10	YBR265W	SDH5	Q08230	162 aa		10.53	□□□□□ -0.72
TSC10	YBR265W	DNL4	Q08387	944 aa	Predicted RBP	10.53	□□□□□ -0.72
TSC10	YBR265W	YOR022C	Q12204	715 aa		10.53	□□□□□ -0.72
TSC10	YBR265W	COX4	P04037	155 aa		10.52	□□□□□ -0.73
TSC10	YBR265W	POL3	P15436	1097 aa		10.52	□□□□□ -0.73
TSC10	YBR265W	RSA4	P25382	515 aa	Known RBP	10.52	□□□□□ -0.73
TSC10	YBR265W	TRK2	P28584	889 aa		10.52	□□□□□ -0.73
TSC10	YBR265W	MUD1	P32605	298 aa	Known RBP	10.52	□□□□□ -0.73
TSC10	YBR265W	BCD1	P38772	366 aa		10.52	□□□□□ -0.73
TSC10	YBR265W	TGL3	P40308	642 aa		10.52	□□□□□ -0.73
TSC10	YBR265W	HSH155	P49955	971 aa	Known RBP	10.52	□□□□□ -0.73
TSC10	YBR265W	EAF7	P53911	425 aa	Known RBP	10.52	□□□□□ -0.73
TSC10	YBR265W	DON1	Q05610	365 aa		10.52	□□□□□ -0.73
TSC10	YBR265W	HCR1	Q05775	265 aa	Known RBP	10.52	□□□□□ -0.73
TSC10	YBR265W	MLH2	Q07980	695 aa		10.52	□□□□□ -0.73
TSC10	YBR265W	AFT2	Q08957	416 aa		10.52	□□□□□ -0.73
TSC10	YBR265W	PUS1	Q12211	544 aa	Known RBP	10.52	□□□□□ -0.73
TSC10	YBR265W	OSH2	Q12451	1283 aa		10.52	□□□□□ -0.73
TSC10	YBR265W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	10.51	□□□□□ -0.73	not detected
TSC10	YBR265W	SSB1	P11484	613 aa	Known RBP	10.51	□□□□□ -0.73
TSC10	YBR265W	CHS2	P14180	963 aa		10.51	□□□□□ -0.73
TSC10	YBR265W	YHR202W	P38887	602 aa		10.51	□□□□□ -0.73
TSC10	YBR265W	FMP10	P40098	244 aa		10.51	□□□□□ -0.73
TSC10	YBR265W	SSB2	P40150	613 aa	Known RBP	10.51	□□□□□ -0.73
TSC10	YBR265W	GFD1	Q04839	188 aa	Known RBP	10.51	□□□□□ -0.73
TSC10	YBR265W	RLP24	Q07915	199 aa	Known RBP	10.51	□□□□□ -0.73
TSC10	YBR265W	PRC1	P00729	532 aa		10.5	□□□□□ -0.73
TSC10	YBR265W	ADK2	P26364	225 aa		10.5	□□□□□ -0.73
TSC10	YBR265W	PRR1	P28708	518 aa		10.5	□□□□□ -0.73
TSC10	YBR265W	PSO2	P30620	661 aa		10.5	□□□□□ -0.73
TSC10	YBR265W	RPN12	P32496	274 aa		10.5	□□□□□ -0.73
TSC10	YBR265W	IME2	P32581	645 aa		10.5	□□□□□ -0.73
TSC10	YBR265W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	10.5	□□□□□ -0.73	not detected
TSC10	YBR265W	HEL1	P36113	551 aa		10.5	□□□□□ -0.73
TSC10	YBR265W	NPR3	P38742	1146 aa		10.5	□□□□□ -0.73
TSC10	YBR265W	YER186C	P40101	306 aa		10.5	□□□□□ -0.73
TSC10	YBR265W	LSC2	P53312	427 aa		10.5	□□□□□ -0.73
TSC10	YBR265W	TIM8	P57744	87 aa		10.5	□□□□□ -0.73
TSC10	YBR265W	GIR2	Q03768	265 aa	Predicted RBP	10.5	□□□□□ -0.73
TSC10	YBR265W	SPO71	Q03868	1245 aa		10.5	□□□□□ -0.73
TSC10	YBR265W	ESC8	Q08119	714 aa		10.5	□□□□□ -0.73
TSC10	YBR265W	GSY2	P27472	705 aa		10.49	□□□□□ -0.73
TSC10	YBR265W	BIO2	P32451	375 aa		10.49	□□□□□ -0.73
TSC10	YBR265W	ADE17	P38009	592 aa	Known RBP	10.49	□□□□□ -0.73
TSC10	YBR265W	XDJ1	P39102	459 aa		10.49	□□□□□ -0.73
TSC10	YBR265W	MMF1	P40185	145 aa	Known RBP	10.49	□□□□□ -0.73
TSC10	YBR265W	LCB2	P40970	561 aa		10.49	□□□□□ -0.73
TSC10	YBR265W	YGR237C	P50089	785 aa		10.49	□□□□□ -0.73
TSC10	YBR265W	COG4	Q06096	861 aa		10.49	□□□□□ -0.73
TSC10	YBR265W	SGT2	Q12118	346 aa	Known RBP	10.49	□□□□□ -0.73
TSC10	YBR265W	CDC37	P06101	506 aa	Known RBP	10.48	□□□□□ -0.73
TSC10	YBR265W	RPL4A	P10664	362 aa	Known RBP	10.48	□□□□□ -0.73

Retrieved 100 of 5,963 RNA–protein pairs in 35 ms