RNA–Protein interactions for RNA: YBR222C

PCS60, Transcript of Oxalyl-CoA synthetase, yeast

Gene PCS60, Length 1,632 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCS60	YBR222C	YKL023W	P36103	277 aa	Known RBP	6.25	□□□□□ -1.41
PCS60	YBR222C	STV1	P37296	890 aa		6.25	□□□□□ -1.41
PCS60	YBR222C	OLA1	P38219	394 aa	Known RBP	6.25	□□□□□ -1.41
PCS60	YBR222C	FTH1	P38310	465 aa		6.25	□□□□□ -1.41
PCS60	YBR222C	SAP30	P38429	201 aa		6.25	□□□□□ -1.41
PCS60	YBR222C	BCD1	P38772	366 aa		6.25	□□□□□ -1.41
PCS60	YBR222C	PKP1	P40530	394 aa		6.25	□□□□□ -1.41
PCS60	YBR222C	SNZ3	P43545	298 aa		6.25	□□□□□ -1.41
PCS60	YBR222C	SNZ2	P53824	298 aa		6.25	□□□□□ -1.41
PCS60	YBR222C	YNL193W	P53870	558 aa		6.25	□□□□□ -1.41
PCS60	YBR222C	FOX2	Q02207	900 aa	Known RBP	6.25	□□□□□ -1.41
PCS60	YBR222C	RPM2	Q02773	1202 aa		6.25	□□□□□ -1.41
PCS60	YBR222C	MUB1	Q03162	620 aa		6.25	□□□□□ -1.41
PCS60	YBR222C	SDH5	Q08230	162 aa		6.25	□□□□□ -1.41
PCS60	YBR222C	YDR056C	Q12025	205 aa		6.25	□□□□□ -1.41
PCS60	YBR222C	JIP3	O13555	125 aa		6.24	□□□□□ -1.41
PCS60	YBR222C	TRL1	P09880	827 aa	Known RBP	6.24	□□□□□ -1.41
PCS60	YBR222C	PEP7	P32609	515 aa		6.24	□□□□□ -1.41
PCS60	YBR222C	RRP1	P35178	278 aa	Predicted RBP	6.24	□□□□□ -1.41
PCS60	YBR222C	GRS1	P38088	690 aa	Known RBP	6.24	□□□□□ -1.41
PCS60	YBR222C	VPS45	P38932	577 aa		6.24	□□□□□ -1.41
PCS60	YBR222C	YGR266W	P53326	701 aa		6.24	□□□□□ -1.41
PCS60	YBR222C	ERV25	P54837	211 aa	Known RBP	6.24	□□□□□ -1.41
PCS60	YBR222C	TGL2	P54857	326 aa		6.24	□□□□□ -1.41
PCS60	YBR222C	YDR131C	Q03899	556 aa		6.24	□□□□□ -1.41
PCS60	YBR222C	CUE5	Q08412	411 aa	Known RBP	6.24	□□□□□ -1.41
PCS60	YBR222C	TYW1	Q08960	810 aa	Known RBP	6.24	□□□□□ -1.41
PCS60	YBR222C	APL4	Q12028	832 aa		6.24	□□□□□ -1.41
PCS60	YBR222C	SCM3	Q12334	223 aa		6.24	□□□□□ -1.41
PCS60	YBR222C	IRC20	Q06554	1556 aa		6.24	□□□□□ -1.41
PCS60	YBR222C	HAP4	P14064	554 aa		6.23	□□□□□ -1.41
PCS60	YBR222C	OM45	P16547	393 aa		6.23	□□□□□ -1.41
PCS60	YBR222C	PRP6	P19735	899 aa	Predicted RBP	6.23	□□□□□ -1.41
PCS60	YBR222C	CLN2	P20438	545 aa		6.23	□□□□□ -1.41
PCS60	YBR222C	PRP28	P23394	588 aa		6.23	□□□□□ -1.41
PCS60	YBR222C	RPN2	P32565	945 aa	Known RBP	6.23	□□□□□ -1.41
PCS60	YBR222C	UBP11	P36026	717 aa		6.23	□□□□□ -1.41
PCS60	YBR222C	YRO2	P38079	344 aa		6.23	□□□□□ -1.41
PCS60	YBR222C	CCZ1	P38273	704 aa		6.23	□□□□□ -1.41
PCS60	YBR222C	FYV10	P40492	516 aa		6.23	□□□□□ -1.41
PCS60	YBR222C	SBE2	P42223	864 aa	Known RBP	6.23	□□□□□ -1.41
PCS60	YBR222C	RNR4	P49723	345 aa	Known RBP	6.23	□□□□□ -1.41
PCS60	YBR222C	PIP2	P52960	996 aa		6.23	□□□□□ -1.41
PCS60	YBR222C	PKH3	Q03306	898 aa	Predicted RBP	6.23	□□□□□ -1.41
PCS60	YBR222C	PRP42	Q03776	544 aa	Known RBP	6.23	□□□□□ -1.41
PCS60	YBR222C	YDL129W	Q07555	291 aa		6.23	□□□□□ -1.41
PCS60	YBR222C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	6.23	□□□□□ -1.41	not detected
PCS60	YBR222C	SSP2	Q08646	371 aa		6.23	□□□□□ -1.41
PCS60	YBR222C	STH1	P32597	1359 aa		6.23	□□□□□ -1.41
PCS60	YBR222C	TY1B-BR	Q12193	1756 aa		6.23	□□□□□ -1.41
PCS60	YBR222C	TY1B-GR3	Q12316	1755 aa		6.23	□□□□□ -1.41
PCS60	YBR222C	TY1B-OR	Q92393	1755 aa		6.23	□□□□□ -1.41
PCS60	YBR222C	ARG81	P05085	880 aa		6.22	□□□□□ -1.41
PCS60	YBR222C	FUR1	P18562	216 aa	Known RBP	6.22	□□□□□ -1.41
PCS60	YBR222C	HSP60	P19882	572 aa	Known RBP	6.22	□□□□□ -1.41
PCS60	YBR222C	DMC1	P25453	334 aa		6.22	□□□□□ -1.41
PCS60	YBR222C	THI4	P32318	326 aa		6.22	□□□□□ -1.41
PCS60	YBR222C	SSE1	P32589	693 aa	Known RBP	6.22	□□□□□ -1.41
PCS60	YBR222C	ORC2	P32833	620 aa		6.22	□□□□□ -1.41
PCS60	YBR222C	SSO1	P32867	290 aa		6.22	□□□□□ -1.41
PCS60	YBR222C	VPS17	P32913	551 aa		6.22	□□□□□ -1.41
PCS60	YBR222C	STE13	P33894	931 aa		6.22	□□□□□ -1.41
PCS60	YBR222C	ALG14	P38242	237 aa		6.22	□□□□□ -1.41
PCS60	YBR222C	MDJ2	P42834	146 aa		6.22	□□□□□ -1.41
PCS60	YBR222C	CCT8	P47079	568 aa	Known RBP	6.22	□□□□□ -1.41
PCS60	YBR222C	CSN12	P47130	423 aa		6.22	□□□□□ -1.41
PCS60	YBR222C	LYS4	P49367	693 aa	Predicted RBP	6.22	□□□□□ -1.41
PCS60	YBR222C	FMP30	Q02883	468 aa		6.22	□□□□□ -1.41
PCS60	YBR222C	PML39	Q03760	334 aa		6.22	□□□□□ -1.41
PCS60	YBR222C	TRM8	Q12009	286 aa		6.22	□□□□□ -1.41
PCS60	YBR222C	BUG1	Q12191	341 aa		6.22	□□□□□ -1.41
PCS60	YBR222C	CDC16	P09798	840 aa		6.21	□□□□□ -1.41
PCS60	YBR222C	BMH1	P29311	267 aa	Known RBP	6.21	□□□□□ -1.41
PCS60	YBR222C	RDH54	P38086	958 aa		6.21	□□□□□ -1.41
PCS60	YBR222C	RFC1	P38630	861 aa	Known RBP	6.21	□□□□□ -1.41
PCS60	YBR222C	OSH3	P38713	996 aa	Known RBP	6.21	□□□□□ -1.41
PCS60	YBR222C	NCS6	P53088	359 aa		6.21	□□□□□ -1.41
PCS60	YBR222C	ARO80	Q04052	950 aa		6.21	□□□□□ -1.41
PCS60	YBR222C	AHC1	Q12433	566 aa		6.21	□□□□□ -1.41
PCS60	YBR222C	TY2B-LR1	P0C2J3	1770 aa		6.21	□□□□□ -1.42
PCS60	YBR222C	TY2B-F	P0CX63	1770 aa		6.21	□□□□□ -1.42
PCS60	YBR222C	TY2B-GR2	P0CX64	1770 aa		6.21	□□□□□ -1.42
PCS60	YBR222C	TY2B-C	P25384	1770 aa		6.21	□□□□□ -1.42
PCS60	YBR222C	TY2B-DR2	Q03494	1770 aa		6.21	□□□□□ -1.42
PCS60	YBR222C	TY1B-DR1	Q03855	1755 aa		6.21	□□□□□ -1.42
PCS60	YBR222C	TY2B-DR3	Q07791	1770 aa	Known RBP	6.21	□□□□□ -1.42
PCS60	YBR222C	TY2B-OR1	Q12113	1770 aa		6.21	□□□□□ -1.42
PCS60	YBR222C	TY2B-DR1	Q12472	1770 aa		6.21	□□□□□ -1.42
PCS60	YBR222C	TY2B-OR2	Q12501	1770 aa		6.21	□□□□□ -1.42
PCS60	YBR222C	CET1	O13297	549 aa	Predicted RBP	6.21	□□□□□ -1.42
PCS60	YBR222C	HCA4	P20448	770 aa	Known RBP	6.21	□□□□□ -1.42
PCS60	YBR222C	DOA4	P32571	926 aa		6.21	□□□□□ -1.42
PCS60	YBR222C	UBC6	P33296	250 aa	Predicted RBP	6.21	□□□□□ -1.42
PCS60	YBR222C	YKL133C	P36066	463 aa		6.21	□□□□□ -1.42
PCS60	YBR222C	YBL036C	P38197	257 aa		6.21	□□□□□ -1.42
PCS60	YBR222C	MSG5	P38590	489 aa		6.21	□□□□□ -1.42
PCS60	YBR222C	RRM3	P38766	723 aa		6.21	□□□□□ -1.42
PCS60	YBR222C	RTC3	P38804	111 aa	Predicted RBP	6.21	□□□□□ -1.42
PCS60	YBR222C	YJR061W	P40355	935 aa		6.21	□□□□□ -1.42
PCS60	YBR222C	SPR3	P41901	512 aa		6.21	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 36 ms