RNA–Protein interactions for RNA: YBR216C

YBP1, Transcript of Protein involved in cellular response to oxidative stress, yeast

Gene YBP1, Length 2,025 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YBP1	YBR216C	ATF1	P40353	525 aa		3.24	□□□□□ -1.89
YBP1	YBR216C	SDP1	P40479	209 aa		3.24	□□□□□ -1.89
YBP1	YBR216C	YIL108W	P40483	696 aa	Known RBP	3.24	□□□□□ -1.89
YBP1	YBR216C	SWM1	Q12379	170 aa		3.24	□□□□□ -1.89
YBP1	YBR216C	MET3	P08536	511 aa		3.23	□□□□□ -1.89
YBP1	YBR216C	FBP1	P09201	348 aa		3.23	□□□□□ -1.89
YBP1	YBR216C	SIT1	P39980	628 aa		3.23	□□□□□ -1.89
YBP1	YBR216C	SVF1	Q05515	481 aa		3.23	□□□□□ -1.89
YBP1	YBR216C	MTH1	P35198	433 aa		3.22	□□□□□ -1.89
YBP1	YBR216C	CTF13	P35203	478 aa		3.22	□□□□□ -1.89
YBP1	YBR216C	CCM1	P48237	864 aa	Predicted RBP	3.22	□□□□□ -1.89
YBP1	YBR216C	GND2	P53319	492 aa		3.22	□□□□□ -1.89
YBP1	YBR216C	FRE5	Q08908	694 aa		3.22	□□□□□ -1.89
YBP1	YBR216C	TRM11	Q12463	433 aa		3.22	□□□□□ -1.89
YBP1	YBR216C	TYE7	P33122	291 aa	Predicted RBP	3.22	□□□□□ -1.89
YBP1	YBR216C	SPC42	P36094	363 aa		3.22	□□□□□ -1.89
YBP1	YBR216C	ERT1	P38140	529 aa		3.22	□□□□□ -1.89
YBP1	YBR216C	CTF8	P38877	133 aa		3.22	□□□□□ -1.89
YBP1	YBR216C	DLT1	Q04216	342 aa		3.22	□□□□□ -1.89
YBP1	YBR216C	HBT1	Q07653	1046 aa	Known RBP	3.22	□□□□□ -1.89
YBP1	YBR216C	TUB3	P09734	445 aa	Known RBP	3.21	□□□□□ -1.9
YBP1	YBR216C	ELO3	P40319	345 aa		3.21	□□□□□ -1.9
YBP1	YBR216C	IRR1	P40541	1150 aa		3.21	□□□□□ -1.9
YBP1	YBR216C	CEP3	P40969	608 aa		3.21	□□□□□ -1.9
YBP1	YBR216C	YKR011C	Q02209	353 aa		3.21	□□□□□ -1.9
YBP1	YBR216C	LGE1	Q02796	332 aa	Known RBP	3.21	□□□□□ -1.9
YBP1	YBR216C	PRP9	P19736	530 aa	Known RBP	3.2	□□□□□ -1.9
YBP1	YBR216C	URA1	P28272	314 aa	Predicted RBP	3.2	□□□□□ -1.9
YBP1	YBR216C	CUE2	P36075	443 aa	Known RBP	3.2	□□□□□ -1.9
YBP1	YBR216C	PPS1	P38148	807 aa		3.2	□□□□□ -1.9
YBP1	YBR216C	TOK1	P40310	691 aa		3.2	□□□□□ -1.9
YBP1	YBR216C	DAS1	P47005	663 aa		3.2	□□□□□ -1.9
YBP1	YBR216C	LCD1	Q04377	747 aa		3.2	□□□□□ -1.9
YBP1	YBR216C	BDF2	Q07442	638 aa		3.2	□□□□□ -1.9
YBP1	YBR216C	RPS9A	O13516	197 aa	Known RBP	3.2	□□□□□ -1.9
YBP1	YBR216C	HDA1	P53973	706 aa		3.2	□□□□□ -1.9
YBP1	YBR216C	BUL2	Q03758	920 aa	Known RBP	3.2	□□□□□ -1.9
YBP1	YBR216C	CAF20	P12962	161 aa	Known RBP	3.19	□□□□□ -1.9
YBP1	YBR216C	HBS1	P32769	611 aa	Known RBP	3.19	□□□□□ -1.9
YBP1	YBR216C	REC104	P33323	182 aa		3.19	□□□□□ -1.9
YBP1	YBR216C	YHL017W	P38745	532 aa		3.19	□□□□□ -1.9
YBP1	YBR216C	YHR078W	P38799	552 aa		3.19	□□□□□ -1.9
YBP1	YBR216C	VAC8	P39968	578 aa		3.19	□□□□□ -1.9
YBP1	YBR216C	SDS3	P40505	327 aa		3.19	□□□□□ -1.9
YBP1	YBR216C	FKH2	P41813	862 aa		3.19	□□□□□ -1.9
YBP1	YBR216C	PUS2	P53167	370 aa		3.19	□□□□□ -1.9
YBP1	YBR216C	TDA5	Q06417	326 aa	Known RBP	3.19	□□□□□ -1.9
YBP1	YBR216C	STE5	P32917	917 aa		3.19	□□□□□ -1.9
YBP1	YBR216C	RPP1	P38786	293 aa		3.19	□□□□□ -1.9
YBP1	YBR216C	SPF1	P39986	1215 aa	Known RBP	3.19	□□□□□ -1.9
YBP1	YBR216C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
YBP1	YBR216C	ADY4	Q05955	493 aa		3.19	□□□□□ -1.9
YBP1	YBR216C	SCT1	P32784	759 aa		3.18	□□□□□ -1.9
YBP1	YBR216C	MUP1	P50276	574 aa		3.18	□□□□□ -1.9
YBP1	YBR216C	ALD6	P54115	500 aa	Known RBP	3.18	□□□□□ -1.9
YBP1	YBR216C	CDC11	P32458	415 aa		3.17	□□□□□ -1.9
YBP1	YBR216C	YBR184W	P38299	523 aa		3.17	□□□□□ -1.9
YBP1	YBR216C	CRR1	Q05790	422 aa		3.17	□□□□□ -1.9
YBP1	YBR216C	YPR071W	Q12346	211 aa		3.17	□□□□□ -1.9
YBP1	YBR216C	YBR284W	P38150	797 aa		3.17	□□□□□ -1.9
YBP1	YBR216C	ALR2	P43553	858 aa		3.17	□□□□□ -1.9
YBP1	YBR216C	MRH1	Q12117	320 aa	Predicted RBP	3.17	□□□□□ -1.9
YBP1	YBR216C	MPH2	P0CD99	609 aa		3.16	□□□□□ -1.9
YBP1	YBR216C	PRP4	P20053	465 aa	Known RBP	3.16	□□□□□ -1.9
YBP1	YBR216C	VHR1	P40522	640 aa		3.16	□□□□□ -1.9
YBP1	YBR216C	PFD1	P46988	109 aa		3.16	□□□□□ -1.9
YBP1	YBR216C	MRPS35	P53292	345 aa		3.16	□□□□□ -1.9
YBP1	YBR216C	PKH1	Q03407	766 aa		3.16	□□□□□ -1.9
YBP1	YBR216C	DUS1	P53759	423 aa	Known RBP	3.15	□□□□□ -1.9
YBP1	YBR216C	ASI2	P53895	289 aa		3.15	□□□□□ -1.9
YBP1	YBR216C	FMP25	Q08023	583 aa		3.15	□□□□□ -1.9
YBP1	YBR216C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.9	not detected
YBP1	YBR216C	NGG1	P32494	702 aa		3.15	□□□□□ -1.91
YBP1	YBR216C	GFA1	P14742	717 aa	Known RBP	3.14	□□□□□ -1.91
YBP1	YBR216C	CYS3	P31373	394 aa	Known RBP	3.14	□□□□□ -1.91
YBP1	YBR216C	YBR053C	P38235	358 aa		3.14	□□□□□ -1.91
YBP1	YBR216C	PCL5	P38794	229 aa		3.14	□□□□□ -1.91
YBP1	YBR216C	PZF1	P39933	429 aa		3.14	□□□□□ -1.91
YBP1	YBR216C	YJL163C	P46996	555 aa		3.14	□□□□□ -1.91
YBP1	YBR216C	AMA1	P50082	593 aa		3.14	□□□□□ -1.91
YBP1	YBR216C	ENV7	Q12003	364 aa		3.14	□□□□□ -1.91
YBP1	YBR216C	NDJ1	Q12366	352 aa		3.14	□□□□□ -1.91
YBP1	YBR216C	MSD1	P15179	658 aa	Known RBP	3.14	□□□□□ -1.91
YBP1	YBR216C	PEX2	P32800	271 aa		3.14	□□□□□ -1.91
YBP1	YBR216C	PET10	P36139	283 aa		3.14	□□□□□ -1.91
YBP1	YBR216C	TDP1	P38319	544 aa		3.14	□□□□□ -1.91
YBP1	YBR216C	UTP8	P53276	713 aa	Known RBP	3.14	□□□□□ -1.91
YBP1	YBR216C	NOG2	P53742	486 aa	Known RBP	3.14	□□□□□ -1.91
YBP1	YBR216C	UBX5	Q06682	500 aa		3.14	□□□□□ -1.91
YBP1	YBR216C	HAL9	Q12180	1030 aa		3.14	□□□□□ -1.91
YBP1	YBR216C	CDC43	P18898	376 aa		3.13	□□□□□ -1.91
YBP1	YBR216C	NIT3	P49954	291 aa		3.13	□□□□□ -1.91
YBP1	YBR216C	RIA1	P53893	1110 aa		3.13	□□□□□ -1.91
YBP1	YBR216C	NRG1	Q03125	231 aa		3.13	□□□□□ -1.91
YBP1	YBR216C	YOR022C	Q12204	715 aa		3.13	□□□□□ -1.91
YBP1	YBR216C	PPZ2	P33329	710 aa		3.12	□□□□□ -1.91
YBP1	YBR216C	SAK1	P38990	1142 aa		3.12	□□□□□ -1.91
YBP1	YBR216C	YIR042C	P40586	236 aa		3.12	□□□□□ -1.91
YBP1	YBR216C	SNM1	P40993	198 aa		3.12	□□□□□ -1.91
YBP1	YBR216C	ERP6	P53198	216 aa		3.12	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 45.8 ms