RNA–Protein interactions for RNA: YBR061C

TRM7, Transcript of 2'-O-ribose methyltransferase, yeast

Gene TRM7, Length 933 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM7	YBR061C	GYP7	P48365	746 aa		3.13	□□□□□ -1.91
TRM7	YBR061C	YNL193W	P53870	558 aa		3.13	□□□□□ -1.91
TRM7	YBR061C	ENA2	Q01896	1091 aa		3.13	□□□□□ -1.91
TRM7	YBR061C	MSC2	Q03455	724 aa		3.13	□□□□□ -1.91
TRM7	YBR061C	SGD1	Q06132	899 aa		3.13	□□□□□ -1.91
TRM7	YBR061C	ENA5	Q12691	1091 aa		3.13	□□□□□ -1.91
TRM7	YBR061C	SGS1	P35187	1447 aa		3.12	□□□□□ -1.91
TRM7	YBR061C	TOP1	P04786	769 aa		3.12	□□□□□ -1.91
TRM7	YBR061C	CDC48	P25694	835 aa	Known RBP	3.12	□□□□□ -1.91
TRM7	YBR061C	SRP101	P32916	621 aa		3.12	□□□□□ -1.91
TRM7	YBR061C	AFR1	P33304	620 aa		3.12	□□□□□ -1.91
TRM7	YBR061C	REC104	P33323	182 aa		3.12	□□□□□ -1.91
TRM7	YBR061C	YEL1	P34225	687 aa		3.12	□□□□□ -1.91
TRM7	YBR061C	ECM21	P38167	1117 aa	Known RBP	3.12	□□□□□ -1.91
TRM7	YBR061C	LAM1	P38851	1228 aa		3.12	□□□□□ -1.91
TRM7	YBR061C	DSS1	P39112	969 aa		3.12	□□□□□ -1.91
TRM7	YBR061C	ZRG8	P40021	1076 aa		3.12	□□□□□ -1.91
TRM7	YBR061C	TOK1	P40310	691 aa		3.12	□□□□□ -1.91
TRM7	YBR061C	GTF1	P53260	183 aa	Predicted RBP	3.12	□□□□□ -1.91
TRM7	YBR061C	RTS3	P53289	263 aa		3.12	□□□□□ -1.91
TRM7	YBR061C	PLB2	Q03674	706 aa		3.12	□□□□□ -1.91
TRM7	YBR061C	BUL2	Q03758	920 aa	Known RBP	3.12	□□□□□ -1.91
TRM7	YBR061C	SIZ1	Q04195	904 aa		3.12	□□□□□ -1.91
TRM7	YBR061C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
TRM7	YBR061C	MEF1	P25039	761 aa		3.11	□□□□□ -1.91
TRM7	YBR061C	VBA3	P25594	458 aa		3.11	□□□□□ -1.91
TRM7	YBR061C	SPC29	P33419	253 aa		3.11	□□□□□ -1.91
TRM7	YBR061C	YBR238C	P38330	731 aa	Known RBP	3.11	□□□□□ -1.91
TRM7	YBR061C	YJR008W	P47085	338 aa		3.11	□□□□□ -1.91
TRM7	YBR061C	YGR237C	P50089	785 aa		3.11	□□□□□ -1.91
TRM7	YBR061C	RIM8	P53179	542 aa		3.11	□□□□□ -1.91
TRM7	YBR061C	DAM1	P53267	343 aa		3.11	□□□□□ -1.91
TRM7	YBR061C	COG8	Q04632	607 aa		3.11	□□□□□ -1.91
TRM7	YBR061C	THI73	Q07904	523 aa		3.11	□□□□□ -1.91
TRM7	YBR061C	HSF1	P10961	833 aa		3.1	□□□□□ -1.91
TRM7	YBR061C	RFA1	P22336	621 aa	Known RBP	3.1	□□□□□ -1.91
TRM7	YBR061C	RPC82	P32349	654 aa		3.1	□□□□□ -1.91
TRM7	YBR061C	EMC3	P36039	253 aa		3.1	□□□□□ -1.91
TRM7	YBR061C	MEF2	P39677	819 aa		3.1	□□□□□ -1.91
TRM7	YBR061C	MND2	P40577	368 aa		3.1	□□□□□ -1.91
TRM7	YBR061C	GCV2	P49095	1034 aa		3.1	□□□□□ -1.91
TRM7	YBR061C	NIT3	P49954	291 aa		3.1	□□□□□ -1.91
TRM7	YBR061C	SPT20	P50875	604 aa		3.1	□□□□□ -1.91
TRM7	YBR061C	YGR012W	P53206	393 aa		3.1	□□□□□ -1.91
TRM7	YBR061C	PBP1	P53297	722 aa	Known RBP	3.1	□□□□□ -1.91
TRM7	YBR061C	SDA1	P53313	767 aa	Known RBP	3.1	□□□□□ -1.91
TRM7	YBR061C	YGR283C	P53336	341 aa	Predicted RBP	3.1	□□□□□ -1.91
TRM7	YBR061C	UME1	Q03010	460 aa		3.1	□□□□□ -1.91
TRM7	YBR061C	ATP25	Q03153	612 aa		3.1	□□□□□ -1.91
TRM7	YBR061C	GSF2	Q04697	403 aa	Known RBP	3.1	□□□□□ -1.91
TRM7	YBR061C	CDA1	Q06702	301 aa		3.1	□□□□□ -1.91
TRM7	YBR061C	YLR001C	Q07895	862 aa		3.1	□□□□□ -1.91
TRM7	YBR061C	NUP145	P49687	1317 aa		3.1	□□□□□ -1.91
TRM7	YBR061C	CDC9	P04819	755 aa		3.09	□□□□□ -1.91
TRM7	YBR061C	RPS13	P05756	151 aa	Known RBP	3.09	□□□□□ -1.91
TRM7	YBR061C	NOT3	P06102	836 aa	Known RBP	3.09	□□□□□ -1.91
TRM7	YBR061C	SRD1	P09007	221 aa		3.09	□□□□□ -1.91
TRM7	YBR061C	STO1	P34160	861 aa	Known RBP	3.09	□□□□□ -1.91
TRM7	YBR061C	MTC2	P34246	357 aa		3.09	□□□□□ -1.91
TRM7	YBR061C	GRX7	P38068	203 aa		3.09	□□□□□ -1.91
TRM7	YBR061C	POA1	P38218	177 aa		3.09	□□□□□ -1.91
TRM7	YBR061C	MGS1	P40151	587 aa		3.09	□□□□□ -1.91
TRM7	YBR061C	CAF16	P43569	289 aa		3.09	□□□□□ -1.91
TRM7	YBR061C	ATG36	P46983	293 aa		3.09	□□□□□ -1.91
TRM7	YBR061C	PSP2	P50109	593 aa	Known RBP	3.09	□□□□□ -1.91
TRM7	YBR061C	YKE2	P52553	114 aa		3.09	□□□□□ -1.91
TRM7	YBR061C	GCN5	Q03330	439 aa		3.09	□□□□□ -1.91
TRM7	YBR061C	YDR514C	Q04408	483 aa		3.09	□□□□□ -1.91
TRM7	YBR061C	TPO1	Q07824	586 aa		3.09	□□□□□ -1.91
TRM7	YBR061C	GPB1	Q08886	897 aa		3.09	□□□□□ -1.91
TRM7	YBR061C	YPL277C	Q08989	487 aa		3.09	□□□□□ -1.91
TRM7	YBR061C	SPA2	P23201	1466 aa	Known RBP	3.09	□□□□□ -1.92
TRM7	YBR061C	EMC1	P25574	760 aa		3.08	□□□□□ -1.92
TRM7	YBR061C	PCL2	P25693	308 aa		3.08	□□□□□ -1.92
TRM7	YBR061C	TOD6	P34219	525 aa		3.08	□□□□□ -1.92
TRM7	YBR061C	GYP8	P43570	497 aa		3.08	□□□□□ -1.92
TRM7	YBR061C	RAI1	P53063	387 aa	Known RBP	3.08	□□□□□ -1.92
TRM7	YBR061C	VPS30	Q02948	557 aa		3.08	□□□□□ -1.92
TRM7	YBR061C	YDR132C	Q03900	495 aa		3.08	□□□□□ -1.92
TRM7	YBR061C	HFD1	Q04458	532 aa		3.08	□□□□□ -1.92
TRM7	YBR061C	RSC3	Q06639	885 aa		3.08	□□□□□ -1.92
TRM7	YBR061C	REH1	Q06709	432 aa		3.08	□□□□□ -1.92
TRM7	YBR061C	RXT3	Q07458	294 aa		3.08	□□□□□ -1.92
TRM7	YBR061C	MET7	Q08645	548 aa		3.08	□□□□□ -1.92
TRM7	YBR061C	ENV7	Q12003	364 aa		3.08	□□□□□ -1.92
TRM7	YBR061C	FAP7	Q12055	197 aa	Predicted RBP	3.08	□□□□□ -1.92
TRM7	YBR061C	RPS9A	O13516	197 aa	Known RBP	3.07	□□□□□ -1.92
TRM7	YBR061C	SOD2	P00447	233 aa		3.07	□□□□□ -1.92
TRM7	YBR061C	SPE1	P08432	466 aa		3.07	□□□□□ -1.92
TRM7	YBR061C	MPH2	P0CD99	609 aa		3.07	□□□□□ -1.92
TRM7	YBR061C	ENP1	P38333	483 aa	Known RBP	3.07	□□□□□ -1.92
TRM7	YBR061C	NUG1	P40010	520 aa	Known RBP	3.07	□□□□□ -1.92
TRM7	YBR061C	TPM2	P40414	161 aa		3.07	□□□□□ -1.92
TRM7	YBR061C	CEP3	P40969	608 aa		3.07	□□□□□ -1.92
TRM7	YBR061C	FOL1	P53848	824 aa		3.07	□□□□□ -1.92
TRM7	YBR061C	YAP6	Q03935	383 aa		3.07	□□□□□ -1.92
TRM7	YBR061C	DUS4	Q06063	367 aa		3.07	□□□□□ -1.92
TRM7	YBR061C	TMA17	Q12513	150 aa		3.07	□□□□□ -1.92
TRM7	YBR061C	RAD18	P10862	487 aa		3.06	□□□□□ -1.92
TRM7	YBR061C	SFL1	P20134	766 aa		3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms