RNA–Protein interactions for RNA: YAL047C

SPC72, Transcript of Component of the cytoplasmic Tub4p (gamma-tubulin) complex, yeastyeast

Gene SPC72, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC72YAL047C NCS6P53088 359 aa3.44□□□□□ -1.86
SPC72YAL047C PUS2P53167 370 aa3.44□□□□□ -1.86
SPC72YAL047C CIT1P00890 479 aa3.43□□□□□ -1.86
SPC72YAL047C MSD1P15179 658 aaKnown RBP3.43□□□□□ -1.86
SPC72YAL047C PET10P36139 283 aa3.43□□□□□ -1.86
SPC72YAL047C ENB1Q08299 606 aa3.43□□□□□ -1.86
SPC72YAL047C PUS9Q12069 462 aa3.43□□□□□ -1.86
SPC72YAL047C UPC2Q12151 913 aa3.43□□□□□ -1.86
SPC72YAL047C HBN1Q96VH4 193 aa3.43□□□□□ -1.86
SPC72YAL047C TOM70P07213 617 aaKnown RBP3.43□□□□□ -1.86
SPC72YAL047C MPH2P0CD99 609 aa3.43□□□□□ -1.86
SPC72YAL047C URA1P28272 314 aaPredicted RBP3.43□□□□□ -1.86
SPC72YAL047C RPD3P32561 433 aa3.43□□□□□ -1.86
SPC72YAL047C SSL1Q04673 461 aaPredicted RBP3.43□□□□□ -1.86
SPC72YAL047C KOG1P38873 1557 aa3.42□□□□□ -1.86
SPC72YAL047C KAR4P25583 335 aa3.42□□□□□ -1.86
SPC72YAL047C HRR25P29295 494 aaKnown RBP3.42□□□□□ -1.86
SPC72YAL047C DEF1P35732 738 aaKnown RBP3.42□□□□□ -1.86
SPC72YAL047C NPL3Q01560 414 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
SPC72YAL047C YKR011CQ02209 353 aa3.42□□□□□ -1.86
SPC72YAL047C BUL2Q03758 920 aaKnown RBP3.42□□□□□ -1.86
SPC72YAL047C GUP2Q08929 609 aa3.42□□□□□ -1.86
SPC72YAL047C CDC53Q12018 815 aaKnown RBP3.42□□□□□ -1.86
SPC72YAL047C MSS4P38994 779 aa3.41□□□□□ -1.86
SPC72YAL047C NNF1P47149 201 aa3.41□□□□□ -1.86
SPC72YAL047C SUN4P53616 420 aa3.41□□□□□ -1.86
SPC72YAL047C FLC1Q08967 793 aa3.41□□□□□ -1.86
SPC72YAL047C TOP3P13099 656 aa3.41□□□□□ -1.86
SPC72YAL047C GAL11P19659 1081 aa3.41□□□□□ -1.86
SPC72YAL047C HUL5P53119 910 aa3.41□□□□□ -1.86
SPC72YAL047C GGA2P38817 585 aaKnown RBP3.4□□□□□ -1.87
SPC72YAL047C SDP1P40479 209 aa3.4□□□□□ -1.87
SPC72YAL047C UBP6P43593 499 aaKnown RBP3.4□□□□□ -1.87
SPC72YAL047C NOG2P53742 486 aaKnown RBP3.4□□□□□ -1.87
SPC72YAL047C ENV7Q12003 364 aa3.4□□□□□ -1.87
SPC72YAL047C SWM1Q12379 170 aa3.4□□□□□ -1.87
SPC72YAL047C YOR131CQ12486 218 aa3.4□□□□□ -1.87
SPC72YAL047C SAP190P36123 1033 aa3.39□□□□□ -1.87
SPC72YAL047C KIN4Q01919 800 aa3.39□□□□□ -1.87
SPC72YAL047C TAF8Q03750 510 aa3.39□□□□□ -1.87
SPC72YAL047C PEX19Q07418 342 aa3.39□□□□□ -1.87
SPC72YAL047C STI1P15705 589 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
SPC72YAL047C CYS3P31373 394 aaKnown RBP3.39□□□□□ -1.87
SPC72YAL047C EFT1P32324 842 aaKnown RBP3.39□□□□□ -1.87
SPC72YAL047C STE14P32584 239 aa3.39□□□□□ -1.87
SPC72YAL047C HDA1P53973 706 aa3.39□□□□□ -1.87
SPC72YAL047C BDF2Q07442 638 aa3.39□□□□□ -1.87
SPC72YAL047C PRC1P00729 532 aa3.38□□□□□ -1.87
SPC72YAL047C DAL7P21826 554 aa3.38□□□□□ -1.87
SPC72YAL047C SUL1P38359 859 aa3.38□□□□□ -1.87
SPC72YAL047C YHR020WP38708 688 aaKnown RBP3.38□□□□□ -1.87
SPC72YAL047C YHR078WP38799 552 aa3.38□□□□□ -1.87
SPC72YAL047C CTF8P38877 133 aa3.38□□□□□ -1.87
SPC72YAL047C RSP5P39940 809 aaKnown RBP3.38□□□□□ -1.87
SPC72YAL047C DAM1P53267 343 aa3.38□□□□□ -1.87
SPC72YAL047C NSE3Q05541 303 aa3.38□□□□□ -1.87
SPC72YAL047C CAN1P04817 590 aa3.37□□□□□ -1.87
SPC72YAL047C SEC21P32074 935 aaKnown RBP3.37□□□□□ -1.87
SPC72YAL047C EMC3P36039 253 aa3.37□□□□□ -1.87
SPC72YAL047C ALG2P43636 503 aa3.37□□□□□ -1.87
SPC72YAL047C LAS17Q12446 633 aa3.37□□□□□ -1.87
SPC72YAL047C PHR1P05066 565 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
SPC72YAL047C FBP1P09201 348 aa3.37□□□□□ -1.87
SPC72YAL047C SRP40P32583 406 aaPredicted RBP3.37□□□□□ -1.87
SPC72YAL047C KTR4P38131 464 aa3.37□□□□□ -1.87
SPC72YAL047C TAD1P53065 400 aa3.37□□□□□ -1.87
SPC72YAL047C DUS1P53759 423 aaKnown RBP3.37□□□□□ -1.87
SPC72YAL047C CTF4Q01454 927 aa3.37□□□□□ -1.87
SPC72YAL047C YDR514CQ04408 483 aa3.37□□□□□ -1.87
SPC72YAL047C REH1Q06709 432 aa3.37□□□□□ -1.87
SPC72YAL047C YOR022CQ12204 715 aa3.37□□□□□ -1.87
SPC72YAL047C YOL098CQ12496 1037 aa3.37□□□□□ -1.87
SPC72YAL047C SWR1Q05471 1514 aa3.36□□□□□ -1.87
SPC72YAL047C TRP4P07285 380 aaPredicted RBP3.36□□□□□ -1.87
SPC72YAL047C MET3P08536 511 aa3.36□□□□□ -1.87
SPC72YAL047C NGG1P32494 702 aa3.36□□□□□ -1.87
SPC72YAL047C BET3P36149 193 aa3.36□□□□□ -1.87
SPC72YAL047C PKH1Q03407 766 aa3.36□□□□□ -1.87
SPC72YAL047C HAL9Q12180 1030 aa3.36□□□□□ -1.87
SPC72YAL047C TRM11Q12463 433 aa3.36□□□□□ -1.87
SPC72YAL047C ERG4P25340 473 aa3.35□□□□□ -1.87
SPC72YAL047C YKL091CP33324 310 aaKnown RBP3.35□□□□□ -1.87
SPC72YAL047C CHS7P38843 316 aa3.35□□□□□ -1.87
SPC72YAL047C PZF1P39933 429 aa3.35□□□□□ -1.87
SPC72YAL047C SHR5P41912 237 aa3.35□□□□□ -1.87
SPC72YAL047C GYP8P43570 497 aa3.35□□□□□ -1.87
SPC72YAL047C RTA1P53047 317 aa3.35□□□□□ -1.87
SPC72YAL047C YGR283CP53336 341 aaPredicted RBP3.35□□□□□ -1.87
SPC72YAL047C RNT1Q02555 471 aa3.35□□□□□ -1.87
SPC72YAL047C RSC3Q06639 885 aa3.35□□□□□ -1.87
SPC72YAL047C YLR040CQ07988 224 aa3.35□□□□□ -1.87
SPC72YAL047C SET5P38890 526 aaKnown RBP3.35□□□□□ -1.87
SPC72YAL047C VHR1P40522 640 aa3.35□□□□□ -1.87
SPC72YAL047C LRS4Q04087 347 aaKnown RBP3.35□□□□□ -1.87
SPC72YAL047C YOL073CQ08232 322 aa3.35□□□□□ -1.87
SPC72YAL047C CTF13P35203 478 aa3.34□□□□□ -1.87
SPC72YAL047C CHZ1P40019 153 aaPredicted RBP3.34□□□□□ -1.87
SPC72YAL047C BUL1P48524 976 aa3.34□□□□□ -1.87
SPC72YAL047C UBA2P52488 636 aa3.34□□□□□ -1.87
SPC72YAL047C SLI1P53304 468 aa3.34□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms