RNA–Protein interactions for RNA: YAL002W

VPS8, Transcript of Membrane-binding component of the CORVET complex, yeastyeast

Gene VPS8, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS8YAL002W YPR027CQ12079 277 aa2.45□□□□□ -2.02
VPS8YAL002W HIF1Q12373 385 aa2.45□□□□□ -2.02
VPS8YAL002W HMG1P12683 1054 aa2.45□□□□□ -2.02
VPS8YAL002W HBS1P32769 611 aaKnown RBP2.45□□□□□ -2.02
VPS8YAL002W AIM26P32858 118 aa2.45□□□□□ -2.02
VPS8YAL002W YER158CP40095 573 aa2.45□□□□□ -2.02
VPS8YAL002W SEC26P41810 973 aaKnown RBP2.45□□□□□ -2.02
VPS8YAL002W VPS53P47061 822 aa2.45□□□□□ -2.02
VPS8YAL002W MAP1Q01662 387 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
VPS8YAL002W SOG2Q08817 791 aa2.45□□□□□ -2.02
VPS8YAL002W YOR223WQ12015 292 aa2.45□□□□□ -2.02
VPS8YAL002W COQ4O13525 335 aa2.45□□□□□ -2.02
VPS8YAL002W AEP2P22136 580 aa2.45□□□□□ -2.02
VPS8YAL002W SCT1P32784 759 aa2.45□□□□□ -2.02
VPS8YAL002W NIC96P34077 839 aa2.45□□□□□ -2.02
VPS8YAL002W POA1P38218 177 aa2.45□□□□□ -2.02
VPS8YAL002W QNS1P38795 714 aaKnown RBP2.45□□□□□ -2.02
VPS8YAL002W AKR1P39010 764 aa2.45□□□□□ -2.02
VPS8YAL002W MTQ2Q03920 221 aaPredicted RBP2.45□□□□□ -2.02
VPS8YAL002W GUP2Q08929 609 aa2.45□□□□□ -2.02
VPS8YAL002W CHD1P32657 1468 aa2.45□□□□□ -2.02
VPS8YAL002W DIF1O13577 133 aa2.44□□□□□ -2.02
VPS8YAL002W KNS1P32350 737 aaPredicted RBP2.44□□□□□ -2.02
VPS8YAL002W PLC1P32383 869 aa2.44□□□□□ -2.02
VPS8YAL002W MPE1P35728 441 aaKnown RBP2.44□□□□□ -2.02
VPS8YAL002W GPT2P36148 743 aa2.44□□□□□ -2.02
VPS8YAL002W PGM2P37012 569 aaKnown RBP2.44□□□□□ -2.02
VPS8YAL002W GYP8P43570 497 aa2.44□□□□□ -2.02
VPS8YAL002W ROG3P43602 733 aa2.44□□□□□ -2.02
VPS8YAL002W SAP155P43612 1002 aa2.44□□□□□ -2.02
VPS8YAL002W SFB2P53953 876 aa2.44□□□□□ -2.02
VPS8YAL002W PHM6Q05637 104 aa2.44□□□□□ -2.02
VPS8YAL002W COG4Q06096 861 aa2.44□□□□□ -2.02
VPS8YAL002W YOR022CQ12204 715 aa2.44□□□□□ -2.02
VPS8YAL002W PDR10P51533 1564 aa2.44□□□□□ -2.02
VPS8YAL002W NUP170P38181 1502 aa2.44□□□□□ -2.02
VPS8YAL002W RPL11AP0C0W9 174 aaKnown RBP2.44□□□□□ -2.02
VPS8YAL002W RPN12P32496 274 aa2.44□□□□□ -2.02
VPS8YAL002W AFG2P32794 780 aa2.44□□□□□ -2.02
VPS8YAL002W YKL133CP36066 463 aa2.44□□□□□ -2.02
VPS8YAL002W GPP1P41277 250 aaKnown RBP2.44□□□□□ -2.02
VPS8YAL002W VTC4P47075 721 aa2.44□□□□□ -2.02
VPS8YAL002W COX18P53239 316 aa2.44□□□□□ -2.02
VPS8YAL002W SVL3Q03088 825 aaKnown RBP2.44□□□□□ -2.02
VPS8YAL002W HRQ1Q05549 1077 aa2.44□□□□□ -2.02
VPS8YAL002W RPL11BQ3E757 174 aaPredicted RBP2.44□□□□□ -2.02
VPS8YAL002W TOP2P06786 1428 aaKnown RBP2.44□□□□□ -2.02
VPS8YAL002W EDE1P34216 1381 aa2.44□□□□□ -2.02
VPS8YAL002W PDR15Q04182 1529 aaKnown RBP2.44□□□□□ -2.02
VPS8YAL002W VPS15P22219 1454 aa2.44□□□□□ -2.02
VPS8YAL002W YRF1-1P0CX20 1796 aa2.44□□□□□ -2.02
VPS8YAL002W YRF1-5P0CX21 1796 aa2.44□□□□□ -2.02
VPS8YAL002W YRF1-8P0CX22 1796 aa2.44□□□□□ -2.02
VPS8YAL002W PHO81P17442 1178 aa2.44□□□□□ -2.02
VPS8YAL002W YBR071WP38243 211 aa2.44□□□□□ -2.02
VPS8YAL002W AMN1P38285 549 aaPredicted RBP2.44□□□□□ -2.02
VPS8YAL002W IML2P47031 731 aa2.44□□□□□ -2.02
VPS8YAL002W MET14Q02196 202 aa2.44□□□□□ -2.02
VPS8YAL002W RSA3Q05942 220 aaKnown RBP2.44□□□□□ -2.02
VPS8YAL002W OSW2Q12202 724 aa2.44□□□□□ -2.02
VPS8YAL002W YKU70P32807 602 aa2.43□□□□□ -2.02
VPS8YAL002W UGA2P38067 497 aa2.43□□□□□ -2.02
VPS8YAL002W HIS6P40545 261 aa2.43□□□□□ -2.02
VPS8YAL002W MPH1P40562 993 aa2.43□□□□□ -2.02
VPS8YAL002W TAD1P53065 400 aa2.43□□□□□ -2.02
VPS8YAL002W GUP1P53154 560 aa2.43□□□□□ -2.02
VPS8YAL002W DAM1P53267 343 aa2.43□□□□□ -2.02
VPS8YAL002W ECM38Q05902 660 aaPredicted RBP2.43□□□□□ -2.02
VPS8YAL002W NBA1Q08229 501 aaKnown RBP2.43□□□□□ -2.02
VPS8YAL002W PGI1P12709 554 aaKnown RBP2.43□□□□□ -2.02
VPS8YAL002W SEC18P18759 758 aaKnown RBP2.43□□□□□ -2.02
VPS8YAL002W SPC29P33419 253 aa2.43□□□□□ -2.02
VPS8YAL002W PTH2P34222 208 aa2.43□□□□□ -2.02
VPS8YAL002W RDH54P38086 958 aa2.43□□□□□ -2.02
VPS8YAL002W GUS1P46655 708 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
VPS8YAL002W CCM1P48237 864 aaPredicted RBP2.43□□□□□ -2.02
VPS8YAL002W COG6P53959 839 aa2.43□□□□□ -2.02
VPS8YAL002W YDR444WQ04093 687 aa2.43□□□□□ -2.02
VPS8YAL002W MCH5Q08777 521 aa2.43□□□□□ -2.02
VPS8YAL002W Q0142Q9ZZW4 58 aa2.43□□□□□ -2.02
VPS8YAL002W RRM3P38766 723 aa2.43□□□□□ -2.02
VPS8YAL002W CKB2P38930 258 aa2.43□□□□□ -2.02
VPS8YAL002W IES1P43579 692 aa2.43□□□□□ -2.02
VPS8YAL002W PTA1Q01329 785 aaPredicted RBP2.43□□□□□ -2.02
VPS8YAL002W REH1Q06709 432 aa2.43□□□□□ -2.02
VPS8YAL002W YPL260WQ08977 551 aa2.43□□□□□ -2.02
VPS8YAL002W MYO4P32492 1471 aa2.43□□□□□ -2.02
VPS8YAL002W MPH2P0CD99 609 aa2.42□□□□□ -2.02
VPS8YAL002W DBP2P24783 546 aaKnown RBP2.42□□□□□ -2.02
VPS8YAL002W WHI3P34761 661 aaKnown RBP2.42□□□□□ -2.02
VPS8YAL002W KTR4P38131 464 aa2.42□□□□□ -2.02
VPS8YAL002W VID27P40157 782 aa2.42□□□□□ -2.02
VPS8YAL002W TNA1P53322 534 aa2.42□□□□□ -2.02
VPS8YAL002W LCB5Q06147 687 aaKnown RBP2.42□□□□□ -2.02
VPS8YAL002W GAS5Q08193 484 aa2.42□□□□□ -2.02
VPS8YAL002W YIG1Q08956 461 aa2.42□□□□□ -2.02
VPS8YAL002W UFD4P33202 1483 aa2.42□□□□□ -2.02
VPS8YAL002W BI4P03879 638 aa2.42□□□□□ -2.02
VPS8YAL002W APL1P27351 700 aa2.42□□□□□ -2.02
VPS8YAL002W PTP2P29461 750 aa2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 41.1 ms