RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 TMCO5BA8MYB1 307 aa21.28■■□□□ 1
SCARB2-213ENST00000638680 METAP2P50579 478 aaKnown RBP eCLIP21.28■■□□□ 1
SCARB2-213ENST00000638680 MICU3Q86XE3 530 aa21.28■■□□□ 1
SCARB2-213ENST00000638680 SLC5A1P13866 664 aa21.28■■□□□ 1
SCARB2-213ENST00000638680 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.28■■□□□ 1
SCARB2-213ENST00000638680 NSD2O96028 1365 aa21.28■■□□□ 1
SCARB2-213ENST00000638680 CCDC175P0C221 793 aa21.28■■□□□ 1
SCARB2-213ENST00000638680 TTC12Q9H892 705 aaPredicted RBP21.28■■□□□ 1
SCARB2-213ENST00000638680 KANK3Q6NY19 840 aa21.27■■□□□ 1
SCARB2-213ENST00000638680 IPO4Q8TEX9 1081 aaKnown RBP21.27■■□□□ 1
SCARB2-213ENST00000638680 DNAI1Q9UI46 699 aa21.27■■□□□ 1
SCARB2-213ENST00000638680 SYKP43405 635 aa21.27■■□□□ 1
SCARB2-213ENST00000638680 UBE4AQ14139 1066 aa21.27■■□□□ 1
SCARB2-213ENST00000638680 ESYT1Q9BSJ8 1104 aa21.27■■□□□ 1
SCARB2-213ENST00000638680 SLC26A6Q9BXS9 759 aa21.27■■□□□ 1
SCARB2-213ENST00000638680 IFT140Q96RY7 1462 aa21.26■□□□□ 0.99
SCARB2-213ENST00000638680 BRF1Q92994 677 aa21.26■□□□□ 0.99
SCARB2-213ENST00000638680 ZNF444Q8N0Y2 327 aaPredicted RBP21.26■□□□□ 0.99
SCARB2-213ENST00000638680 DNAJC25Q9H1X3 360 aa21.26■□□□□ 0.99
SCARB2-213ENST00000638680 SNRKQ9NRH2 765 aa21.26■□□□□ 0.99
SCARB2-213ENST00000638680 RHPN1Q8TCX5 695 aa21.26■□□□□ 0.99
SCARB2-213ENST00000638680 CCDC40Q4G0X9 1142 aa21.26■□□□□ 0.99
SCARB2-213ENST00000638680 DZIP1Q86YF9 867 aaKnown RBP21.25■□□□□ 0.99
SCARB2-213ENST00000638680 NCOA7Q8NI08 942 aa21.25■□□□□ 0.99
SCARB2-213ENST00000638680 KIF20AO95235 890 aa21.25■□□□□ 0.99
SCARB2-213ENST00000638680 PDE1AP54750 535 aa21.25■□□□□ 0.99
SCARB2-213ENST00000638680 RNF216Q9NWF9 866 aaPredicted RBP21.25■□□□□ 0.99
SCARB2-213ENST00000638680 DACT1Q9NYF0 836 aa21.25■□□□□ 0.99
SCARB2-213ENST00000638680 N4BP3O15049 544 aa21.25■□□□□ 0.99
SCARB2-213ENST00000638680 NEBLO76041 1014 aa21.25■□□□□ 0.99
SCARB2-213ENST00000638680 F13A1P00488 732 aa21.25■□□□□ 0.99
SCARB2-213ENST00000638680 MEIS3Q99687 375 aa21.25■□□□□ 0.99
SCARB2-213ENST00000638680 TMOD3Q9NYL9 352 aa21.25■□□□□ 0.99
SCARB2-213ENST00000638680 PIK3R4Q99570 1358 aa21.25■□□□□ 0.99
SCARB2-213ENST00000638680 FAM114A1Q8IWE2 563 aa21.25■□□□□ 0.99
SCARB2-213ENST00000638680 ARHGAP45Q92619 1136 aa21.25■□□□□ 0.99
SCARB2-213ENST00000638680 MACROD2A1Z1Q3 448 aa21.24■□□□□ 0.99
SCARB2-213ENST00000638680 DNM1Q05193 864 aaKnown RBP21.24■□□□□ 0.99
SCARB2-213ENST00000638680 RAB3GAP1Q15042 981 aa21.24■□□□□ 0.99
SCARB2-213ENST00000638680 HSP90AA4PQ58FG1 418 aa21.24■□□□□ 0.99
SCARB2-213ENST00000638680 MAGI1Q96QZ7 1491 aaPredicted RBP21.24■□□□□ 0.99
SCARB2-213ENST00000638680 ANKRD18BA2A2Z9 1011 aa21.24■□□□□ 0.99
SCARB2-213ENST00000638680 AOPEPQ8N6M6 819 aa21.24■□□□□ 0.99
SCARB2-213ENST00000638680 TCEANC2Q96MN5 208 aa21.24■□□□□ 0.99
SCARB2-213ENST00000638680 PI4KAP2A4QPH2 592 aa21.24■□□□□ 0.99
SCARB2-213ENST00000638680 PRPF4BQ13523 1007 aaKnown RBP21.24■□□□□ 0.99
SCARB2-213ENST00000638680 PI4KAP1Q8N8J0 262 aa21.24■□□□□ 0.99
SCARB2-213ENST00000638680 TNIP1Q15025 636 aa21.24■□□□□ 0.99
SCARB2-213ENST00000638680 AMPD3Q01432 767 aa21.24■□□□□ 0.99
SCARB2-213ENST00000638680 CALML4Q96GE6 196 aa21.24■□□□□ 0.99
SCARB2-213ENST00000638680 LRRC2Q9BYS8 371 aa21.24■□□□□ 0.99
SCARB2-213ENST00000638680 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.24■□□□□ 0.99
SCARB2-213ENST00000638680 TRMT112Q9UI30 125 aaKnown RBP21.24■□□□□ 0.99
SCARB2-213ENST00000638680 V9GYY5 206 aaPredicted RBP21.24■□□□□ 0.99
SCARB2-213ENST00000638680 MRC2Q9UBG0 1479 aa21.23■□□□□ 0.99
SCARB2-213ENST00000638680 NUTM2BA6NNL0 878 aaPredicted RBP21.23■□□□□ 0.99
SCARB2-213ENST00000638680 NUTM2EB1AL46 878 aaPredicted RBP21.23■□□□□ 0.99
SCARB2-213ENST00000638680 NOP2P46087 812 aaKnown RBP21.23■□□□□ 0.99
SCARB2-213ENST00000638680 ANKLE2Q86XL3 938 aa21.23■□□□□ 0.99
SCARB2-213ENST00000638680 NUTM2AQ8IVF1 878 aaPredicted RBP21.23■□□□□ 0.99
SCARB2-213ENST00000638680 ARFGAP3Q9NP61 516 aa21.23■□□□□ 0.99
SCARB2-213ENST00000638680 TCP11L1Q9NUJ3 509 aa21.23■□□□□ 0.99
SCARB2-213ENST00000638680 HSF2BPO75031 334 aa21.23■□□□□ 0.99
SCARB2-213ENST00000638680 IDEP14735 1019 aa21.23■□□□□ 0.99
SCARB2-213ENST00000638680 CCDC96Q2M329 555 aa21.23■□□□□ 0.99
SCARB2-213ENST00000638680 EHBP1Q8NDI1 1231 aa21.23■□□□□ 0.99
SCARB2-213ENST00000638680 TAOK3Q9H2K8 898 aa21.23■□□□□ 0.99
SCARB2-213ENST00000638680 ANAPC15P60006 121 aa21.23■□□□□ 0.99
SCARB2-213ENST00000638680 C16orf71Q8IYS4 520 aaPredicted RBP21.23■□□□□ 0.99
SCARB2-213ENST00000638680 WASLO00401 505 aaPredicted RBP21.22■□□□□ 0.99
SCARB2-213ENST00000638680 MYO1BO43795 1136 aa21.22■□□□□ 0.99
SCARB2-213ENST00000638680 CTAGE15A4D2H0 777 aa21.22■□□□□ 0.99
SCARB2-213ENST00000638680 CTAGE8P0CG41 777 aa21.22■□□□□ 0.99
SCARB2-213ENST00000638680 CTAGE6Q86UF2 777 aa21.22■□□□□ 0.99
SCARB2-213ENST00000638680 CTAGE4Q8IX94 777 aa21.22■□□□□ 0.99
SCARB2-213ENST00000638680 CRACR2BQ8N4Y2 399 aaPredicted RBP21.22■□□□□ 0.99
SCARB2-213ENST00000638680 KLF18A0A0U1RQI7 1052 aa21.21■□□□□ 0.99
SCARB2-213ENST00000638680 TCERG1LQ5VWI1 586 aa21.21■□□□□ 0.99
SCARB2-213ENST00000638680 PYM1Q9BRP8 204 aaKnown RBP21.21■□□□□ 0.99
SCARB2-213ENST00000638680 TTF1Q15361 905 aaPredicted RBP21.21■□□□□ 0.99
SCARB2-213ENST00000638680 MRPS27Q92552 414 aaKnown RBP21.21■□□□□ 0.99
SCARB2-213ENST00000638680 RBM8AQ9Y5S9 174 aaKnown RBP21.21■□□□□ 0.99
SCARB2-213ENST00000638680 SPTY2D1Q68D10 685 aaPredicted RBP21.21■□□□□ 0.99
SCARB2-213ENST00000638680 MCM6Q14566 821 aa21.21■□□□□ 0.99
SCARB2-213ENST00000638680 TRIM47Q96LD4 638 aa21.21■□□□□ 0.99
SCARB2-213ENST00000638680 GIGYF2Q6Y7W6 1299 aaKnown RBP21.21■□□□□ 0.99
SCARB2-213ENST00000638680 ZBTB3Q9H5J0 574 aa21.21■□□□□ 0.99
SCARB2-213ENST00000638680 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.21■□□□□ 0.99
SCARB2-213ENST00000638680 ATP5J2-PTCD1G3V325 749 aa21.2■□□□□ 0.98
SCARB2-213ENST00000638680 MFSD6Q6ZSS7 791 aa21.2■□□□□ 0.98
SCARB2-213ENST00000638680 CEP112Q8N8E3 955 aa21.2■□□□□ 0.98
SCARB2-213ENST00000638680 KCNG4Q8TDN1 519 aa21.2■□□□□ 0.98
SCARB2-213ENST00000638680 SLU7O95391 586 aaKnown RBP21.2■□□□□ 0.98
SCARB2-213ENST00000638680 RRAGBQ5VZM2 374 aa21.2■□□□□ 0.98
SCARB2-213ENST00000638680 SMC5Q8IY18 1101 aa21.2■□□□□ 0.98
SCARB2-213ENST00000638680 RSPH14Q9UHP6 348 aa21.2■□□□□ 0.98
SCARB2-213ENST00000638680 ZNF652Q9Y2D9 606 aa21.2■□□□□ 0.98
SCARB2-213ENST00000638680 SYT1P21579 422 aa21.2■□□□□ 0.98
SCARB2-213ENST00000638680 UBA7P41226 1012 aa21.2■□□□□ 0.98
SCARB2-213ENST00000638680 AFMP43652 599 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms