RNA–Protein interactions for RNA: ENST00000638514.1

KCNMA1-238, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-238ENST00000638514 RBM43Q6ZSC3 357 aaKnown RBP16.11■□□□□ 0.17
KCNMA1-238ENST00000638514 SCAND2PQ9GZW5 306 aaPredicted RBP16.11■□□□□ 0.17
KCNMA1-238ENST00000638514 DNAJC25Q9H1X3 360 aa16.11■□□□□ 0.17
KCNMA1-238ENST00000638514 TTC21AQ8NDW8 1320 aa16.11■□□□□ 0.17
KCNMA1-238ENST00000638514 SURF6O75683 361 aaKnown RBP16.1■□□□□ 0.17
KCNMA1-238ENST00000638514 ST3GAL1Q11201 340 aa16.1■□□□□ 0.17
KCNMA1-238ENST00000638514 ME3Q16798 604 aa16.1■□□□□ 0.17
KCNMA1-238ENST00000638514 CDC37L1Q7L3B6 337 aa16.1■□□□□ 0.17
KCNMA1-238ENST00000638514 LRRC8AQ8IWT6 810 aa16.1■□□□□ 0.17
KCNMA1-238ENST00000638514 NECAB1Q8N987 351 aa16.1■□□□□ 0.17
KCNMA1-238ENST00000638514 SPATA32Q96LK8 384 aa16.1■□□□□ 0.17
KCNMA1-238ENST00000638514 NPHP3Q7Z494 1330 aa16.1■□□□□ 0.17
KCNMA1-238ENST00000638514 UBTFL1P0CB47 393 aaPredicted RBP16.1■□□□□ 0.17
KCNMA1-238ENST00000638514 PDCP20941 246 aa16.1■□□□□ 0.17
KCNMA1-238ENST00000638514 ELF2Q15723 593 aa16.1■□□□□ 0.17
KCNMA1-238ENST00000638514 SLFNL1Q499Z3 407 aa16.1■□□□□ 0.17
KCNMA1-238ENST00000638514 HDGFL1Q5TGJ6 251 aa16.1■□□□□ 0.17
KCNMA1-238ENST00000638514 CREBRFQ8IUR6 639 aa16.1■□□□□ 0.17
KCNMA1-238ENST00000638514 TM6SF1Q9BZW5 370 aa16.1■□□□□ 0.17
KCNMA1-238ENST00000638514 ZSWIM6Q9HCJ5 1215 aa16.1■□□□□ 0.17
KCNMA1-238ENST00000638514 ADCK5Q3MIX3 580 aa16.09■□□□□ 0.17
KCNMA1-238ENST00000638514 PRPF40BQ6NWY9 871 aaKnown RBP16.09■□□□□ 0.17
KCNMA1-238ENST00000638514 SSH3Q8TE77 659 aa16.09■□□□□ 0.17
KCNMA1-238ENST00000638514 C9orf78Q9NZ63 289 aaPredicted RBP16.09■□□□□ 0.17
KCNMA1-238ENST00000638514 USP27XA6NNY8 438 aa16.09■□□□□ 0.17
KCNMA1-238ENST00000638514 RBM6P78332 1123 aaKnown RBP16.09■□□□□ 0.17
KCNMA1-238ENST00000638514 NYAP1Q6ZVC0 841 aa16.09■□□□□ 0.17
KCNMA1-238ENST00000638514 RHPN1Q8TCX5 695 aa16.09■□□□□ 0.17
KCNMA1-238ENST00000638514 ST7Q9NRC1 585 aa16.09■□□□□ 0.17
KCNMA1-238ENST00000638514 PPP6R1Q9UPN7 881 aa16.09■□□□□ 0.17
KCNMA1-238ENST00000638514 DLC1Q96QB1 1528 aa16.09■□□□□ 0.17
KCNMA1-238ENST00000638514 RUFY2Q8WXA3 655 aa16.09■□□□□ 0.17
KCNMA1-238ENST00000638514 TMEM131LA2VDJ0 1609 aa16.08■□□□□ 0.17
KCNMA1-238ENST00000638514 GOLGA6L19H0YKK7 550 aa16.08■□□□□ 0.17
KCNMA1-238ENST00000638514 CAVIN2O95810 425 aa16.08■□□□□ 0.17
KCNMA1-238ENST00000638514 MPRIPQ6WCQ1 1025 aa16.08■□□□□ 0.17
KCNMA1-238ENST00000638514 SIL1Q9H173 461 aa16.08■□□□□ 0.17
KCNMA1-238ENST00000638514 CPS1P31327 1500 aa16.08■□□□□ 0.16
KCNMA1-238ENST00000638514 NRKQ7Z2Y5 1582 aa16.08■□□□□ 0.16
KCNMA1-238ENST00000638514 SLU7O95391 586 aaKnown RBP16.08■□□□□ 0.16
KCNMA1-238ENST00000638514 PIP4K2AP48426 406 aaPredicted RBP16.08■□□□□ 0.16
KCNMA1-238ENST00000638514 RNF20Q5VTR2 975 aa16.08■□□□□ 0.16
KCNMA1-238ENST00000638514 BICD2Q8TD16 824 aa16.08■□□□□ 0.16
KCNMA1-238ENST00000638514 SKILP12757 684 aa16.07■□□□□ 0.16
KCNMA1-238ENST00000638514 CCDC30Q5VVM6 783 aa16.07■□□□□ 0.16
KCNMA1-238ENST00000638514 TFIP11Q9UBB9 837 aaKnown RBP16.07■□□□□ 0.16
KCNMA1-238ENST00000638514 PTH1RQ03431 593 aa16.07■□□□□ 0.16
KCNMA1-238ENST00000638514 LEO1Q8WVC0 666 aaPredicted RBP16.07■□□□□ 0.16
KCNMA1-238ENST00000638514 KIF1BPQ96EK5 621 aa16.07■□□□□ 0.16
KCNMA1-238ENST00000638514 USP44Q9H0E7 712 aa16.07■□□□□ 0.16
KCNMA1-238ENST00000638514 ARID5BQ14865 1188 aa16.06■□□□□ 0.16
KCNMA1-238ENST00000638514 C1orf141Q5JVX7 400 aa16.06■□□□□ 0.16
KCNMA1-238ENST00000638514 SARM1Q6SZW1 724 aa16.06■□□□□ 0.16
KCNMA1-238ENST00000638514 PPP1R42Q7Z4L9 355 aa16.06■□□□□ 0.16
KCNMA1-238ENST00000638514 MRFAP1L1Q96HT8 127 aa16.06■□□□□ 0.16
KCNMA1-238ENST00000638514 NR1I2O75469 434 aa16.06■□□□□ 0.16
KCNMA1-238ENST00000638514 MYL6BP14649 208 aa16.06■□□□□ 0.16
KCNMA1-238ENST00000638514 RGS22Q8NE09 1264 aa16.06■□□□□ 0.16
KCNMA1-238ENST00000638514 TPCN1Q9ULQ1 816 aa16.06■□□□□ 0.16
KCNMA1-238ENST00000638514 ZKSCAN1P17029 563 aaPredicted RBP16.06■□□□□ 0.16
KCNMA1-238ENST00000638514 BMS1Q14692 1282 aaKnown RBP16.06■□□□□ 0.16
KCNMA1-238ENST00000638514 NOL10Q9BSC4 688 aaKnown RBP16.06■□□□□ 0.16
KCNMA1-238ENST00000638514 TRMT1Q9NXH9 659 aaKnown RBP16.06■□□□□ 0.16
KCNMA1-238ENST00000638514 FOSBP53539 338 aa16.05■□□□□ 0.16
KCNMA1-238ENST00000638514 KIF2AO00139 706 aaPredicted RBP16.05■□□□□ 0.16
KCNMA1-238ENST00000638514 KCNB2Q92953 911 aa16.05■□□□□ 0.16
KCNMA1-238ENST00000638514 CCDC69A6NI79 296 aa16.05■□□□□ 0.16
KCNMA1-238ENST00000638514 LRRC59Q96AG4 307 aaKnown RBP16.05■□□□□ 0.16
KCNMA1-238ENST00000638514 LTKP29376 864 aa16.04■□□□□ 0.16
KCNMA1-238ENST00000638514 XRN1Q8IZH2 1706 aaKnown RBP16.04■□□□□ 0.16
KCNMA1-238ENST00000638514 TTC21BQ7Z4L5 1316 aa16.04■□□□□ 0.16
KCNMA1-238ENST00000638514 POLA2Q14181 598 aa16.04■□□□□ 0.16
KCNMA1-238ENST00000638514 ZNF530Q6P9A1 599 aaPredicted RBP16.04■□□□□ 0.16
KCNMA1-238ENST00000638514 CCAR2Q8N163 923 aaKnown RBP16.04■□□□□ 0.16
KCNMA1-238ENST00000638514 SECISBP2LQ93073 1101 aaKnown RBP16.04■□□□□ 0.16
KCNMA1-238ENST00000638514 ERBB3P21860 1342 aa16.04■□□□□ 0.16
KCNMA1-238ENST00000638514 GLRX3O76003 335 aaKnown RBP16.04■□□□□ 0.16
KCNMA1-238ENST00000638514 IQCB1Q15051 598 aa16.04■□□□□ 0.16
KCNMA1-238ENST00000638514 MTHFSDQ2M296 383 aaKnown RBP16.04■□□□□ 0.16
KCNMA1-238ENST00000638514 ZNF446Q9NWS9 450 aa16.04■□□□□ 0.16
KCNMA1-238ENST00000638514 NPHP1O15259 732 aa16.03■□□□□ 0.16
KCNMA1-238ENST00000638514 HTATSF1O43719 755 aaKnown RBP16.03■□□□□ 0.16
KCNMA1-238ENST00000638514 FILIP1Q7Z7B0 1213 aa16.03■□□□□ 0.16
KCNMA1-238ENST00000638514 CHMP4CQ96CF2 233 aa16.03■□□□□ 0.16
KCNMA1-238ENST00000638514 ADGRL3Q9HAR2 1447 aa16.03■□□□□ 0.16
KCNMA1-238ENST00000638514 CCZ1BP86790 482 aa16.03■□□□□ 0.16
KCNMA1-238ENST00000638514 CCZ1P86791 482 aaPredicted RBP16.03■□□□□ 0.16
KCNMA1-238ENST00000638514 MAP3K5Q99683 1374 aa16.03■□□□□ 0.16
KCNMA1-238ENST00000638514 PGBD1Q96JS3 809 aa16.03■□□□□ 0.16
KCNMA1-238ENST00000638514 FEZ2Q9UHY8 353 aaPredicted RBP16.03■□□□□ 0.16
KCNMA1-238ENST00000638514 SRGAP3O43295 1099 aa16.02■□□□□ 0.16
KCNMA1-238ENST00000638514 CYP2C19P33261 490 aa16.02■□□□□ 0.16
KCNMA1-238ENST00000638514 LARP1Q6PKG0 1096 aaKnown RBP16.02■□□□□ 0.16
KCNMA1-238ENST00000638514 TEX2Q8IWB9 1127 aa16.02■□□□□ 0.16
KCNMA1-238ENST00000638514 USP16Q9Y5T5 823 aa16.02■□□□□ 0.16
KCNMA1-238ENST00000638514 TTC41PQ6P2S7 1318 aa16.02■□□□□ 0.16
KCNMA1-238ENST00000638514 PSMA5P28066 241 aa16.02■□□□□ 0.15
KCNMA1-238ENST00000638514 NECTIN1Q15223 517 aa16.02■□□□□ 0.15
KCNMA1-238ENST00000638514 BECN2A8MW95 431 aa16.02■□□□□ 0.15
KCNMA1-238ENST00000638514 HNRNPH2P55795 449 aaKnown RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms