RNA–Protein interactions for RNA: ENST00000638443.1

ATM-226, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 2,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-226ENST00000638443 KLHDC4Q8TBB5 520 aa12.22□□□□□ -0.45
ATM-226ENST00000638443 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.22□□□□□ -0.45
ATM-226ENST00000638443 ERBB4Q15303 1308 aa12.22□□□□□ -0.45
ATM-226ENST00000638443 SALL3Q9BXA9 1300 aa12.22□□□□□ -0.45
ATM-226ENST00000638443 FAM182BQ5T319 152 aa12.22□□□□□ -0.45
ATM-226ENST00000638443 BARGINQ6ZT62 677 aa12.22□□□□□ -0.45
ATM-226ENST00000638443 MKRN3Q13064 507 aaKnown RBP12.21□□□□□ -0.45
ATM-226ENST00000638443 TBC1D9Q6ZT07 1266 aa12.21□□□□□ -0.45
ATM-226ENST00000638443 PTF1AQ7RTS3 328 aa12.21□□□□□ -0.45
ATM-226ENST00000638443 NUTM1Q86Y26 1132 aa12.21□□□□□ -0.45
ATM-226ENST00000638443 CDCA7Q9BWT1 371 aaPredicted RBP12.21□□□□□ -0.45
ATM-226ENST00000638443 ZBTB1Q9Y2K1 713 aa12.21□□□□□ -0.45
ATM-226ENST00000638443 PDE1AP54750 535 aa12.2□□□□□ -0.46
ATM-226ENST00000638443 MTX1Q13505 466 aa12.2□□□□□ -0.46
ATM-226ENST00000638443 USP21Q9UK80 565 aa12.2□□□□□ -0.46
ATM-226ENST00000638443 NOP58Q9Y2X3 529 aaKnown RBP12.2□□□□□ -0.46
ATM-226ENST00000638443 A0A087WZG4 1122 aa12.2□□□□□ -0.46
ATM-226ENST00000638443 VPS72Q15906 364 aa12.2□□□□□ -0.46
ATM-226ENST00000638443 FNBP4Q8N3X1 1017 aaPredicted RBP12.2□□□□□ -0.46
ATM-226ENST00000638443 RHPN1Q8TCX5 695 aa12.2□□□□□ -0.46
ATM-226ENST00000638443 TRAIPQ9BWF2 469 aa12.2□□□□□ -0.46
ATM-226ENST00000638443 EP400Q96L91 3159 aa12.2□□□□□ -0.46
ATM-226ENST00000638443 CYP19A1P11511 503 aaPredicted RBP12.19□□□□□ -0.46
ATM-226ENST00000638443 SDSP20132 328 aa12.19□□□□□ -0.46
ATM-226ENST00000638443 SPOCK2Q92563 424 aa12.19□□□□□ -0.46
ATM-226ENST00000638443 TBC1D32Q96NH3 1257 aa12.19□□□□□ -0.46
ATM-226ENST00000638443 SIL1Q9H173 461 aa12.19□□□□□ -0.46
ATM-226ENST00000638443 ZNF219Q9P2Y4 722 aaPredicted RBP12.19□□□□□ -0.46
ATM-226ENST00000638443 MX1P20591 662 aa12.19□□□□□ -0.46
ATM-226ENST00000638443 CASP7P55210 303 aa12.19□□□□□ -0.46
ATM-226ENST00000638443 BCL11BQ9C0K0 894 aaPredicted RBP12.19□□□□□ -0.46
ATM-226ENST00000638443 SPATA31A6Q5VVP1 1343 aa12.18□□□□□ -0.46
ATM-226ENST00000638443 KCNQ4P56696 695 aa12.18□□□□□ -0.46
ATM-226ENST00000638443 MKRN4PQ13434 485 aaPredicted RBP12.18□□□□□ -0.46
ATM-226ENST00000638443 STARD3NLO95772 234 aa12.17□□□□□ -0.46
ATM-226ENST00000638443 OS9Q13438 667 aaPredicted RBP12.17□□□□□ -0.46
ATM-226ENST00000638443 HLFQ16534 295 aa12.17□□□□□ -0.46
ATM-226ENST00000638443 MEX3CQ5U5Q3 659 aaKnown RBP12.17□□□□□ -0.46
ATM-226ENST00000638443 TUBGCP6Q96RT7 1819 aa12.17□□□□□ -0.46
ATM-226ENST00000638443 ITPK1Q13572 414 aa12.17□□□□□ -0.46
ATM-226ENST00000638443 IL27Q8NEV9 243 aa12.17□□□□□ -0.46
ATM-226ENST00000638443 UPF2Q9HAU5 1272 aaKnown RBP12.17□□□□□ -0.46
ATM-226ENST00000638443 PALLDQ8WX93 1383 aa12.17□□□□□ -0.46
ATM-226ENST00000638443 CDC45O75419 566 aa12.16□□□□□ -0.46
ATM-226ENST00000638443 MAP4K4O95819 1239 aaPredicted RBP12.16□□□□□ -0.46
ATM-226ENST00000638443 KIF1BPQ96EK5 621 aa12.16□□□□□ -0.46
ATM-226ENST00000638443 C22orf23Q9BZE7 217 aa12.16□□□□□ -0.46
ATM-226ENST00000638443 GZF1Q9H116 711 aaPredicted RBP12.16□□□□□ -0.46
ATM-226ENST00000638443 AFF2P51816 1311 aa12.16□□□□□ -0.46
ATM-226ENST00000638443 SASH1O94885 1247 aa12.16□□□□□ -0.46
ATM-226ENST00000638443 GPTP24298 496 aa12.16□□□□□ -0.46
ATM-226ENST00000638443 ATP6V1AP38606 617 aa12.16□□□□□ -0.46
ATM-226ENST00000638443 OSBPL3Q9H4L5 887 aa12.16□□□□□ -0.46
ATM-226ENST00000638443 CWC25Q9NXE8 425 aaPredicted RBP12.16□□□□□ -0.46
ATM-226ENST00000638443 THSD7AQ9UPZ6 1657 aa12.15□□□□□ -0.46
ATM-226ENST00000638443 LOC102724428A0A0B4J2F2 783 aa12.15□□□□□ -0.46
ATM-226ENST00000638443 RAB11FIP3O75154 756 aa12.15□□□□□ -0.46
ATM-226ENST00000638443 SIK1P57059 783 aa12.15□□□□□ -0.46
ATM-226ENST00000638443 SYNE4Q8N205 404 aa12.15□□□□□ -0.46
ATM-226ENST00000638443 TEX13AQ9BXU3 409 aaPredicted RBP12.15□□□□□ -0.46
ATM-226ENST00000638443 CWC22Q9HCG8 908 aaKnown RBP12.15□□□□□ -0.46
ATM-226ENST00000638443 BRPF3Q9ULD4 1205 aa12.15□□□□□ -0.46
ATM-226ENST00000638443 TBC1D2BQ9UPU7 963 aa12.15□□□□□ -0.46
ATM-226ENST00000638443 RFX5P48382 616 aaPredicted RBP12.14□□□□□ -0.47
ATM-226ENST00000638443 KIF6Q6ZMV9 814 aa12.14□□□□□ -0.47
ATM-226ENST00000638443 TLR7Q9NYK1 1049 aaKnown RBP12.14□□□□□ -0.47
ATM-226ENST00000638443 CHMP3Q9Y3E7 222 aa12.14□□□□□ -0.47
ATM-226ENST00000638443 H7C1W4 665 aa12.14□□□□□ -0.47
ATM-226ENST00000638443 FOXO4P98177 505 aa12.14□□□□□ -0.47
ATM-226ENST00000638443 RABL6Q3YEC7 729 aaPredicted RBP12.14□□□□□ -0.47
ATM-226ENST00000638443 LMBR1LQ6UX01 489 aa12.14□□□□□ -0.47
ATM-226ENST00000638443 SMIM5Q71RC9 77 aa12.14□□□□□ -0.47
ATM-226ENST00000638443 PI4K2BQ8TCG2 481 aa12.14□□□□□ -0.47
ATM-226ENST00000638443 ISCA1Q9BUE6 129 aa12.14□□□□□ -0.47
ATM-226ENST00000638443 GPBP1L1Q9HC44 474 aaPredicted RBP12.14□□□□□ -0.47
ATM-226ENST00000638443 MAP3K15Q6ZN16 1313 aa12.14□□□□□ -0.47
ATM-226ENST00000638443 CRKLP46109 303 aaKnown RBP12.13□□□□□ -0.47
ATM-226ENST00000638443 PTPN12Q05209 780 aaKnown RBP12.13□□□□□ -0.47
ATM-226ENST00000638443 TCIRG1Q13488 830 aa12.13□□□□□ -0.47
ATM-226ENST00000638443 INTS5Q6P9B9 1019 aaKnown RBP12.13□□□□□ -0.47
ATM-226ENST00000638443 FAM89AQ96GI7 184 aa12.13□□□□□ -0.47
ATM-226ENST00000638443 DDRGK1Q96HY6 314 aa12.13□□□□□ -0.47
ATM-226ENST00000638443 CCDC85AQ96PX6 553 aaPredicted RBP12.13□□□□□ -0.47
ATM-226ENST00000638443 TRIM6-TRIM34B2RNG4 842 aa12.13□□□□□ -0.47
ATM-226ENST00000638443 CCDC191Q8NCU4 936 aa12.13□□□□□ -0.47
ATM-226ENST00000638443 RILPL2Q969X0 211 aa12.13□□□□□ -0.47
ATM-226ENST00000638443 STAP2Q9UGK3 403 aa12.13□□□□□ -0.47
ATM-226ENST00000638443 AACSQ86V21 672 aa12.12□□□□□ -0.47
ATM-226ENST00000638443 DZIP3Q86Y13 1208 aaKnown RBP12.12□□□□□ -0.47
ATM-226ENST00000638443 EAF2Q96CJ1 260 aaPredicted RBP12.12□□□□□ -0.47
ATM-226ENST00000638443 CCDC8Q9H0W5 538 aaPredicted RBP12.12□□□□□ -0.47
ATM-226ENST00000638443 MYH14Q7Z406 1995 aaKnown RBP12.12□□□□□ -0.47
ATM-226ENST00000638443 G3BP1Q13283 466 aaKnown RBP eCLIP12.11□□□□□ -0.47
ATM-226ENST00000638443 HSP90AB4PQ58FF6 505 aa12.11□□□□□ -0.47
ATM-226ENST00000638443 GIGYF2Q6Y7W6 1299 aaKnown RBP12.11□□□□□ -0.47
ATM-226ENST00000638443 ZNF594Q96JF6 807 aaPredicted RBP12.11□□□□□ -0.47
ATM-226ENST00000638443 ZFP91Q96JP5 570 aaPredicted RBP12.11□□□□□ -0.47
ATM-226ENST00000638443 GJD4Q96KN9 370 aaPredicted RBP12.11□□□□□ -0.47
ATM-226ENST00000638443 IL25Q9H293 177 aa12.11□□□□□ -0.47
ATM-226ENST00000638443 BCCIPQ9P287 314 aaKnown RBP eCLIP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms