RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 A0A1W2PRG0 241 aa10.46□□□□□ -0.74
CSMD1-218ENST00000635120 USHBP1Q8N6Y0 703 aa10.46□□□□□ -0.74
CSMD1-218ENST00000635120 HYPKQ9NX55 129 aa10.46□□□□□ -0.74
CSMD1-218ENST00000635120 CTTNBP2Q8WZ74 1663 aa10.46□□□□□ -0.74
CSMD1-218ENST00000635120 FEZ1Q99689 392 aa10.45□□□□□ -0.74
CSMD1-218ENST00000635120 EXOC1Q9NV70 894 aa10.45□□□□□ -0.74
CSMD1-218ENST00000635120 BAG4O95429 457 aaKnown RBP10.45□□□□□ -0.74
CSMD1-218ENST00000635120 HCLS1P14317 486 aaPredicted RBP10.45□□□□□ -0.74
CSMD1-218ENST00000635120 IDEP14735 1019 aa10.45□□□□□ -0.74
CSMD1-218ENST00000635120 HAND2P61296 217 aa10.45□□□□□ -0.74
CSMD1-218ENST00000635120 TAF7Q15545 349 aaPredicted RBP10.45□□□□□ -0.74
CSMD1-218ENST00000635120 TROQ12816 1431 aaPredicted RBP10.45□□□□□ -0.74
CSMD1-218ENST00000635120 ANKRD18BA2A2Z9 1011 aa10.45□□□□□ -0.74
CSMD1-218ENST00000635120 MYCNP04198 464 aaPredicted RBP10.45□□□□□ -0.74
CSMD1-218ENST00000635120 GRIPAP1Q4V328 841 aa10.45□□□□□ -0.74
CSMD1-218ENST00000635120 ZNF444Q8N0Y2 327 aaPredicted RBP10.45□□□□□ -0.74
CSMD1-218ENST00000635120 C6orf163Q5TEZ5 329 aa10.45□□□□□ -0.74
CSMD1-218ENST00000635120 PAIP2Q9BPZ3 127 aaKnown RBP10.45□□□□□ -0.74
CSMD1-218ENST00000635120 SLC52A1Q9NWF4 448 aa10.45□□□□□ -0.74
CSMD1-218ENST00000635120 CAVIN2O95810 425 aa10.45□□□□□ -0.74
CSMD1-218ENST00000635120 PAXBP1Q9Y5B6 917 aa10.45□□□□□ -0.74
CSMD1-218ENST00000635120 CCDC171Q6TFL3 1326 aa10.45□□□□□ -0.74
CSMD1-218ENST00000635120 KRT222Q8N1A0 295 aa10.45□□□□□ -0.74
CSMD1-218ENST00000635120 DRC1Q96MC2 740 aa10.45□□□□□ -0.74
CSMD1-218ENST00000635120 SLC4A8Q2Y0W8 1093 aa10.45□□□□□ -0.74
CSMD1-218ENST00000635120 WDR78Q5VTH9 848 aa10.45□□□□□ -0.74
CSMD1-218ENST00000635120 TIGD1Q96MW7 591 aa10.45□□□□□ -0.74
CSMD1-218ENST00000635120 TTC21AQ8NDW8 1320 aa10.45□□□□□ -0.74
CSMD1-218ENST00000635120 KIF20AO95235 890 aa10.44□□□□□ -0.74
CSMD1-218ENST00000635120 TRIM27P14373 513 aa10.44□□□□□ -0.74
CSMD1-218ENST00000635120 SRRTQ9BXP5 876 aaKnown RBP10.44□□□□□ -0.74
CSMD1-218ENST00000635120 USP16Q9Y5T5 823 aa10.44□□□□□ -0.74
CSMD1-218ENST00000635120 GOLIM4O00461 696 aa10.44□□□□□ -0.74
CSMD1-218ENST00000635120 PRC1O43663 620 aa10.44□□□□□ -0.74
CSMD1-218ENST00000635120 FERP16591 822 aa10.44□□□□□ -0.74
CSMD1-218ENST00000635120 ZC3H6P61129 1189 aaKnown RBP10.44□□□□□ -0.74
CSMD1-218ENST00000635120 TRMT1LQ7Z2T5 733 aaKnown RBP10.44□□□□□ -0.74
CSMD1-218ENST00000635120 RPGRQ92834 1020 aaKnown RBP10.44□□□□□ -0.74
CSMD1-218ENST00000635120 TSNARE1Q96NA8 513 aa10.44□□□□□ -0.74
CSMD1-218ENST00000635120 SYNCQ9H7C4 482 aa10.44□□□□□ -0.74
CSMD1-218ENST00000635120 DNAAF4Q8WXU2 420 aa10.44□□□□□ -0.74
CSMD1-218ENST00000635120 TRIM47Q96LD4 638 aa10.44□□□□□ -0.74
CSMD1-218ENST00000635120 N4BP3O15049 544 aa10.44□□□□□ -0.74
CSMD1-218ENST00000635120 HSPA4P34932 840 aa10.44□□□□□ -0.74
CSMD1-218ENST00000635120 AMPD3Q01432 767 aa10.44□□□□□ -0.74
CSMD1-218ENST00000635120 METAP2P50579 478 aaKnown RBP eCLIP10.44□□□□□ -0.74
CSMD1-218ENST00000635120 UBA7P41226 1012 aa10.44□□□□□ -0.74
CSMD1-218ENST00000635120 SYKP43405 635 aa10.44□□□□□ -0.74
CSMD1-218ENST00000635120 TBC1D5Q92609 795 aa10.44□□□□□ -0.74
CSMD1-218ENST00000635120 EVI5LQ96CN4 794 aa10.44□□□□□ -0.74
CSMD1-218ENST00000635120 SLC26A6Q9BXS9 759 aa10.44□□□□□ -0.74
CSMD1-218ENST00000635120 SAMM50Q9Y512 469 aa10.44□□□□□ -0.74
CSMD1-218ENST00000635120 MCM6Q14566 821 aa10.43□□□□□ -0.74
CSMD1-218ENST00000635120 TTC16Q8NEE8 873 aa10.43□□□□□ -0.74
CSMD1-218ENST00000635120 ARFGAP3Q9NP61 516 aa10.43□□□□□ -0.74
CSMD1-218ENST00000635120 GIMAP6Q6P9H5 292 aa10.43□□□□□ -0.74
CSMD1-218ENST00000635120 NUDT16Q96DE0 195 aaKnown RBP10.43□□□□□ -0.74
CSMD1-218ENST00000635120 ARHGEF11O15085 1522 aa10.43□□□□□ -0.74
CSMD1-218ENST00000635120 GTF2A1P52655 376 aaPredicted RBP10.43□□□□□ -0.74
CSMD1-218ENST00000635120 TTLL12Q14166 644 aaPredicted RBP10.43□□□□□ -0.74
CSMD1-218ENST00000635120 BMS1Q14692 1282 aaKnown RBP10.43□□□□□ -0.74
CSMD1-218ENST00000635120 MFSD6Q6ZSS7 791 aa10.43□□□□□ -0.74
CSMD1-218ENST00000635120 SLF2Q8IX21 1173 aa10.43□□□□□ -0.74
CSMD1-218ENST00000635120 ANKS4BQ8N8V4 417 aa10.43□□□□□ -0.74
CSMD1-218ENST00000635120 ORC3Q9UBD5 711 aaPredicted RBP10.43□□□□□ -0.74
CSMD1-218ENST00000635120 PIP4K2BP78356 416 aa10.43□□□□□ -0.74
CSMD1-218ENST00000635120 BICD1Q96G01 975 aa10.43□□□□□ -0.74
CSMD1-218ENST00000635120 MMRN2Q9H8L6 949 aa10.43□□□□□ -0.74
CSMD1-218ENST00000635120 CKAP4Q07065 602 aaKnown RBP10.43□□□□□ -0.74
CSMD1-218ENST00000635120 SREK1Q8WXA9 508 aaKnown RBP10.43□□□□□ -0.74
CSMD1-218ENST00000635120 AKR1B10O60218 316 aa10.43□□□□□ -0.74
CSMD1-218ENST00000635120 CCDC102BQ68D86 513 aa10.43□□□□□ -0.74
CSMD1-218ENST00000635120 MSL1Q68DK7 614 aa10.43□□□□□ -0.74
CSMD1-218ENST00000635120 RASAL2Q9UJF2 1139 aa10.43□□□□□ -0.74
CSMD1-218ENST00000635120 PTPRCP08575 1304 aa10.43□□□□□ -0.74
CSMD1-218ENST00000635120 TBCAO75347 108 aaKnown RBP10.43□□□□□ -0.74
CSMD1-218ENST00000635120 HSP90AA4PQ58FG1 418 aa10.43□□□□□ -0.74
CSMD1-218ENST00000635120 PRIMPOLQ96LW4 560 aa10.43□□□□□ -0.74
CSMD1-218ENST00000635120 CCDC155Q8N6L0 562 aa10.43□□□□□ -0.74
CSMD1-218ENST00000635120 VGLL3A8MV65 326 aa10.42□□□□□ -0.74
CSMD1-218ENST00000635120 KANK3Q6NY19 840 aa10.42□□□□□ -0.74
CSMD1-218ENST00000635120 NSRP1Q9H0G5 558 aaKnown RBP10.42□□□□□ -0.74
CSMD1-218ENST00000635120 CNPY2Q9Y2B0 182 aa10.42□□□□□ -0.74
CSMD1-218ENST00000635120 ZNF830Q96NB3 372 aaPredicted RBP10.42□□□□□ -0.74
CSMD1-218ENST00000635120 ACTN2P35609 894 aa10.42□□□□□ -0.74
CSMD1-218ENST00000635120 ANO6Q4KMQ2 910 aa10.42□□□□□ -0.74
CSMD1-218ENST00000635120 MPRIPQ6WCQ1 1025 aa10.42□□□□□ -0.74
CSMD1-218ENST00000635120 PYM1Q9BRP8 204 aaKnown RBP10.42□□□□□ -0.74
CSMD1-218ENST00000635120 CTAGE9A4FU28 777 aa10.42□□□□□ -0.74
CSMD1-218ENST00000635120 STXBP4Q6ZWJ1 553 aa10.42□□□□□ -0.74
CSMD1-218ENST00000635120 VAT1LQ9HCJ6 419 aa10.42□□□□□ -0.74
CSMD1-218ENST00000635120 RPGRIP1LQ68CZ1 1315 aa10.42□□□□□ -0.74
CSMD1-218ENST00000635120 UBASH3AP57075 661 aa10.42□□□□□ -0.74
CSMD1-218ENST00000635120 MXRA7P84157 204 aa10.42□□□□□ -0.74
CSMD1-218ENST00000635120 IFI16Q16666 785 aaKnown RBP10.42□□□□□ -0.74
CSMD1-218ENST00000635120 HMG20BQ9P0W2 317 aa10.42□□□□□ -0.74
CSMD1-218ENST00000635120 TRMT112Q9UI30 125 aaKnown RBP10.42□□□□□ -0.74
CSMD1-218ENST00000635120 NESP48681 1621 aa10.42□□□□□ -0.74
CSMD1-218ENST00000635120 FBF1Q8TES7 1133 aa10.42□□□□□ -0.74
CSMD1-218ENST00000635120 C11orf95C9JLR9 678 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms