RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 FOXD4L4Q8WXT5 416 aaPredicted RBP9.71□□□□□ -0.86
GPC3-204ENST00000631057 TM6SF1Q9BZW5 370 aa9.71□□□□□ -0.86
GPC3-204ENST00000631057 ANO8Q9HCE9 1232 aaPredicted RBP9.71□□□□□ -0.86
GPC3-204ENST00000631057 NLRP2Q9NX02 1062 aa9.71□□□□□ -0.86
GPC3-204ENST00000631057 LIMCH1Q9UPQ0 1083 aa9.71□□□□□ -0.86
GPC3-204ENST00000631057 PA2G4Q9UQ80 394 aaKnown RBP9.71□□□□□ -0.86
GPC3-204ENST00000631057 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.71□□□□□ -0.86
GPC3-204ENST00000631057 PRAMEF22A3QJZ6 481 aa9.7□□□□□ -0.86
GPC3-204ENST00000631057 PHF14O94880 888 aa9.7□□□□□ -0.86
GPC3-204ENST00000631057 ATF3P18847 181 aa9.7□□□□□ -0.86
GPC3-204ENST00000631057 PDIA6Q15084 440 aa9.7□□□□□ -0.86
GPC3-204ENST00000631057 CADPS2Q86UW7 1296 aa9.7□□□□□ -0.86
GPC3-204ENST00000631057 RASEFQ8IZ41 740 aa9.7□□□□□ -0.86
GPC3-204ENST00000631057 KCNB2Q92953 911 aa9.7□□□□□ -0.86
GPC3-204ENST00000631057 BICC1Q9H694 974 aaKnown RBP9.7□□□□□ -0.86
GPC3-204ENST00000631057 TMEM63CQ9P1W3 806 aa9.7□□□□□ -0.86
GPC3-204ENST00000631057 RBM27Q9P2N5 1060 aaKnown RBP9.7□□□□□ -0.86
GPC3-204ENST00000631057 ZBTB12Q9Y330 459 aaPredicted RBP9.7□□□□□ -0.86
GPC3-204ENST00000631057 MEGF6O75095 1541 aa9.69□□□□□ -0.86
GPC3-204ENST00000631057 TMEM94Q12767 1356 aa9.69□□□□□ -0.86
GPC3-204ENST00000631057 RPAP1Q9BWH6 1393 aaPredicted RBP9.69□□□□□ -0.86
GPC3-204ENST00000631057 CCDC171Q6TFL3 1326 aa9.69□□□□□ -0.86
GPC3-204ENST00000631057 ABCB7O75027 752 aa9.69□□□□□ -0.86
GPC3-204ENST00000631057 PHKG2P15735 406 aa9.69□□□□□ -0.86
GPC3-204ENST00000631057 CASTP20810 708 aaKnown RBP9.69□□□□□ -0.86
GPC3-204ENST00000631057 AK2P54819 239 aa9.69□□□□□ -0.86
GPC3-204ENST00000631057 ZC3H6P61129 1189 aaKnown RBP9.69□□□□□ -0.86
GPC3-204ENST00000631057 AIMP1Q12904 312 aaKnown RBP9.69□□□□□ -0.86
GPC3-204ENST00000631057 HS1BP3Q53T59 392 aa9.69□□□□□ -0.86
GPC3-204ENST00000631057 VPS53Q5VIR6 699 aa9.69□□□□□ -0.86
GPC3-204ENST00000631057 IFNL2Q8IZJ0 200 aa9.69□□□□□ -0.86
GPC3-204ENST00000631057 TMEM87AQ8NBN3 555 aa9.69□□□□□ -0.86
GPC3-204ENST00000631057 RNF25Q96BH1 459 aaPredicted RBP9.69□□□□□ -0.86
GPC3-204ENST00000631057 KAZALD1Q96I82 304 aa9.69□□□□□ -0.86
GPC3-204ENST00000631057 ZSCAN31Q96LW9 406 aaPredicted RBP9.69□□□□□ -0.86
GPC3-204ENST00000631057 SH2B1Q9NRF2 756 aaPredicted RBP9.69□□□□□ -0.86
GPC3-204ENST00000631057 RYDENQ9NUL5 291 aaKnown RBP9.69□□□□□ -0.86
GPC3-204ENST00000631057 CYP46A1Q9Y6A2 500 aa9.69□□□□□ -0.86
GPC3-204ENST00000631057 STRCP1A6NGW2 1772 aa9.69□□□□□ -0.86
GPC3-204ENST00000631057 COL15A1P39059 1388 aa9.68□□□□□ -0.86
GPC3-204ENST00000631057 ERBB4Q15303 1308 aa9.68□□□□□ -0.86
GPC3-204ENST00000631057 NEURL1BA8MQ27 555 aa9.68□□□□□ -0.86
GPC3-204ENST00000631057 SASH1O94885 1247 aa9.68□□□□□ -0.86
GPC3-204ENST00000631057 IGKV5-2P06315 115 aa9.68□□□□□ -0.86
GPC3-204ENST00000631057 ZKSCAN1P17029 563 aaPredicted RBP9.68□□□□□ -0.86
GPC3-204ENST00000631057 PRIM1P49642 420 aaKnown RBP9.68□□□□□ -0.86
GPC3-204ENST00000631057 RUFY3Q7L099 469 aa9.68□□□□□ -0.86
GPC3-204ENST00000631057 XAGE3Q8WTP9 111 aa9.68□□□□□ -0.86
GPC3-204ENST00000631057 JAKMIP1Q96N16 626 aaKnown RBP9.68□□□□□ -0.86
GPC3-204ENST00000631057 METTL22Q9BUU2 404 aaPredicted RBP9.68□□□□□ -0.86
GPC3-204ENST00000631057 RBSNQ9H1K0 784 aa9.68□□□□□ -0.86
GPC3-204ENST00000631057 SMC3Q9UQE7 1217 aa9.68□□□□□ -0.86
GPC3-204ENST00000631057 ATP6V1DQ9Y5K8 247 aa9.68□□□□□ -0.86
GPC3-204ENST00000631057 TNS3Q68CZ2 1445 aa9.68□□□□□ -0.86
GPC3-204ENST00000631057 SYCE3A1L190 88 aa9.67□□□□□ -0.86
GPC3-204ENST00000631057 SNRPA1P09661 255 aaKnown RBP9.67□□□□□ -0.86
GPC3-204ENST00000631057 ZSCAN22P10073 491 aaPredicted RBP9.67□□□□□ -0.86
GPC3-204ENST00000631057 PTH1RQ03431 593 aa9.67□□□□□ -0.86
GPC3-204ENST00000631057 SLC39A6Q13433 755 aa9.67□□□□□ -0.86
GPC3-204ENST00000631057 GCKRQ14397 625 aa9.67□□□□□ -0.86
GPC3-204ENST00000631057 PRPF40BQ6NWY9 871 aaKnown RBP9.67□□□□□ -0.86
GPC3-204ENST00000631057 TTC5Q8N0Z6 440 aa9.67□□□□□ -0.86
GPC3-204ENST00000631057 DCAF5Q96JK2 942 aa9.67□□□□□ -0.86
GPC3-204ENST00000631057 CHAMP1Q96JM3 812 aa9.67□□□□□ -0.86
GPC3-204ENST00000631057 ZSWIM6Q9HCJ5 1215 aa9.67□□□□□ -0.86
GPC3-204ENST00000631057 SNRKQ9NRH2 765 aa9.67□□□□□ -0.86
GPC3-204ENST00000631057 PDRG1Q9NUG6 133 aa9.67□□□□□ -0.86
GPC3-204ENST00000631057 STX6O43752 255 aa9.67□□□□□ -0.86
GPC3-204ENST00000631057 CSB-PGBD3P0DP91 1061 aa9.67□□□□□ -0.86
GPC3-204ENST00000631057 PDIA4P13667 645 aaKnown RBP9.67□□□□□ -0.86
GPC3-204ENST00000631057 PSMA5P28066 241 aa9.67□□□□□ -0.86
GPC3-204ENST00000631057 KCNJ4P48050 445 aa9.67□□□□□ -0.86
GPC3-204ENST00000631057 CSPP1Q1MSJ5 1256 aa9.67□□□□□ -0.86
GPC3-204ENST00000631057 RNF20Q5VTR2 975 aa9.67□□□□□ -0.86
GPC3-204ENST00000631057 COPS6Q7L5N1 327 aa9.67□□□□□ -0.86
GPC3-204ENST00000631057 ZSCAN30Q86W11 494 aa9.67□□□□□ -0.86
GPC3-204ENST00000631057 NFATC2IPQ8NCF5 419 aa9.67□□□□□ -0.86
GPC3-204ENST00000631057 EAF2Q96CJ1 260 aaPredicted RBP9.67□□□□□ -0.86
GPC3-204ENST00000631057 PDLIM2Q96JY6 352 aa9.67□□□□□ -0.86
GPC3-204ENST00000631057 FMNL2Q96PY5 1086 aa9.67□□□□□ -0.86
GPC3-204ENST00000631057 MYD88Q99836 296 aa9.67□□□□□ -0.86
GPC3-204ENST00000631057 TSPY26PQ9H489 355 aa9.67□□□□□ -0.86
GPC3-204ENST00000631057 NSFL1CQ9UNZ2 370 aaKnown RBP9.67□□□□□ -0.86
GPC3-204ENST00000631057 RBM8AQ9Y5S9 174 aaKnown RBP9.67□□□□□ -0.86
GPC3-204ENST00000631057 RFX7Q2KHR2 1363 aa9.66□□□□□ -0.86
GPC3-204ENST00000631057 UBR2Q8IWV8 1755 aa9.66□□□□□ -0.86
GPC3-204ENST00000631057 MYL6BP14649 208 aa9.66□□□□□ -0.86
GPC3-204ENST00000631057 SYT1P21579 422 aa9.66□□□□□ -0.86
GPC3-204ENST00000631057 NMIQ13287 307 aaPredicted RBP9.66□□□□□ -0.86
GPC3-204ENST00000631057 NECTIN1Q15223 517 aa9.66□□□□□ -0.86
GPC3-204ENST00000631057 CREB3L3Q68CJ9 461 aa9.66□□□□□ -0.86
GPC3-204ENST00000631057 ANKRD13DQ6ZTN6 518 aa9.66□□□□□ -0.86
GPC3-204ENST00000631057 USP48Q86UV5 1035 aa9.66□□□□□ -0.86
GPC3-204ENST00000631057 MAP4K1Q92918 833 aa9.66□□□□□ -0.86
GPC3-204ENST00000631057 ZNF496Q96IT1 587 aaPredicted RBP9.66□□□□□ -0.86
GPC3-204ENST00000631057 FSD1Q9BTV5 496 aa9.66□□□□□ -0.86
GPC3-204ENST00000631057 CCDC8Q9H0W5 538 aaPredicted RBP9.66□□□□□ -0.86
GPC3-204ENST00000631057 COPRSQ9NQ92 184 aa9.66□□□□□ -0.86
GPC3-204ENST00000631057 NUP188Q5SRE5 1749 aa9.66□□□□□ -0.86
GPC3-204ENST00000631057 CPDO75976 1380 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms