RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 PODNQ7Z5L7 613 aa6.02□□□□□ -1.45
SDCBP-213ENST00000630925 JAMLQ86YT9 394 aa6.02□□□□□ -1.45
SDCBP-213ENST00000630925 RNF135Q8IUD6 432 aa6.02□□□□□ -1.45
SDCBP-213ENST00000630925 NFATC2IPQ8NCF5 419 aa6.02□□□□□ -1.45
SDCBP-213ENST00000630925 TRIM44Q96DX7 344 aaPredicted RBP6.02□□□□□ -1.45
SDCBP-213ENST00000630925 KIF12Q96FN5 646 aa6.02□□□□□ -1.45
SDCBP-213ENST00000630925 TOPBP1Q92547 1522 aa6.01□□□□□ -1.45
SDCBP-213ENST00000630925 USP17L5A8MUK1 530 aa6.01□□□□□ -1.45
SDCBP-213ENST00000630925 TREHO43280 583 aa6.01□□□□□ -1.45
SDCBP-213ENST00000630925 GJA5P36382 358 aa6.01□□□□□ -1.45
SDCBP-213ENST00000630925 GJA8P48165 433 aa6.01□□□□□ -1.45
SDCBP-213ENST00000630925 GRAMD1BQ3KR37 738 aa6.01□□□□□ -1.45
SDCBP-213ENST00000630925 ERAP2Q6P179 960 aa6.01□□□□□ -1.45
SDCBP-213ENST00000630925 SPNS2Q8IVW8 549 aa6.01□□□□□ -1.45
SDCBP-213ENST00000630925 SUGP1Q8IWZ8 645 aaKnown RBP6.01□□□□□ -1.45
SDCBP-213ENST00000630925 ZNF654Q8IZM8 581 aa6.01□□□□□ -1.45
SDCBP-213ENST00000630925 CABLES1Q8TDN4 633 aa6.01□□□□□ -1.45
SDCBP-213ENST00000630925 EPS8L1Q8TE68 723 aa6.01□□□□□ -1.45
SDCBP-213ENST00000630925 E2F7Q96AV8 911 aa6.01□□□□□ -1.45
SDCBP-213ENST00000630925 AGBL1Q96MI9 1066 aa6.01□□□□□ -1.45
SDCBP-213ENST00000630925 SRPK1Q96SB4 655 aaKnown RBP6.01□□□□□ -1.45
SDCBP-213ENST00000630925 TMEM121BQ9BXQ6 578 aaPredicted RBP6.01□□□□□ -1.45
SDCBP-213ENST00000630925 TSPYL2Q9H2G4 693 aaPredicted RBP6.01□□□□□ -1.45
SDCBP-213ENST00000630925 ABCF2Q9UG63 623 aa6.01□□□□□ -1.45
SDCBP-213ENST00000630925 MROH2BQ7Z745 1585 aa6□□□□□ -1.45
SDCBP-213ENST00000630925 ALDH1L1O75891 902 aa6□□□□□ -1.45
SDCBP-213ENST00000630925 IGHDP01880 384 aa6□□□□□ -1.45
SDCBP-213ENST00000630925 CASP2P42575 452 aa6□□□□□ -1.45
SDCBP-213ENST00000630925 TDO2P48775 406 aa6□□□□□ -1.45
SDCBP-213ENST00000630925 CTDSPL2Q05D32 466 aa6□□□□□ -1.45
SDCBP-213ENST00000630925 OCLNQ16625 522 aa6□□□□□ -1.45
SDCBP-213ENST00000630925 VPS37DQ86XT2 251 aa6□□□□□ -1.45
SDCBP-213ENST00000630925 ANKMY2Q8IV38 441 aa6□□□□□ -1.45
SDCBP-213ENST00000630925 SH3TC2Q8TF17 1288 aa6□□□□□ -1.45
SDCBP-213ENST00000630925 TTC14Q96N46 770 aa6□□□□□ -1.45
SDCBP-213ENST00000630925 CARD10Q9BWT7 1032 aa6□□□□□ -1.45
SDCBP-213ENST00000630925 FAM126AQ9BYI3 521 aaPredicted RBP6□□□□□ -1.45
SDCBP-213ENST00000630925 RBCK1Q9BYM8 510 aa6□□□□□ -1.45
SDCBP-213ENST00000630925 SRA1Q9HD15 236 aaKnown RBP6□□□□□ -1.45
SDCBP-213ENST00000630925 SNTG2Q9NY99 539 aa6□□□□□ -1.45
SDCBP-213ENST00000630925 TAGLN3Q9UI15 199 aa6□□□□□ -1.45
SDCBP-213ENST00000630925 SNAPC4Q5SXM2 1469 aa6□□□□□ -1.45
SDCBP-213ENST00000630925 PRSS47A8MTI9 375 aa6□□□□□ -1.45
SDCBP-213ENST00000630925 SNPHO15079 494 aa6□□□□□ -1.45
SDCBP-213ENST00000630925 SLC26A4O43511 780 aa6□□□□□ -1.45
SDCBP-213ENST00000630925 ST18O60284 1047 aa6□□□□□ -1.45
SDCBP-213ENST00000630925 LDHBP07195 334 aaKnown RBP6□□□□□ -1.45
SDCBP-213ENST00000630925 MYL3P08590 195 aa6□□□□□ -1.45
SDCBP-213ENST00000630925 POU3F3P20264 500 aaPredicted RBP6□□□□□ -1.45
SDCBP-213ENST00000630925 EPHB1P54762 984 aa6□□□□□ -1.45
SDCBP-213ENST00000630925 HLTFQ14527 1009 aaKnown RBP eCLIP6□□□□□ -1.45
SDCBP-213ENST00000630925 RASA3Q14644 834 aa6□□□□□ -1.45
SDCBP-213ENST00000630925 TTF1Q15361 905 aaPredicted RBP6□□□□□ -1.45
SDCBP-213ENST00000630925 CCDC92Q53HC0 331 aaPredicted RBP6□□□□□ -1.45
SDCBP-213ENST00000630925 C14orf80Q86SX3 495 aa6□□□□□ -1.45
SDCBP-213ENST00000630925 DEPDC4Q8N2C3 294 aa6□□□□□ -1.45
SDCBP-213ENST00000630925 DNAJC25Q9H1X3 360 aa6□□□□□ -1.45
SDCBP-213ENST00000630925 DNMT3AQ9Y6K1 912 aaPredicted RBP6□□□□□ -1.45
SDCBP-213ENST00000630925 RASA1P20936 1047 aa5.99□□□□□ -1.45
SDCBP-213ENST00000630925 MTMR3Q13615 1198 aa5.99□□□□□ -1.45
SDCBP-213ENST00000630925 Q3C1V9 767 aa5.99□□□□□ -1.45
SDCBP-213ENST00000630925 KIAA1958Q8N8K9 716 aa5.99□□□□□ -1.45
SDCBP-213ENST00000630925 SLAIN1Q8ND83 568 aa5.99□□□□□ -1.45
SDCBP-213ENST00000630925 CERKQ8TCT0 537 aa5.99□□□□□ -1.45
SDCBP-213ENST00000630925 GTF3C2Q8WUA4 911 aaPredicted RBP5.99□□□□□ -1.45
SDCBP-213ENST00000630925 CXXC1Q9P0U4 656 aaPredicted RBP5.99□□□□□ -1.45
SDCBP-213ENST00000630925 FAM221BA6H8Z2 402 aa5.98□□□□□ -1.45
SDCBP-213ENST00000630925 FMNL1O95466 1100 aaPredicted RBP5.98□□□□□ -1.45
SDCBP-213ENST00000630925 SCGB1D2O95969 90 aa5.98□□□□□ -1.45
SDCBP-213ENST00000630925 FOXK1P85037 733 aa5.98□□□□□ -1.45
SDCBP-213ENST00000630925 RPAINQ86UA6 219 aa5.98□□□□□ -1.45
SDCBP-213ENST00000630925 LGR6Q9HBX8 967 aa5.98□□□□□ -1.45
SDCBP-213ENST00000630925 SYNRGQ9UMZ2 1314 aa5.98□□□□□ -1.45
SDCBP-213ENST00000630925 ESYT3A0FGR9 886 aa5.98□□□□□ -1.45
SDCBP-213ENST00000630925 NUTM2BA6NNL0 878 aaPredicted RBP5.98□□□□□ -1.45
SDCBP-213ENST00000630925 NUTM2EB1AL46 878 aaPredicted RBP5.98□□□□□ -1.45
SDCBP-213ENST00000630925 MTA2O94776 668 aa5.98□□□□□ -1.45
SDCBP-213ENST00000630925 RAPGEF3O95398 923 aa5.98□□□□□ -1.45
SDCBP-213ENST00000630925 SLC4A3P48751 1232 aa5.98□□□□□ -1.45
SDCBP-213ENST00000630925 CHMP4BP1P59074 171 aa5.98□□□□□ -1.45
SDCBP-213ENST00000630925 MAP3K9P80192 1104 aa5.98□□□□□ -1.45
SDCBP-213ENST00000630925 GPSM2P81274 684 aa5.98□□□□□ -1.45
SDCBP-213ENST00000630925 FKBP4Q02790 459 aaKnown RBP eCLIP5.98□□□□□ -1.45
SDCBP-213ENST00000630925 PSMD2Q13200 908 aa5.98□□□□□ -1.45
SDCBP-213ENST00000630925 MORC3Q14149 939 aa5.98□□□□□ -1.45
SDCBP-213ENST00000630925 NUTM2DQ5VT03 806 aaPredicted RBP5.98□□□□□ -1.45
SDCBP-213ENST00000630925 CCDC70Q6NSX1 233 aa5.98□□□□□ -1.45
SDCBP-213ENST00000630925 LARP1Q6PKG0 1096 aaKnown RBP5.98□□□□□ -1.45
SDCBP-213ENST00000630925 NUTM2AQ8IVF1 878 aaPredicted RBP5.98□□□□□ -1.45
SDCBP-213ENST00000630925 SPICE1Q8N0Z3 855 aa5.98□□□□□ -1.45
SDCBP-213ENST00000630925 MPNDQ8N594 471 aa5.98□□□□□ -1.45
SDCBP-213ENST00000630925 PXYLP1Q8TE99 480 aa5.98□□□□□ -1.45
SDCBP-213ENST00000630925 APPBP2Q92624 585 aa5.98□□□□□ -1.45
SDCBP-213ENST00000630925 ACAD8Q9UKU7 415 aa5.98□□□□□ -1.45
SDCBP-213ENST00000630925 ATP8A1Q9Y2Q0 1164 aa5.98□□□□□ -1.45
SDCBP-213ENST00000630925 MAPKBP1O60336 1514 aa5.97□□□□□ -1.45
SDCBP-213ENST00000630925 SHTN1A0MZ66 631 aa5.97□□□□□ -1.45
SDCBP-213ENST00000630925 PRRT4C9JH25 899 aa5.97□□□□□ -1.45
SDCBP-213ENST00000630925 ITGAEP38570 1179 aa5.97□□□□□ -1.45
SDCBP-213ENST00000630925 CLK1P49759 484 aaKnown RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms