RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 SWAP70Q9UH65 585 aa15.11■□□□□ 0.01
SYNGAP1-208ENST00000629380 FBF1Q8TES7 1133 aa15.11■□□□□ 0.01
SYNGAP1-208ENST00000629380 AMOTL2Q9Y2J4 779 aa15.11■□□□□ 0.01
SYNGAP1-208ENST00000629380 WDR97A6NE52 1622 aa15.11■□□□□ 0.01
SYNGAP1-208ENST00000629380 RGS22Q8NE09 1264 aa15.11■□□□□ 0.01
SYNGAP1-208ENST00000629380 MYH10P35580 1976 aa15.11■□□□□ 0.01
SYNGAP1-208ENST00000629380 METTL24Q5JXM2 366 aa15.11■□□□□ 0.01
SYNGAP1-208ENST00000629380 FCHSD2O94868 740 aa15.1■□□□□ 0.01
SYNGAP1-208ENST00000629380 CAMK4Q16566 473 aa15.1■□□□□ 0.01
SYNGAP1-208ENST00000629380 KIAA0753Q2KHM9 967 aa15.1■□□□□ 0.01
SYNGAP1-208ENST00000629380 CCDC171Q6TFL3 1326 aa15.1■□□□□ 0.01
SYNGAP1-208ENST00000629380 GOLGA8BA8MQT2 603 aa15.1■□□□□ 0.01
SYNGAP1-208ENST00000629380 MTIF2P46199 727 aaKnown RBP15.1■□□□□ 0.01
SYNGAP1-208ENST00000629380 MXRA7P84157 204 aa15.1■□□□□ 0.01
SYNGAP1-208ENST00000629380 TMCO5BA8MYB1 307 aa15.1■□□□□ 0.01
SYNGAP1-208ENST00000629380 EXOC5O00471 708 aa15.1■□□□□ 0.01
SYNGAP1-208ENST00000629380 CCDC40Q4G0X9 1142 aa15.1■□□□□ 0.01
SYNGAP1-208ENST00000629380 KDM5BQ9UGL1 1544 aa15.1■□□□□ 0.01
SYNGAP1-208ENST00000629380 TBCAO75347 108 aaKnown RBP15.1■□□□□ 0.01
SYNGAP1-208ENST00000629380 PPP2R1AP30153 589 aa15.1■□□□□ 0.01
SYNGAP1-208ENST00000629380 SELENOOQ9BVL4 669 aa15.1■□□□□ 0.01
SYNGAP1-208ENST00000629380 JADE2Q9NQC1 790 aa15.1■□□□□ 0.01
SYNGAP1-208ENST00000629380 ADAMTS8Q9UP79 889 aa15.1■□□□□ 0.01
SYNGAP1-208ENST00000629380 DNAAF4Q8WXU2 420 aa15.1■□□□□ 0.01
SYNGAP1-208ENST00000629380 ZNF608Q9ULD9 1512 aaPredicted RBP15.1■□□□□ 0.01
SYNGAP1-208ENST00000629380 GMNNO75496 209 aa15.09■□□□□ 0.01
SYNGAP1-208ENST00000629380 TTF1Q15361 905 aaPredicted RBP15.09■□□□□ 0.01
SYNGAP1-208ENST00000629380 UBAP1LF5GYI3 381 aa15.09■□□□□ 0.01
SYNGAP1-208ENST00000629380 GLRX3O76003 335 aaKnown RBP15.09■□□□□ 0.01
SYNGAP1-208ENST00000629380 CTAGE1Q96RT6 745 aa15.09■□□□□ 0.01
SYNGAP1-208ENST00000629380 TTLL12Q14166 644 aaPredicted RBP15.09■□□□□ 0.01
SYNGAP1-208ENST00000629380 MAP4K4O95819 1239 aaPredicted RBP15.09■□□□□ 0.01
SYNGAP1-208ENST00000629380 PAXBP1Q9Y5B6 917 aa15.09■□□□□ 0.01
SYNGAP1-208ENST00000629380 UHRF1BP1LA0JNW5 1464 aa15.09■□□□□ 0.01
SYNGAP1-208ENST00000629380 IFIT1P09914 478 aaKnown RBP15.09■□□□□ 0.01
SYNGAP1-208ENST00000629380 PRPF4BQ13523 1007 aaKnown RBP15.09■□□□□ 0.01
SYNGAP1-208ENST00000629380 LRSAM1Q6UWE0 723 aa15.09■□□□□ 0.01
SYNGAP1-208ENST00000629380 EXOC1Q9NV70 894 aa15.09■□□□□ 0.01
SYNGAP1-208ENST00000629380 KIF1BPQ96EK5 621 aa15.09■□□□□ 0.01
SYNGAP1-208ENST00000629380 IBSPP21815 317 aaPredicted RBP15.09■□□□□ 0.01
SYNGAP1-208ENST00000629380 ALDH3A1P30838 453 aa15.09■□□□□ 0.01
SYNGAP1-208ENST00000629380 CCDC77Q9BR77 488 aa15.09■□□□□ 0.01
SYNGAP1-208ENST00000629380 ARL1P40616 181 aaPredicted RBP15.08■□□□□ 0.01
SYNGAP1-208ENST00000629380 CCDC6Q16204 474 aa15.08■□□□□ 0.01
SYNGAP1-208ENST00000629380 RPGRQ92834 1020 aaKnown RBP15.08■□□□□ 0.01
SYNGAP1-208ENST00000629380 DHX29Q7Z478 1369 aaKnown RBP15.08■□□□□ 0.01
SYNGAP1-208ENST00000629380 ADAMTS2O95450 1211 aa15.08■□□□□ 0.01
SYNGAP1-208ENST00000629380 SNX16P57768 344 aa15.08■□□□□ 0.01
SYNGAP1-208ENST00000629380 DDX19AQ9NUU7 478 aaKnown RBP15.08■□□□□ 0.01
SYNGAP1-208ENST00000629380 TTC21BQ7Z4L5 1316 aa15.08■□□□□ 0.01
SYNGAP1-208ENST00000629380 ATP2A2P16615 1042 aaKnown RBP15.08■□□□□ 0
SYNGAP1-208ENST00000629380 MSANTD4Q8NCY6 345 aa15.08■□□□□ 0
SYNGAP1-208ENST00000629380 CNGA1P29973 690 aa15.08■□□□□ 0
SYNGAP1-208ENST00000629380 NSD2O96028 1365 aa15.08■□□□□ 0
SYNGAP1-208ENST00000629380 MX1P20591 662 aa15.08■□□□□ 0
SYNGAP1-208ENST00000629380 ZC3H6P61129 1189 aaKnown RBP15.08■□□□□ 0
SYNGAP1-208ENST00000629380 BICD1Q96G01 975 aa15.08■□□□□ 0
SYNGAP1-208ENST00000629380 ABCC11Q96J66 1382 aa15.08■□□□□ 0
SYNGAP1-208ENST00000629380 FAM114A2Q9NRY5 505 aa15.08■□□□□ 0
SYNGAP1-208ENST00000629380 CFAP74Q9C0B2 1584 aa15.08■□□□□ 0
SYNGAP1-208ENST00000629380 CEP128Q6ZU80 1094 aa15.08■□□□□ 0
SYNGAP1-208ENST00000629380 SPTY2D1Q68D10 685 aaPredicted RBP15.07■□□□□ 0
SYNGAP1-208ENST00000629380 FMNL3Q8IVF7 1028 aa15.07■□□□□ 0
SYNGAP1-208ENST00000629380 PUF60Q9UHX1 559 aaKnown RBP15.07■□□□□ 0
SYNGAP1-208ENST00000629380 OTUD6BQ8N6M0 293 aa15.07■□□□□ 0
SYNGAP1-208ENST00000629380 CCDC110Q8TBZ0 833 aa15.07■□□□□ 0
SYNGAP1-208ENST00000629380 BMP15O95972 392 aa15.07■□□□□ 0
SYNGAP1-208ENST00000629380 CHMP4BP1P59074 171 aa15.07■□□□□ 0
SYNGAP1-208ENST00000629380 CNNM3Q8NE01 707 aa15.07■□□□□ 0
SYNGAP1-208ENST00000629380 NPHP3Q7Z494 1330 aa15.07■□□□□ 0
SYNGAP1-208ENST00000629380 APBB1IPQ7Z5R6 666 aaPredicted RBP15.07■□□□□ 0
SYNGAP1-208ENST00000629380 PDE4BQ07343 736 aa15.07■□□□□ 0
SYNGAP1-208ENST00000629380 NOP2P46087 812 aaKnown RBP15.06■□□□□ 0
SYNGAP1-208ENST00000629380 MNAT1P51948 309 aa15.06■□□□□ 0
SYNGAP1-208ENST00000629380 XPCQ01831 940 aaPredicted RBP15.06■□□□□ 0
SYNGAP1-208ENST00000629380 SLC12A5Q9H2X9 1139 aa15.06■□□□□ 0
SYNGAP1-208ENST00000629380 SPINK5Q9NQ38 1064 aaPredicted RBP15.06■□□□□ 0
SYNGAP1-208ENST00000629380 TNNT1P13805 278 aa15.06■□□□□ 0
SYNGAP1-208ENST00000629380 SNW1Q13573 536 aaKnown RBP15.06■□□□□ 0
SYNGAP1-208ENST00000629380 EXOSC9Q06265 439 aaKnown RBP15.05■□□□□ 0
SYNGAP1-208ENST00000629380 SMC1BQ8NDV3 1235 aa15.05■□□□□ 0
SYNGAP1-208ENST00000629380 NSD3Q9BZ95 1437 aa15.05■□□□□ 0
SYNGAP1-208ENST00000629380 PSMC4P43686 418 aa15.05■□□□□ 0
SYNGAP1-208ENST00000629380 MAP3K9P80192 1104 aa15.05■□□□□ 0
SYNGAP1-208ENST00000629380 GAS8O95995 478 aa15.05■□□□□ 0
SYNGAP1-208ENST00000629380 DNA2P51530 1060 aa15.05■□□□□ -0
SYNGAP1-208ENST00000629380 CFAP58Q5T655 872 aa15.05■□□□□ -0
SYNGAP1-208ENST00000629380 MCM4P33991 863 aa15.05■□□□□ -0
SYNGAP1-208ENST00000629380 PODXL2Q9NZ53 605 aa15.05■□□□□ -0
SYNGAP1-208ENST00000629380 EIF4G3O43432 1585 aaKnown RBP15.05■□□□□ -0
SYNGAP1-208ENST00000629380 KIF3CO14782 793 aa15.05■□□□□ -0
SYNGAP1-208ENST00000629380 IFIT5Q13325 482 aaKnown RBP15.05■□□□□ -0
SYNGAP1-208ENST00000629380 ADAMTS12P58397 1594 aa15.05■□□□□ -0
SYNGAP1-208ENST00000629380 B4DLN1 442 aa15.05■□□□□ -0
SYNGAP1-208ENST00000629380 MRPL12P52815 198 aaKnown RBP15.05■□□□□ -0
SYNGAP1-208ENST00000629380 OPA1O60313 960 aa15.05■□□□□ -0
SYNGAP1-208ENST00000629380 WASLO00401 505 aaPredicted RBP15.04■□□□□ -0
SYNGAP1-208ENST00000629380 URI1O94763 535 aaPredicted RBP15.04■□□□□ -0
SYNGAP1-208ENST00000629380 HLA-DOAP06340 250 aa15.04■□□□□ -0
SYNGAP1-208ENST00000629380 TRAF1Q13077 416 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms