RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 KAZALD1Q96I82 304 aa8.69□□□□□ -1.02
CTNNA1-244ENST00000627109 LAMA4Q16363 1823 aa8.69□□□□□ -1.02
CTNNA1-244ENST00000627109 TOGARAM1Q9Y4F4 1720 aa8.69□□□□□ -1.02
CTNNA1-244ENST00000627109 RFX7Q2KHR2 1363 aa8.69□□□□□ -1.02
CTNNA1-244ENST00000627109 KCPQ6ZWJ8 1503 aa8.69□□□□□ -1.02
CTNNA1-244ENST00000627109 PI4KAP2A4QPH2 592 aa8.69□□□□□ -1.02
CTNNA1-244ENST00000627109 ZNF530Q6P9A1 599 aaPredicted RBP8.69□□□□□ -1.02
CTNNA1-244ENST00000627109 PI4KAP1Q8N8J0 262 aa8.69□□□□□ -1.02
CTNNA1-244ENST00000627109 RILPL2Q969X0 211 aa8.69□□□□□ -1.02
CTNNA1-244ENST00000627109 HYPKQ9NX55 129 aa8.69□□□□□ -1.02
CTNNA1-244ENST00000627109 MCCP23508 829 aa8.68□□□□□ -1.02
CTNNA1-244ENST00000627109 FOXD4L6Q3SYB3 417 aaPredicted RBP8.68□□□□□ -1.02
CTNNA1-244ENST00000627109 FOXD4L3Q6VB84 417 aaPredicted RBP8.68□□□□□ -1.02
CTNNA1-244ENST00000627109 DDX49Q9Y6V7 483 aaKnown RBP8.68□□□□□ -1.02
CTNNA1-244ENST00000627109 WNK3Q9BYP7 1800 aa8.68□□□□□ -1.02
CTNNA1-244ENST00000627109 GPT2Q8TD30 523 aa8.68□□□□□ -1.02
CTNNA1-244ENST00000627109 DDX21Q9NR30 783 aaKnown RBP eCLIP8.68□□□□□ -1.02
CTNNA1-244ENST00000627109 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.68□□□□□ -1.02
CTNNA1-244ENST00000627109 TCHHQ07283 1943 aa8.68□□□□□ -1.02
CTNNA1-244ENST00000627109 PLCH1Q4KWH8 1693 aa8.68□□□□□ -1.02
CTNNA1-244ENST00000627109 DDB1Q16531 1140 aa8.68□□□□□ -1.02
CTNNA1-244ENST00000627109 PDLIM2Q96JY6 352 aa8.68□□□□□ -1.02
CTNNA1-244ENST00000627109 PSMD1Q99460 953 aa8.68□□□□□ -1.02
CTNNA1-244ENST00000627109 ALDH8A1Q9H2A2 487 aaPredicted RBP8.68□□□□□ -1.02
CTNNA1-244ENST00000627109 HDAC5Q9UQL6 1122 aa8.68□□□□□ -1.02
CTNNA1-244ENST00000627109 NHSL1Q5SYE7 1610 aa8.68□□□□□ -1.02
CTNNA1-244ENST00000627109 C1orf141Q5JVX7 400 aa8.67□□□□□ -1.02
CTNNA1-244ENST00000627109 TSHZ3Q63HK5 1081 aa8.67□□□□□ -1.02
CTNNA1-244ENST00000627109 LINS1Q8NG48 757 aa8.67□□□□□ -1.02
CTNNA1-244ENST00000627109 ACSBG1Q96GR2 724 aa8.67□□□□□ -1.02
CTNNA1-244ENST00000627109 TM6SF1Q9BZW5 370 aa8.67□□□□□ -1.02
CTNNA1-244ENST00000627109 EIF2S2P20042 333 aaKnown RBP8.67□□□□□ -1.02
CTNNA1-244ENST00000627109 ERC1Q8IUD2 1116 aa8.67□□□□□ -1.02
CTNNA1-244ENST00000627109 GJD4Q96KN9 370 aaPredicted RBP8.67□□□□□ -1.02
CTNNA1-244ENST00000627109 SRGAP3O43295 1099 aa8.67□□□□□ -1.02
CTNNA1-244ENST00000627109 POTEAQ6S8J7 498 aa8.67□□□□□ -1.02
CTNNA1-244ENST00000627109 SNX14Q9Y5W7 946 aa8.67□□□□□ -1.02
CTNNA1-244ENST00000627109 TNS2Q63HR2 1409 aa8.66□□□□□ -1.02
CTNNA1-244ENST00000627109 MED23Q9ULK4 1368 aa8.66□□□□□ -1.02
CTNNA1-244ENST00000627109 GLRX3O76003 335 aaKnown RBP8.66□□□□□ -1.02
CTNNA1-244ENST00000627109 PROSER3Q2NL68 480 aa8.66□□□□□ -1.02
CTNNA1-244ENST00000627109 ZSCAN23Q3MJ62 389 aa8.66□□□□□ -1.02
CTNNA1-244ENST00000627109 HS1BP3Q53T59 392 aa8.66□□□□□ -1.02
CTNNA1-244ENST00000627109 TICAM2Q86XR7 235 aa8.66□□□□□ -1.02
CTNNA1-244ENST00000627109 SEPT12Q8IYM1 358 aa8.66□□□□□ -1.02
CTNNA1-244ENST00000627109 CICQ96RK0 1608 aaPredicted RBP8.66□□□□□ -1.02
CTNNA1-244ENST00000627109 IL2RBP14784 551 aa8.66□□□□□ -1.02
CTNNA1-244ENST00000627109 NEK4P51957 841 aa8.66□□□□□ -1.02
CTNNA1-244ENST00000627109 CCDC173Q0VFZ6 552 aa8.66□□□□□ -1.02
CTNNA1-244ENST00000627109 TEFQ10587 303 aa8.66□□□□□ -1.02
CTNNA1-244ENST00000627109 MCTP1Q6DN14 999 aa8.66□□□□□ -1.02
CTNNA1-244ENST00000627109 CNTROBQ8N137 903 aa8.66□□□□□ -1.02
CTNNA1-244ENST00000627109 ANKRD36CQ5JPF3 1778 aa8.66□□□□□ -1.02
CTNNA1-244ENST00000627109 SURF6O75683 361 aaKnown RBP8.66□□□□□ -1.02
CTNNA1-244ENST00000627109 OS9Q13438 667 aaPredicted RBP8.66□□□□□ -1.02
CTNNA1-244ENST00000627109 MPRIPQ6WCQ1 1025 aa8.66□□□□□ -1.02
CTNNA1-244ENST00000627109 SLC52A2Q9HAB3 445 aa8.66□□□□□ -1.02
CTNNA1-244ENST00000627109 MAP3K2Q9Y2U5 619 aa8.66□□□□□ -1.02
CTNNA1-244ENST00000627109 IGKV5-2P06315 115 aa8.65□□□□□ -1.02
CTNNA1-244ENST00000627109 PHKG2P15735 406 aa8.65□□□□□ -1.02
CTNNA1-244ENST00000627109 RBM6P78332 1123 aaKnown RBP8.65□□□□□ -1.02
CTNNA1-244ENST00000627109 RABL6Q3YEC7 729 aaPredicted RBP8.65□□□□□ -1.02
CTNNA1-244ENST00000627109 LRP6O75581 1613 aa8.65□□□□□ -1.02
CTNNA1-244ENST00000627109 WDR17Q8IZU2 1322 aa8.65□□□□□ -1.03
CTNNA1-244ENST00000627109 NECTIN1Q15223 517 aa8.65□□□□□ -1.03
CTNNA1-244ENST00000627109 TSGA10IPQ3SY00 556 aa8.65□□□□□ -1.03
CTNNA1-244ENST00000627109 NUTM1Q86Y26 1132 aa8.65□□□□□ -1.03
CTNNA1-244ENST00000627109 ZCRB1Q8TBF4 217 aaKnown RBP8.65□□□□□ -1.03
CTNNA1-244ENST00000627109 ERBB4Q15303 1308 aa8.64□□□□□ -1.03
CTNNA1-244ENST00000627109 GRM8O00222 908 aa8.64□□□□□ -1.03
CTNNA1-244ENST00000627109 ECM2O94769 699 aaPredicted RBP8.64□□□□□ -1.03
CTNNA1-244ENST00000627109 SASH1O94885 1247 aa8.64□□□□□ -1.03
CTNNA1-244ENST00000627109 IL1RAPL2Q9NP60 686 aa8.64□□□□□ -1.03
CTNNA1-244ENST00000627109 ANO2Q9NQ90 1003 aa8.64□□□□□ -1.03
CTNNA1-244ENST00000627109 MBD3O95983 291 aa8.64□□□□□ -1.03
CTNNA1-244ENST00000627109 RFX5P48382 616 aaPredicted RBP8.64□□□□□ -1.03
CTNNA1-244ENST00000627109 ZNF790Q6PG37 636 aa8.64□□□□□ -1.03
CTNNA1-244ENST00000627109 ZSWIM6Q9HCJ5 1215 aa8.64□□□□□ -1.03
CTNNA1-244ENST00000627109 ECHDC1Q9NTX5 307 aa8.64□□□□□ -1.03
CTNNA1-244ENST00000627109 PHLPP1O60346 1717 aa8.64□□□□□ -1.03
CTNNA1-244ENST00000627109 ARAP2Q8WZ64 1704 aa8.64□□□□□ -1.03
CTNNA1-244ENST00000627109 CASP7P55210 303 aa8.64□□□□□ -1.03
CTNNA1-244ENST00000627109 EVI5LQ96CN4 794 aa8.64□□□□□ -1.03
CTNNA1-244ENST00000627109 SPG7Q9UQ90 795 aa8.64□□□□□ -1.03
CTNNA1-244ENST00000627109 VPS53Q5VIR6 699 aa8.63□□□□□ -1.03
CTNNA1-244ENST00000627109 LRSAM1Q6UWE0 723 aa8.63□□□□□ -1.03
CTNNA1-244ENST00000627109 FNBP4Q8N3X1 1017 aaPredicted RBP8.63□□□□□ -1.03
CTNNA1-244ENST00000627109 SUCLG2Q96I99 432 aa8.63□□□□□ -1.03
CTNNA1-244ENST00000627109 PRAMEF22A3QJZ6 481 aa8.63□□□□□ -1.03
CTNNA1-244ENST00000627109 RASEFQ8IZ41 740 aa8.63□□□□□ -1.03
CTNNA1-244ENST00000627109 CARD10Q9BWT7 1032 aa8.63□□□□□ -1.03
CTNNA1-244ENST00000627109 TMEM63CQ9P1W3 806 aa8.63□□□□□ -1.03
CTNNA1-244ENST00000627109 RREB1Q92766 1687 aa8.63□□□□□ -1.03
CTNNA1-244ENST00000627109 NEURL1BA8MQ27 555 aa8.63□□□□□ -1.03
CTNNA1-244ENST00000627109 SF3B2Q13435 895 aaKnown RBP8.63□□□□□ -1.03
CTNNA1-244ENST00000627109 USPL1Q5W0Q7 1092 aa8.63□□□□□ -1.03
CTNNA1-244ENST00000627109 RUFY3Q7L099 469 aa8.63□□□□□ -1.03
CTNNA1-244ENST00000627109 METTL22Q9BUU2 404 aaPredicted RBP8.63□□□□□ -1.03
CTNNA1-244ENST00000627109 COPRSQ9NQ92 184 aa8.63□□□□□ -1.03
CTNNA1-244ENST00000627109 ZNF330Q9Y3S2 320 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms