RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 SRGAP3O43295 1099 aa17.7■□□□□ 0.42
CLTCL1-212ENST00000622493 PCCAP05165 728 aaPredicted RBP17.7■□□□□ 0.42
CLTCL1-212ENST00000622493 NUCB1Q02818 461 aa17.7■□□□□ 0.42
CLTCL1-212ENST00000622493 NLRP10Q86W26 655 aa17.7■□□□□ 0.42
CLTCL1-212ENST00000622493 NARFQ9UHQ1 456 aa17.7■□□□□ 0.42
CLTCL1-212ENST00000622493 PDZRN3Q9UPQ7 1066 aa17.7■□□□□ 0.42
CLTCL1-212ENST00000622493 PARP10Q53GL7 1025 aa17.69■□□□□ 0.42
CLTCL1-212ENST00000622493 BICC1Q9H694 974 aaKnown RBP17.69■□□□□ 0.42
CLTCL1-212ENST00000622493 RABL6Q3YEC7 729 aaPredicted RBP17.69■□□□□ 0.42
CLTCL1-212ENST00000622493 TRAPPC3LQ5T215 181 aa17.69■□□□□ 0.42
CLTCL1-212ENST00000622493 ZPR1O75312 459 aa17.68■□□□□ 0.42
CLTCL1-212ENST00000622493 SCN7AQ01118 1682 aa17.68■□□□□ 0.42
CLTCL1-212ENST00000622493 CDHR2Q9BYE9 1310 aa17.67■□□□□ 0.42
CLTCL1-212ENST00000622493 GPTP24298 496 aa17.67■□□□□ 0.42
CLTCL1-212ENST00000622493 SSFA2P28290 1259 aa17.67■□□□□ 0.42
CLTCL1-212ENST00000622493 CHD1LQ86WJ1 897 aa17.67■□□□□ 0.42
CLTCL1-212ENST00000622493 ARHGEF1Q92888 912 aaKnown RBP17.67■□□□□ 0.42
CLTCL1-212ENST00000622493 HSP90AB4PQ58FF6 505 aa17.67■□□□□ 0.42
CLTCL1-212ENST00000622493 ANKRD45Q5TZF3 282 aa17.67■□□□□ 0.42
CLTCL1-212ENST00000622493 PLA2G12BQ9BX93 195 aa17.67■□□□□ 0.42
CLTCL1-212ENST00000622493 ZBTB47Q9UFB7 747 aaPredicted RBP17.67■□□□□ 0.42
CLTCL1-212ENST00000622493 UBR3Q6ZT12 1888 aa17.66■□□□□ 0.42
CLTCL1-212ENST00000622493 UBN2Q6ZU65 1347 aa17.66■□□□□ 0.42
CLTCL1-212ENST00000622493 RFC4P35249 363 aa17.66■□□□□ 0.42
CLTCL1-212ENST00000622493 FOXO4P98177 505 aa17.65■□□□□ 0.42
CLTCL1-212ENST00000622493 EPHA10Q5JZY3 1008 aa17.65■□□□□ 0.42
CLTCL1-212ENST00000622493 JARID2Q92833 1246 aaPredicted RBP17.65■□□□□ 0.42
CLTCL1-212ENST00000622493 TRMT112Q9UI30 125 aaKnown RBP17.65■□□□□ 0.42
CLTCL1-212ENST00000622493 NIP7Q9Y221 180 aaKnown RBP eCLIP17.65■□□□□ 0.42
CLTCL1-212ENST00000622493 NOP58Q9Y2X3 529 aaKnown RBP17.65■□□□□ 0.42
CLTCL1-212ENST00000622493 USP42Q9H9J4 1324 aaKnown RBP17.65■□□□□ 0.42
CLTCL1-212ENST00000622493 RAB11FIP3O75154 756 aa17.64■□□□□ 0.41
CLTCL1-212ENST00000622493 HSP90B1P14625 803 aaKnown RBP17.64■□□□□ 0.41
CLTCL1-212ENST00000622493 USPL1Q5W0Q7 1092 aa17.64■□□□□ 0.41
CLTCL1-212ENST00000622493 FAM89AQ96GI7 184 aa17.64■□□□□ 0.41
CLTCL1-212ENST00000622493 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.64■□□□□ 0.41
CLTCL1-212ENST00000622493 AMIGO3Q86WK7 504 aa17.64■□□□□ 0.41
CLTCL1-212ENST00000622493 UTP14AQ9BVJ6 771 aaKnown RBP17.64■□□□□ 0.41
CLTCL1-212ENST00000622493 EXOC6BQ9Y2D4 811 aa17.64■□□□□ 0.41
CLTCL1-212ENST00000622493 C4AP0C0L4 1744 aa17.64■□□□□ 0.41
CLTCL1-212ENST00000622493 SURF6O75683 361 aaKnown RBP17.63■□□□□ 0.41
CLTCL1-212ENST00000622493 PHF14O94880 888 aa17.63■□□□□ 0.41
CLTCL1-212ENST00000622493 RGS3P49796 1198 aa17.63■□□□□ 0.41
CLTCL1-212ENST00000622493 SF3B2Q13435 895 aaKnown RBP17.63■□□□□ 0.41
CLTCL1-212ENST00000622493 RTL5Q5HYW3 569 aaPredicted RBP17.63■□□□□ 0.41
CLTCL1-212ENST00000622493 SUSD4Q5VX71 490 aa17.63■□□□□ 0.41
CLTCL1-212ENST00000622493 BCL2L12Q9HB09 334 aa17.63■□□□□ 0.41
CLTCL1-212ENST00000622493 SH3TC1Q8TE82 1336 aa17.62■□□□□ 0.41
CLTCL1-212ENST00000622493 LMBR1LQ6UX01 489 aa17.62■□□□□ 0.41
CLTCL1-212ENST00000622493 AKT1S1Q96B36 256 aa17.62■□□□□ 0.41
CLTCL1-212ENST00000622493 LRRCC1Q9C099 1032 aa17.62■□□□□ 0.41
CLTCL1-212ENST00000622493 LNPKQ9C0E8 428 aa17.62■□□□□ 0.41
CLTCL1-212ENST00000622493 IRS4O14654 1257 aaPredicted RBP17.61■□□□□ 0.41
CLTCL1-212ENST00000622493 SMIM5Q71RC9 77 aa17.61■□□□□ 0.41
CLTCL1-212ENST00000622493 SKAP1Q86WV1 359 aa17.61■□□□□ 0.41
CLTCL1-212ENST00000622493 FLAD1Q8NFF5 587 aa17.61■□□□□ 0.41
CLTCL1-212ENST00000622493 CAMKK2Q96RR4 588 aa17.61■□□□□ 0.41
CLTCL1-212ENST00000622493 SRP68Q9UHB9 627 aaKnown RBP17.61■□□□□ 0.41
CLTCL1-212ENST00000622493 CSF1RP07333 972 aa17.61■□□□□ 0.41
CLTCL1-212ENST00000622493 ERC1Q8IUD2 1116 aa17.61■□□□□ 0.41
CLTCL1-212ENST00000622493 SETDB2Q96T68 719 aa17.61■□□□□ 0.41
CLTCL1-212ENST00000622493 COPRSQ9NQ92 184 aa17.61■□□□□ 0.41
CLTCL1-212ENST00000622493 PDE8AO60658 829 aa17.6■□□□□ 0.41
CLTCL1-212ENST00000622493 NTSR2O95665 410 aa17.6■□□□□ 0.41
CLTCL1-212ENST00000622493 BAG6P46379 1132 aa17.6■□□□□ 0.41
CLTCL1-212ENST00000622493 TBC1D9BQ66K14 1250 aa17.6■□□□□ 0.41
CLTCL1-212ENST00000622493 CCDC125Q86Z20 511 aa17.6■□□□□ 0.41
CLTCL1-212ENST00000622493 KIF1BPQ96EK5 621 aa17.6■□□□□ 0.41
CLTCL1-212ENST00000622493 TFCP2L1Q9NZI6 479 aa17.6■□□□□ 0.41
CLTCL1-212ENST00000622493 PDE4AP27815 886 aa17.59■□□□□ 0.41
CLTCL1-212ENST00000622493 RFX5P48382 616 aaPredicted RBP17.59■□□□□ 0.41
CLTCL1-212ENST00000622493 NYXQ9GZU5 481 aa17.59■□□□□ 0.41
CLTCL1-212ENST00000622493 G3BP1Q13283 466 aaKnown RBP eCLIP17.58■□□□□ 0.41
CLTCL1-212ENST00000622493 MYH3P11055 1940 aa17.58■□□□□ 0.4
CLTCL1-212ENST00000622493 APBB1O00213 710 aa17.58■□□□□ 0.4
CLTCL1-212ENST00000622493 PTPN12Q05209 780 aaKnown RBP17.58■□□□□ 0.4
CLTCL1-212ENST00000622493 EN1Q05925 392 aaPredicted RBP17.58■□□□□ 0.4
CLTCL1-212ENST00000622493 ZNF827Q17R98 1081 aa17.58■□□□□ 0.4
CLTCL1-212ENST00000622493 SYNE4Q8N205 404 aa17.58■□□□□ 0.4
CLTCL1-212ENST00000622493 RHPN1Q8TCX5 695 aa17.58■□□□□ 0.4
CLTCL1-212ENST00000622493 CHMP3Q9Y3E7 222 aa17.58■□□□□ 0.4
CLTCL1-212ENST00000622493 COL24A1Q17RW2 1714 aa17.57■□□□□ 0.4
CLTCL1-212ENST00000622493 CTSWP56202 376 aa17.57■□□□□ 0.4
CLTCL1-212ENST00000622493 OS9Q13438 667 aaPredicted RBP17.57■□□□□ 0.4
CLTCL1-212ENST00000622493 EZH2Q15910 746 aaKnown RBP17.57■□□□□ 0.4
CLTCL1-212ENST00000622493 CCDC57Q2TAC2 916 aa17.57■□□□□ 0.4
CLTCL1-212ENST00000622493 TTLL11Q8NHH1 800 aa17.57■□□□□ 0.4
CLTCL1-212ENST00000622493 PA2G4Q9UQ80 394 aaKnown RBP17.57■□□□□ 0.4
CLTCL1-212ENST00000622493 GYS1P13807 737 aa17.56■□□□□ 0.4
CLTCL1-212ENST00000622493 TPTE2Q6XPS3 522 aa17.56■□□□□ 0.4
CLTCL1-212ENST00000622493 BICDL1Q6ZP65 573 aa17.56■□□□□ 0.4
CLTCL1-212ENST00000622493 FBXO3Q9UK99 471 aa17.56■□□□□ 0.4
CLTCL1-212ENST00000622493 LAMB2P55268 1798 aa17.56■□□□□ 0.4
CLTCL1-212ENST00000622493 FAM177BA6PVY3 158 aa17.55■□□□□ 0.4
CLTCL1-212ENST00000622493 CARMIL3Q8ND23 1372 aa17.55■□□□□ 0.4
CLTCL1-212ENST00000622493 SMARCA5O60264 1052 aaPredicted RBP17.55■□□□□ 0.4
CLTCL1-212ENST00000622493 IFIT5Q13325 482 aaKnown RBP17.55■□□□□ 0.4
CLTCL1-212ENST00000622493 SLC10A5Q5PT55 438 aa17.55■□□□□ 0.4
CLTCL1-212ENST00000622493 NBPF5PQ86XG9 351 aaPredicted RBP17.55■□□□□ 0.4
CLTCL1-212ENST00000622493 GTF2E1P29083 439 aaPredicted RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 219.2 ms