RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 TMEM88BA6NKF7 163 aa22.22■■□□□ 1.15
TARDBP-225ENST00000621715 PSMD1Q99460 953 aa22.22■■□□□ 1.15
TARDBP-225ENST00000621715 HOXA10P31260 410 aaPredicted RBP22.21■■□□□ 1.15
TARDBP-225ENST00000621715 FMR1Q06787 632 aaKnown RBP eCLIP22.21■■□□□ 1.15
TARDBP-225ENST00000621715 NFE2L2Q16236 605 aa22.21■■□□□ 1.15
TARDBP-225ENST00000621715 LRP10Q7Z4F1 713 aa22.21■■□□□ 1.15
TARDBP-225ENST00000621715 CLEC11AQ9Y240 323 aa22.21■■□□□ 1.15
TARDBP-225ENST00000621715 RIC1Q4ADV7 1423 aa22.21■■□□□ 1.15
TARDBP-225ENST00000621715 NTSR2O95665 410 aa22.2■■□□□ 1.14
TARDBP-225ENST00000621715 ZNF34Q8IZ26 560 aa22.2■■□□□ 1.14
TARDBP-225ENST00000621715 CNTROBQ8N137 903 aa22.2■■□□□ 1.14
TARDBP-225ENST00000621715 GPC2Q8N158 579 aa22.2■■□□□ 1.14
TARDBP-225ENST00000621715 NYXQ9GZU5 481 aa22.2■■□□□ 1.14
TARDBP-225ENST00000621715 TCERG1O14776 1098 aaKnown RBP22.19■■□□□ 1.14
TARDBP-225ENST00000621715 IBTKQ9P2D0 1353 aaPredicted RBP22.19■■□□□ 1.14
TARDBP-225ENST00000621715 SCNN1DP51172 638 aa22.18■■□□□ 1.14
TARDBP-225ENST00000621715 PDIA6Q15084 440 aa22.18■■□□□ 1.14
TARDBP-225ENST00000621715 PROSER3Q2NL68 480 aa22.18■■□□□ 1.14
TARDBP-225ENST00000621715 KIF6Q6ZMV9 814 aa22.18■■□□□ 1.14
TARDBP-225ENST00000621715 PNISRQ8TF01 805 aaKnown RBP22.18■■□□□ 1.14
TARDBP-225ENST00000621715 GJA3Q9Y6H8 435 aa22.18■■□□□ 1.14
TARDBP-225ENST00000621715 LAMB2P55268 1798 aa22.17■■□□□ 1.14
TARDBP-225ENST00000621715 ANXA1P04083 346 aa22.17■■□□□ 1.14
TARDBP-225ENST00000621715 EPS15P42566 896 aa22.17■■□□□ 1.14
TARDBP-225ENST00000621715 RPGRQ92834 1020 aaKnown RBP22.17■■□□□ 1.14
TARDBP-225ENST00000621715 RASSF10A6NK89 507 aa22.15■■□□□ 1.14
TARDBP-225ENST00000621715 PPEF1O14829 653 aaPredicted RBP22.15■■□□□ 1.14
TARDBP-225ENST00000621715 GIGYF2Q6Y7W6 1299 aaKnown RBP22.15■■□□□ 1.14
TARDBP-225ENST00000621715 PNMA8AQ86V59 439 aaPredicted RBP22.15■■□□□ 1.14
TARDBP-225ENST00000621715 JDP2Q8WYK2 163 aa22.15■■□□□ 1.14
TARDBP-225ENST00000621715 WBP1LQ9NX94 342 aa22.15■■□□□ 1.14
TARDBP-225ENST00000621715 TAF1P21675 1872 aa22.15■■□□□ 1.14
TARDBP-225ENST00000621715 CRAMP1Q96RY5 1269 aa22.14■■□□□ 1.13
TARDBP-225ENST00000621715 ANKRD36CQ5JPF3 1778 aa22.13■■□□□ 1.13
TARDBP-225ENST00000621715 CC2D2BQ6DHV5 1058 aa22.13■■□□□ 1.13
TARDBP-225ENST00000621715 LARGE2Q8N3Y3 721 aa22.13■■□□□ 1.13
TARDBP-225ENST00000621715 PRDM10Q9NQV6 1147 aa22.13■■□□□ 1.13
TARDBP-225ENST00000621715 TRAF5O00463 557 aa22.12■■□□□ 1.13
TARDBP-225ENST00000621715 LBX1P52954 281 aa22.12■■□□□ 1.13
TARDBP-225ENST00000621715 EIF6P56537 245 aaKnown RBP22.12■■□□□ 1.13
TARDBP-225ENST00000621715 RBM17Q96I25 401 aaKnown RBP22.12■■□□□ 1.13
TARDBP-225ENST00000621715 DDX21Q9NR30 783 aaKnown RBP eCLIP22.12■■□□□ 1.13
TARDBP-225ENST00000621715 THSD7BQ9C0I4 1608 aa22.11■■□□□ 1.13
TARDBP-225ENST00000621715 AOC3Q16853 763 aa22.11■■□□□ 1.13
TARDBP-225ENST00000621715 DEFB115Q30KQ5 88 aa22.11■■□□□ 1.13
TARDBP-225ENST00000621715 TSPYL4Q9UJ04 414 aa22.11■■□□□ 1.13
TARDBP-225ENST00000621715 TRPM7Q96QT4 1865 aa22.11■■□□□ 1.13
TARDBP-225ENST00000621715 ABCC4O15439 1325 aa22.1■■□□□ 1.13
TARDBP-225ENST00000621715 ERBB4Q15303 1308 aa22.1■■□□□ 1.13
TARDBP-225ENST00000621715 EIF2S2P20042 333 aaKnown RBP22.1■■□□□ 1.13
TARDBP-225ENST00000621715 CTCFP49711 727 aaPredicted RBP22.1■■□□□ 1.13
TARDBP-225ENST00000621715 CST9Q5W186 159 aa22.1■■□□□ 1.13
TARDBP-225ENST00000621715 WDR33Q9C0J8 1336 aaKnown RBP22.09■■□□□ 1.13
TARDBP-225ENST00000621715 NEFMP07197 916 aa22.09■■□□□ 1.13
TARDBP-225ENST00000621715 HSPA8P11142 646 aaKnown RBP22.09■■□□□ 1.13
TARDBP-225ENST00000621715 SLC10A5Q5PT55 438 aa22.09■■□□□ 1.13
TARDBP-225ENST00000621715 ZNF428Q96B54 188 aa22.09■■□□□ 1.13
TARDBP-225ENST00000621715 ABT1Q9ULW3 272 aaKnown RBP22.09■■□□□ 1.13
TARDBP-225ENST00000621715 COL4A1P02462 1669 aa22.08■■□□□ 1.13
TARDBP-225ENST00000621715 PPIP5K2O43314 1243 aa22.08■■□□□ 1.13
TARDBP-225ENST00000621715 KRT24Q2M2I5 525 aa22.08■■□□□ 1.13
TARDBP-225ENST00000621715 NECTIN2Q92692 538 aa22.08■■□□□ 1.13
TARDBP-225ENST00000621715 ATP6V0A2Q9Y487 856 aa22.08■■□□□ 1.13
TARDBP-225ENST00000621715 MAPK8IP3Q9UPT6 1336 aa22.07■■□□□ 1.12
TARDBP-225ENST00000621715 PARP10Q53GL7 1025 aa22.07■■□□□ 1.12
TARDBP-225ENST00000621715 PPP1R42Q7Z4L9 355 aa22.07■■□□□ 1.12
TARDBP-225ENST00000621715 AIDAQ96BJ3 306 aa22.07■■□□□ 1.12
TARDBP-225ENST00000621715 UTP14AQ9BVJ6 771 aaKnown RBP22.07■■□□□ 1.12
TARDBP-225ENST00000621715 DUOX1Q9NRD9 1551 aa22.07■■□□□ 1.12
TARDBP-225ENST00000621715 HCLS1P14317 486 aaPredicted RBP22.06■■□□□ 1.12
TARDBP-225ENST00000621715 LMOD1P29536 600 aaPredicted RBP22.06■■□□□ 1.12
TARDBP-225ENST00000621715 RIPK4P57078 832 aa22.06■■□□□ 1.12
TARDBP-225ENST00000621715 CXCL9Q07325 125 aa22.06■■□□□ 1.12
TARDBP-225ENST00000621715 NIM1KQ8IY84 436 aa22.06■■□□□ 1.12
TARDBP-225ENST00000621715 NLRP3Q96P20 1036 aa22.06■■□□□ 1.12
TARDBP-225ENST00000621715 CYP4F22Q6NT55 531 aa22.05■■□□□ 1.12
TARDBP-225ENST00000621715 COPS6Q7L5N1 327 aa22.05■■□□□ 1.12
TARDBP-225ENST00000621715 RTFDC1Q9BY42 306 aaPredicted RBP22.05■■□□□ 1.12
TARDBP-225ENST00000621715 GPRC5DQ9NZD1 345 aa22.05■■□□□ 1.12
TARDBP-225ENST00000621715 DDX60Q8IY21 1712 aaKnown RBP22.04■■□□□ 1.12
TARDBP-225ENST00000621715 SHTN1A0MZ66 631 aa22.04■■□□□ 1.12
TARDBP-225ENST00000621715 TMPOP42166 694 aaKnown RBP22.04■■□□□ 1.12
TARDBP-225ENST00000621715 AIMP1Q12904 312 aaKnown RBP22.04■■□□□ 1.12
TARDBP-225ENST00000621715 GRIPAP1Q4V328 841 aa22.04■■□□□ 1.12
TARDBP-225ENST00000621715 USP50Q70EL3 339 aaPredicted RBP22.04■■□□□ 1.12
TARDBP-225ENST00000621715 NLRP10Q86W26 655 aa22.04■■□□□ 1.12
TARDBP-225ENST00000621715 XAGE3Q8WTP9 111 aa22.04■■□□□ 1.12
TARDBP-225ENST00000621715 CAPNS2Q96L46 248 aa22.03■■□□□ 1.12
TARDBP-225ENST00000621715 GMPSP49915 693 aaPredicted RBP22.02■■□□□ 1.12
TARDBP-225ENST00000621715 ZNRF3Q9ULT6 936 aa22.02■■□□□ 1.12
TARDBP-225ENST00000621715 LRRC37AA6NMS7 1700 aa22.02■■□□□ 1.12
TARDBP-225ENST00000621715 YDJCA8MPS7 323 aa22.01■■□□□ 1.11
TARDBP-225ENST00000621715 HIRAP54198 1017 aaPredicted RBP22.01■■□□□ 1.11
TARDBP-225ENST00000621715 GRM1Q13255 1194 aa22.01■■□□□ 1.11
TARDBP-225ENST00000621715 AOC2O75106 756 aa22■■□□□ 1.11
TARDBP-225ENST00000621715 SP8Q8IXZ3 490 aa22■■□□□ 1.11
TARDBP-225ENST00000621715 CCDC146Q8IYE0 955 aa22■■□□□ 1.11
TARDBP-225ENST00000621715 GLIS2Q9BZE0 524 aaPredicted RBP22■■□□□ 1.11
TARDBP-225ENST00000621715 ADARB2Q9NS39 739 aaKnown RBP22■■□□□ 1.11
TARDBP-225ENST00000621715 TLL2Q9Y6L7 1015 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms