RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 PHAXQ9H814 394 aaKnown RBP19.94■□□□□ 0.78
SRGAP2C-205ENST00000617209 ADCY9O60503 1353 aa19.94■□□□□ 0.78
SRGAP2C-205ENST00000617209 SLX4Q8IY92 1834 aa19.93■□□□□ 0.78
SRGAP2C-205ENST00000617209 DIEXFQ68CQ4 756 aaKnown RBP19.93■□□□□ 0.78
SRGAP2C-205ENST00000617209 ISCA1Q9BUE6 129 aa19.93■□□□□ 0.78
SRGAP2C-205ENST00000617209 SPINK5Q9NQ38 1064 aaPredicted RBP19.93■□□□□ 0.78
SRGAP2C-205ENST00000617209 VAMP4O75379 141 aa19.92■□□□□ 0.78
SRGAP2C-205ENST00000617209 ALDH1B1P30837 517 aa19.92■□□□□ 0.78
SRGAP2C-205ENST00000617209 STK31Q9BXU1 1019 aa19.92■□□□□ 0.78
SRGAP2C-205ENST00000617209 HOXA10P31260 410 aaPredicted RBP19.91■□□□□ 0.78
SRGAP2C-205ENST00000617209 RIC3Q7Z5B4 369 aa19.91■□□□□ 0.78
SRGAP2C-205ENST00000617209 ABCC12Q96J65 1359 aa19.91■□□□□ 0.78
SRGAP2C-205ENST00000617209 DDX58O95786 925 aaKnown RBP19.9■□□□□ 0.78
SRGAP2C-205ENST00000617209 EXOSC9Q06265 439 aaKnown RBP19.9■□□□□ 0.78
SRGAP2C-205ENST00000617209 PRPF40BQ6NWY9 871 aaKnown RBP19.9■□□□□ 0.78
SRGAP2C-205ENST00000617209 C7orf43Q8WVR3 580 aa19.9■□□□□ 0.78
SRGAP2C-205ENST00000617209 NLRP3Q96P20 1036 aa19.9■□□□□ 0.78
SRGAP2C-205ENST00000617209 TNRC6CQ9HCJ0 1690 aaKnown RBP19.9■□□□□ 0.78
SRGAP2C-205ENST00000617209 CACNA1SQ13698 1873 aa19.9■□□□□ 0.78
SRGAP2C-205ENST00000617209 FER1L6Q2WGJ9 1857 aa19.9■□□□□ 0.78
SRGAP2C-205ENST00000617209 SOGA3Q5TF21 947 aa19.89■□□□□ 0.77
SRGAP2C-205ENST00000617209 TRMT112Q9UI30 125 aaKnown RBP19.89■□□□□ 0.77
SRGAP2C-205ENST00000617209 SH3TC1Q8TE82 1336 aa19.88■□□□□ 0.77
SRGAP2C-205ENST00000617209 C21orf2O43822 256 aa19.88■□□□□ 0.77
SRGAP2C-205ENST00000617209 SLC4A2P04920 1241 aa19.88■□□□□ 0.77
SRGAP2C-205ENST00000617209 CCDC88AQ3V6T2 1871 aa19.88■□□□□ 0.77
SRGAP2C-205ENST00000617209 C9orf131Q5VYM1 1079 aa19.87■□□□□ 0.77
SRGAP2C-205ENST00000617209 KSR2Q6VAB6 950 aa19.87■□□□□ 0.77
SRGAP2C-205ENST00000617209 CRAMP1Q96RY5 1269 aa19.87■□□□□ 0.77
SRGAP2C-205ENST00000617209 LTBP3Q9NS15 1303 aa19.86■□□□□ 0.77
SRGAP2C-205ENST00000617209 ATP5J2-PTCD1G3V325 749 aa19.86■□□□□ 0.77
SRGAP2C-205ENST00000617209 NFKBIEO00221 500 aa19.86■□□□□ 0.77
SRGAP2C-205ENST00000617209 LMNB1P20700 586 aa19.86■□□□□ 0.77
SRGAP2C-205ENST00000617209 MIER1Q8N108 512 aa19.86■□□□□ 0.77
SRGAP2C-205ENST00000617209 RPGRQ92834 1020 aaKnown RBP19.86■□□□□ 0.77
SRGAP2C-205ENST00000617209 METTL22Q9BUU2 404 aaPredicted RBP19.86■□□□□ 0.77
SRGAP2C-205ENST00000617209 E9PSI1 815 aa19.85■□□□□ 0.77
SRGAP2C-205ENST00000617209 CCDC191Q8NCU4 936 aa19.85■□□□□ 0.77
SRGAP2C-205ENST00000617209 PI4KAP2A4QPH2 592 aa19.84■□□□□ 0.77
SRGAP2C-205ENST00000617209 TCERG1O14776 1098 aaKnown RBP19.84■□□□□ 0.77
SRGAP2C-205ENST00000617209 PI4KAP1Q8N8J0 262 aa19.84■□□□□ 0.77
SRGAP2C-205ENST00000617209 RBM17Q96I25 401 aaKnown RBP19.84■□□□□ 0.77
SRGAP2C-205ENST00000617209 LAMB2P55268 1798 aa19.84■□□□□ 0.77
SRGAP2C-205ENST00000617209 ZC3H4Q9UPT8 1303 aaKnown RBP19.83■□□□□ 0.77
SRGAP2C-205ENST00000617209 DICER1Q9UPY3 1922 aaKnown RBP19.83■□□□□ 0.77
SRGAP2C-205ENST00000617209 SLFN5Q08AF3 891 aa19.83■□□□□ 0.77
SRGAP2C-205ENST00000617209 CC2D2BQ6DHV5 1058 aa19.83■□□□□ 0.77
SRGAP2C-205ENST00000617209 C3orf67Q6ZVT6 689 aa19.83■□□□□ 0.77
SRGAP2C-205ENST00000617209 G2E3Q7L622 706 aa19.83■□□□□ 0.77
SRGAP2C-205ENST00000617209 SYNE4Q8N205 404 aa19.83■□□□□ 0.77
SRGAP2C-205ENST00000617209 RNF181Q9P0P0 153 aa19.83■□□□□ 0.77
SRGAP2C-205ENST00000617209 ZNF219Q9P2Y4 722 aaPredicted RBP19.83■□□□□ 0.77
SRGAP2C-205ENST00000617209 MAP3K2Q9Y2U5 619 aa19.83■□□□□ 0.77
SRGAP2C-205ENST00000617209 HCLS1P14317 486 aaPredicted RBP19.82■□□□□ 0.76
SRGAP2C-205ENST00000617209 PRELPP51888 382 aa19.82■□□□□ 0.76
SRGAP2C-205ENST00000617209 RASSF7Q02833 373 aa19.82■□□□□ 0.76
SRGAP2C-205ENST00000617209 FLIIQ13045 1269 aa19.82■□□□□ 0.76
SRGAP2C-205ENST00000617209 GRIPAP1Q4V328 841 aa19.82■□□□□ 0.76
SRGAP2C-205ENST00000617209 CCDC93Q567U6 631 aa19.82■□□□□ 0.76
SRGAP2C-205ENST00000617209 ZBTB38Q8NAP3 1195 aaPredicted RBP19.82■□□□□ 0.76
SRGAP2C-205ENST00000617209 FAM89AQ96GI7 184 aa19.82■□□□□ 0.76
SRGAP2C-205ENST00000617209 MYD88Q99836 296 aa19.82■□□□□ 0.76
SRGAP2C-205ENST00000617209 DDX60Q8IY21 1712 aaKnown RBP19.82■□□□□ 0.76
SRGAP2C-205ENST00000617209 HSP90B1P14625 803 aaKnown RBP19.81■□□□□ 0.76
SRGAP2C-205ENST00000617209 TRMT2AQ8IZ69 625 aaKnown RBP19.81■□□□□ 0.76
SRGAP2C-205ENST00000617209 RTKN2Q8IZC4 609 aa19.81■□□□□ 0.76
SRGAP2C-205ENST00000617209 TAOK3Q9H2K8 898 aa19.81■□□□□ 0.76
SRGAP2C-205ENST00000617209 GPBP1L1Q9HC44 474 aaPredicted RBP19.81■□□□□ 0.76
SRGAP2C-205ENST00000617209 PCCAP05165 728 aaPredicted RBP19.8■□□□□ 0.76
SRGAP2C-205ENST00000617209 NEXNQ0ZGT2 675 aa19.8■□□□□ 0.76
SRGAP2C-205ENST00000617209 SF3B3Q15393 1217 aaKnown RBP19.8■□□□□ 0.76
SRGAP2C-205ENST00000617209 CWC25Q9NXE8 425 aaPredicted RBP19.8■□□□□ 0.76
SRGAP2C-205ENST00000617209 BBOX1O75936 387 aa19.79■□□□□ 0.76
SRGAP2C-205ENST00000617209 IGKV5-2P06315 115 aa19.79■□□□□ 0.76
SRGAP2C-205ENST00000617209 SNED1Q8TER0 1413 aa19.78■□□□□ 0.76
SRGAP2C-205ENST00000617209 ZNF428Q96B54 188 aa19.78■□□□□ 0.76
SRGAP2C-205ENST00000617209 IRS4O14654 1257 aaPredicted RBP19.77■□□□□ 0.76
SRGAP2C-205ENST00000617209 FKBP4Q02790 459 aaKnown RBP eCLIP19.77■□□□□ 0.76
SRGAP2C-205ENST00000617209 FKBP5Q13451 457 aaPredicted RBP19.77■□□□□ 0.76
SRGAP2C-205ENST00000617209 DDX46Q7L014 1031 aaKnown RBP19.77■□□□□ 0.76
SRGAP2C-205ENST00000617209 PSMD1Q99460 953 aa19.77■□□□□ 0.76
SRGAP2C-205ENST00000617209 ABCC4O15439 1325 aa19.76■□□□□ 0.75
SRGAP2C-205ENST00000617209 PPEF1O14829 653 aaPredicted RBP19.76■□□□□ 0.75
SRGAP2C-205ENST00000617209 OLFM4Q6UX06 510 aa19.76■□□□□ 0.75
SRGAP2C-205ENST00000617209 DNAAF4Q8WXU2 420 aa19.76■□□□□ 0.75
SRGAP2C-205ENST00000617209 CDCA7LQ96GN5 454 aa19.76■□□□□ 0.75
SRGAP2C-205ENST00000617209 ATP6V0A2Q9Y487 856 aa19.76■□□□□ 0.75
SRGAP2C-205ENST00000617209 NEURL1BA8MQ27 555 aa19.75■□□□□ 0.75
SRGAP2C-205ENST00000617209 RTL5Q5HYW3 569 aaPredicted RBP19.75■□□□□ 0.75
SRGAP2C-205ENST00000617209 TMC4Q7Z404 712 aa19.75■□□□□ 0.75
SRGAP2C-205ENST00000617209 SP8Q8IXZ3 490 aa19.75■□□□□ 0.75
SRGAP2C-205ENST00000617209 LINS1Q8NG48 757 aa19.75■□□□□ 0.75
SRGAP2C-205ENST00000617209 ZNF526Q8TF50 670 aaPredicted RBP19.75■□□□□ 0.75
SRGAP2C-205ENST00000617209 TAF1P21675 1872 aa19.75■□□□□ 0.75
SRGAP2C-205ENST00000617209 KDM2BQ8NHM5 1336 aa19.75■□□□□ 0.75
SRGAP2C-205ENST00000617209 CDHR2Q9BYE9 1310 aa19.75■□□□□ 0.75
SRGAP2C-205ENST00000617209 PDE8AO60658 829 aa19.74■□□□□ 0.75
SRGAP2C-205ENST00000617209 GRAPQ13588 217 aa19.74■□□□□ 0.75
SRGAP2C-205ENST00000617209 GRAPLQ8TC17 118 aaPredicted RBP19.74■□□□□ 0.75
SRGAP2C-205ENST00000617209 TMX4Q9H1E5 349 aaPredicted RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms