RNA–Protein interactions for RNA: ENST00000617161.1

CA9-204, Transcript of carbonic anhydrase 9, humanhuman

TSL 1 (best) BASIC

Gene CA9, Length 1,374 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CA9-204ENST00000617161 EXOSC9Q06265 439 aaKnown RBP29.33■■■□□ 2.29
CA9-204ENST00000617161 PRPF40BQ6NWY9 871 aaKnown RBP29.33■■■□□ 2.29
CA9-204ENST00000617161 C3orf67Q6ZVT6 689 aa29.33■■■□□ 2.29
CA9-204ENST00000617161 CNKSR1Q969H4 720 aa29.33■■■□□ 2.29
CA9-204ENST00000617161 UTP14AQ9BVJ6 771 aaKnown RBP29.33■■■□□ 2.29
CA9-204ENST00000617161 C21orf2O43822 256 aa29.32■■■□□ 2.28
CA9-204ENST00000617161 PRELPP51888 382 aa29.32■■■□□ 2.28
CA9-204ENST00000617161 RASSF7Q02833 373 aa29.32■■■□□ 2.28
CA9-204ENST00000617161 FER1L6Q2WGJ9 1857 aa29.32■■■□□ 2.28
CA9-204ENST00000617161 SYNE4Q8N205 404 aa29.32■■■□□ 2.28
CA9-204ENST00000617161 ZNF428Q96B54 188 aa29.32■■■□□ 2.28
CA9-204ENST00000617161 ISCA1Q9BUE6 129 aa29.32■■■□□ 2.28
CA9-204ENST00000617161 ZNF219Q9P2Y4 722 aaPredicted RBP29.31■■■□□ 2.28
CA9-204ENST00000617161 NFKBIEO00221 500 aa29.3■■■□□ 2.28
CA9-204ENST00000617161 VAMP4O75379 141 aa29.3■■■□□ 2.28
CA9-204ENST00000617161 GOLGA2Q08379 1002 aa29.3■■■□□ 2.28
CA9-204ENST00000617161 LAMB2P55268 1798 aa29.3■■■□□ 2.28
CA9-204ENST00000617161 ATP5J2-PTCD1G3V325 749 aa29.29■■■□□ 2.28
CA9-204ENST00000617161 SLC10A5Q5PT55 438 aa29.29■■■□□ 2.28
CA9-204ENST00000617161 MIER1Q8N108 512 aa29.29■■■□□ 2.28
CA9-204ENST00000617161 C7orf43Q8WVR3 580 aa29.29■■■□□ 2.28
CA9-204ENST00000617161 CHMP4AQ9BY43 222 aa29.29■■■□□ 2.28
CA9-204ENST00000617161 C9orf131Q5VYM1 1079 aa29.28■■■□□ 2.28
CA9-204ENST00000617161 CCDC88AQ3V6T2 1871 aa29.28■■■□□ 2.28
CA9-204ENST00000617161 RNF123Q5XPI4 1314 aa29.28■■■□□ 2.28
CA9-204ENST00000617161 G2E3Q7L622 706 aa29.27■■■□□ 2.28
CA9-204ENST00000617161 RIC3Q7Z5B4 369 aa29.27■■■□□ 2.28
CA9-204ENST00000617161 MYH16Q9H6N6 1097 aa29.27■■■□□ 2.28
CA9-204ENST00000617161 DDX60Q8IY21 1712 aaKnown RBP29.27■■■□□ 2.28
CA9-204ENST00000617161 TRMT112Q9UI30 125 aaKnown RBP29.26■■■□□ 2.28
CA9-204ENST00000617161 SLC4A2P04920 1241 aa29.26■■■□□ 2.27
CA9-204ENST00000617161 STK31Q9BXU1 1019 aa29.26■■■□□ 2.27
CA9-204ENST00000617161 CACNA1FO60840 1977 aa29.25■■■□□ 2.27
CA9-204ENST00000617161 HOXA10P31260 410 aaPredicted RBP29.25■■■□□ 2.27
CA9-204ENST00000617161 TRIM28Q13263 835 aaKnown RBP29.25■■■□□ 2.27
CA9-204ENST00000617161 OLFM4Q6UX06 510 aa29.25■■■□□ 2.27
CA9-204ENST00000617161 SH3TC1Q8TE82 1336 aa29.24■■■□□ 2.27
CA9-204ENST00000617161 HCLS1P14317 486 aaPredicted RBP29.24■■■□□ 2.27
CA9-204ENST00000617161 RNF181Q9P0P0 153 aa29.24■■■□□ 2.27
CA9-204ENST00000617161 MYD88Q99836 296 aa29.23■■■□□ 2.27
CA9-204ENST00000617161 ALDH1B1P30837 517 aa29.22■■■□□ 2.27
CA9-204ENST00000617161 SLC51AQ86UW1 340 aa29.22■■■□□ 2.27
CA9-204ENST00000617161 ZNF526Q8TF50 670 aaPredicted RBP29.22■■■□□ 2.27
CA9-204ENST00000617161 FAM89AQ96GI7 184 aa29.22■■■□□ 2.27
CA9-204ENST00000617161 NLRP3Q96P20 1036 aa29.22■■■□□ 2.27
CA9-204ENST00000617161 METTL22Q9BUU2 404 aaPredicted RBP29.22■■■□□ 2.27
CA9-204ENST00000617161 MAP3K2Q9Y2U5 619 aa29.22■■■□□ 2.27
CA9-204ENST00000617161 SNED1Q8TER0 1413 aa29.21■■■□□ 2.27
CA9-204ENST00000617161 PI4KAP2A4QPH2 592 aa29.21■■■□□ 2.27
CA9-204ENST00000617161 KSR2Q6VAB6 950 aa29.21■■■□□ 2.27
CA9-204ENST00000617161 PI4KAP1Q8N8J0 262 aa29.21■■■□□ 2.27
CA9-204ENST00000617161 RPGRQ92834 1020 aaKnown RBP29.21■■■□□ 2.27
CA9-204ENST00000617161 DDX58O95786 925 aaKnown RBP29.2■■■□□ 2.26
CA9-204ENST00000617161 LMNB1P20700 586 aa29.2■■■□□ 2.26
CA9-204ENST00000617161 LTBP3Q9NS15 1303 aa29.19■■■□□ 2.26
CA9-204ENST00000617161 DICER1Q9UPY3 1922 aaKnown RBP29.19■■■□□ 2.26
CA9-204ENST00000617161 TIAM2Q8IVF5 1701 aa29.18■■■□□ 2.26
CA9-204ENST00000617161 TAF1P21675 1872 aa29.18■■■□□ 2.26
CA9-204ENST00000617161 FLIIQ13045 1269 aa29.18■■■□□ 2.26
CA9-204ENST00000617161 RTL5Q5HYW3 569 aaPredicted RBP29.18■■■□□ 2.26
CA9-204ENST00000617161 CRAMP1Q96RY5 1269 aa29.18■■■□□ 2.26
CA9-204ENST00000617161 IGKV5-2P06315 115 aa29.17■■■□□ 2.26
CA9-204ENST00000617161 SOGA3Q5TF21 947 aa29.17■■■□□ 2.26
CA9-204ENST00000617161 CDCA7LQ96GN5 454 aa29.17■■■□□ 2.26
CA9-204ENST00000617161 SLFN5Q08AF3 891 aa29.16■■■□□ 2.26
CA9-204ENST00000617161 CCDC93Q567U6 631 aa29.16■■■□□ 2.26
CA9-204ENST00000617161 CCDC191Q8NCU4 936 aa29.16■■■□□ 2.26
CA9-204ENST00000617161 RBM17Q96I25 401 aaKnown RBP29.16■■■□□ 2.26
CA9-204ENST00000617161 TAOK3Q9H2K8 898 aa29.16■■■□□ 2.26
CA9-204ENST00000617161 GPBP1L1Q9HC44 474 aaPredicted RBP29.16■■■□□ 2.26
CA9-204ENST00000617161 E9PSI1 815 aa29.15■■■□□ 2.26
CA9-204ENST00000617161 ABCC4O15439 1325 aa29.15■■■□□ 2.26
CA9-204ENST00000617161 ZBTB38Q8NAP3 1195 aaPredicted RBP29.14■■■□□ 2.26
CA9-204ENST00000617161 COL4A1P02462 1669 aa29.14■■■□□ 2.26
CA9-204ENST00000617161 IRS4O14654 1257 aaPredicted RBP29.13■■■□□ 2.25
CA9-204ENST00000617161 CWC25Q9NXE8 425 aaPredicted RBP29.13■■■□□ 2.25
CA9-204ENST00000617161 FKBP5Q13451 457 aaPredicted RBP29.12■■■□□ 2.25
CA9-204ENST00000617161 CWF19L2Q2TBE0 894 aaKnown RBP29.12■■■□□ 2.25
CA9-204ENST00000617161 TRMT2AQ8IZ69 625 aaKnown RBP29.12■■■□□ 2.25
CA9-204ENST00000617161 JARID2Q92833 1246 aaPredicted RBP29.12■■■□□ 2.25
CA9-204ENST00000617161 PPEF1O14829 653 aaPredicted RBP29.11■■■□□ 2.25
CA9-204ENST00000617161 PCCAP05165 728 aaPredicted RBP29.11■■■□□ 2.25
CA9-204ENST00000617161 FKBP4Q02790 459 aaKnown RBP eCLIP29.1■■■□□ 2.25
CA9-204ENST00000617161 SF3B3Q15393 1217 aaKnown RBP29.1■■■□□ 2.25
CA9-204ENST00000617161 RTKN2Q8IZC4 609 aa29.1■■■□□ 2.25
CA9-204ENST00000617161 ZC3H4Q9UPT8 1303 aaKnown RBP29.1■■■□□ 2.25
CA9-204ENST00000617161 NEURL1BA8MQ27 555 aa29.09■■■□□ 2.25
CA9-204ENST00000617161 DNAAF4Q8WXU2 420 aa29.08■■■□□ 2.25
CA9-204ENST00000617161 NMRK2Q9NPI5 230 aa29.08■■■□□ 2.25
CA9-204ENST00000617161 KIF3CO14782 793 aa29.07■■■□□ 2.24
CA9-204ENST00000617161 NEXNQ0ZGT2 675 aa29.07■■■□□ 2.24
CA9-204ENST00000617161 ZNF277Q9NRM2 450 aaPredicted RBP29.07■■■□□ 2.24
CA9-204ENST00000617161 F6X3S4 739 aa29.06■■■□□ 2.24
CA9-204ENST00000617161 GRAPQ13588 217 aa29.06■■■□□ 2.24
CA9-204ENST00000617161 CC2D2BQ6DHV5 1058 aa29.06■■■□□ 2.24
CA9-204ENST00000617161 DDX46Q7L014 1031 aaKnown RBP29.06■■■□□ 2.24
CA9-204ENST00000617161 GRAPLQ8TC17 118 aaPredicted RBP29.06■■■□□ 2.24
CA9-204ENST00000617161 ATP6V0A2Q9Y487 856 aa29.06■■■□□ 2.24
CA9-204ENST00000617161 PSMD1Q99460 953 aa29.05■■■□□ 2.24
CA9-204ENST00000617161 CDHR2Q9BYE9 1310 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms