RNA–Protein interactions for RNA: ENST00000611776.4

ABCA13-208, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 1 (best)

Gene ABCA13, Length 7,250 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-208ENST00000611776 SMARCA4P51532 1647 aa8.12□□□□□ -1.11
ABCA13-208ENST00000611776 TRPA1O75762 1119 aa8.12□□□□□ -1.11
ABCA13-208ENST00000611776 GRIPAP1Q4V328 841 aa8.12□□□□□ -1.11
ABCA13-208ENST00000611776 CNPY2Q9Y2B0 182 aa8.12□□□□□ -1.11
ABCA13-208ENST00000611776 KIF21BO75037 1637 aa8.12□□□□□ -1.11
ABCA13-208ENST00000611776 PPFIA3O75145 1194 aa8.12□□□□□ -1.11
ABCA13-208ENST00000611776 SLC4A2P04920 1241 aa8.12□□□□□ -1.11
ABCA13-208ENST00000611776 SAP30BPQ9UHR5 308 aaKnown RBP8.12□□□□□ -1.11
ABCA13-208ENST00000611776 REC8O95072 547 aa8.11□□□□□ -1.11
ABCA13-208ENST00000611776 TPM3P06753 285 aa8.11□□□□□ -1.11
ABCA13-208ENST00000611776 SREBF2Q12772 1141 aa8.11□□□□□ -1.11
ABCA13-208ENST00000611776 LARP1Q6PKG0 1096 aaKnown RBP8.11□□□□□ -1.11
ABCA13-208ENST00000611776 CLASRPQ8N2M8 674 aaKnown RBP8.11□□□□□ -1.11
ABCA13-208ENST00000611776 ZFYVE28Q9HCC9 887 aa8.11□□□□□ -1.11
ABCA13-208ENST00000611776 TNPO2O14787 897 aaKnown RBP8.11□□□□□ -1.11
ABCA13-208ENST00000611776 SOX10P56693 466 aa8.11□□□□□ -1.11
ABCA13-208ENST00000611776 RNASELQ05823 741 aaKnown RBP8.11□□□□□ -1.11
ABCA13-208ENST00000611776 MAP3K12Q12852 859 aa8.11□□□□□ -1.11
ABCA13-208ENST00000611776 FHDC1Q9C0D6 1143 aaPredicted RBP8.11□□□□□ -1.11
ABCA13-208ENST00000611776 PCDH11XQ9BZA7 1347 aa8.11□□□□□ -1.11
ABCA13-208ENST00000611776 PCDH11YQ9BZA8 1340 aa8.11□□□□□ -1.11
ABCA13-208ENST00000611776 MYCLP12524 364 aaPredicted RBP8.11□□□□□ -1.11
ABCA13-208ENST00000611776 ATXN3P54252 364 aaPredicted RBP8.11□□□□□ -1.11
ABCA13-208ENST00000611776 ZBED4O75132 1171 aa8.11□□□□□ -1.11
ABCA13-208ENST00000611776 GCP02774 474 aa8.11□□□□□ -1.11
ABCA13-208ENST00000611776 VEGFAP15692 232 aaPredicted RBP8.11□□□□□ -1.11
ABCA13-208ENST00000611776 HELBQ8NG08 1087 aaPredicted RBP8.11□□□□□ -1.11
ABCA13-208ENST00000611776 HTATIP2Q9BUP3 242 aa8.11□□□□□ -1.11
ABCA13-208ENST00000611776 MFSD14CQ5VZR4 134 aa8.11□□□□□ -1.11
ABCA13-208ENST00000611776 SECISBP2LQ93073 1101 aaKnown RBP8.11□□□□□ -1.11
ABCA13-208ENST00000611776 PHLDB1Q86UU1 1377 aa8.1□□□□□ -1.11
ABCA13-208ENST00000611776 BCAMP50895 628 aa8.1□□□□□ -1.11
ABCA13-208ENST00000611776 SKIDA1Q1XH10 827 aa8.1□□□□□ -1.11
ABCA13-208ENST00000611776 RNF20Q5VTR2 975 aa8.1□□□□□ -1.11
ABCA13-208ENST00000611776 ZNF277Q9NRM2 450 aaPredicted RBP8.1□□□□□ -1.11
ABCA13-208ENST00000611776 ATN1P54259 1190 aaPredicted RBP8.1□□□□□ -1.11
ABCA13-208ENST00000611776 YAF2Q8IY57 180 aa8.1□□□□□ -1.11
ABCA13-208ENST00000611776 DPYSL4O14531 572 aa8.1□□□□□ -1.11
ABCA13-208ENST00000611776 MAP4K4O95819 1239 aaPredicted RBP8.1□□□□□ -1.11
ABCA13-208ENST00000611776 MYL3P08590 195 aa8.1□□□□□ -1.11
ABCA13-208ENST00000611776 AKAP2Q9Y2D5 859 aa8.1□□□□□ -1.11
ABCA13-208ENST00000611776 DHX8Q14562 1220 aaKnown RBP8.1□□□□□ -1.11
ABCA13-208ENST00000611776 DBNDD1Q9H9R9 158 aa8.1□□□□□ -1.11
ABCA13-208ENST00000611776 STX8Q9UNK0 236 aa8.1□□□□□ -1.11
ABCA13-208ENST00000611776 SCNN1DP51172 638 aa8.1□□□□□ -1.11
ABCA13-208ENST00000611776 ARPP19P56211 112 aa8.1□□□□□ -1.11
ABCA13-208ENST00000611776 DEFB115Q30KQ5 88 aa8.1□□□□□ -1.11
ABCA13-208ENST00000611776 PUF60Q9UHX1 559 aaKnown RBP8.1□□□□□ -1.11
ABCA13-208ENST00000611776 TXNRD1Q16881 649 aa8.1□□□□□ -1.11
ABCA13-208ENST00000611776 NSMFQ6X4W1 530 aa8.1□□□□□ -1.11
ABCA13-208ENST00000611776 ZGPATQ8N5A5 531 aaKnown RBP8.1□□□□□ -1.11
ABCA13-208ENST00000611776 NFATC2IPQ8NCF5 419 aa8.1□□□□□ -1.11
ABCA13-208ENST00000611776 ZNF592Q92610 1267 aa8.1□□□□□ -1.11
ABCA13-208ENST00000611776 CWC25Q9NXE8 425 aaPredicted RBP8.1□□□□□ -1.11
ABCA13-208ENST00000611776 CLGNO14967 610 aa8.09□□□□□ -1.11
ABCA13-208ENST00000611776 KIF5BP33176 963 aa8.09□□□□□ -1.11
ABCA13-208ENST00000611776 SH2D4AQ9H788 454 aa8.09□□□□□ -1.11
ABCA13-208ENST00000611776 TSPY2A6NKD2 308 aa8.09□□□□□ -1.11
ABCA13-208ENST00000611776 GTF2IP78347 998 aa8.09□□□□□ -1.11
ABCA13-208ENST00000611776 MCM10Q7L590 875 aa8.09□□□□□ -1.11
ABCA13-208ENST00000611776 LNPKQ9C0E8 428 aa8.09□□□□□ -1.11
ABCA13-208ENST00000611776 ATP11BQ9Y2G3 1177 aa8.09□□□□□ -1.11
ABCA13-208ENST00000611776 NDUFB9Q9Y6M9 179 aa8.09□□□□□ -1.11
ABCA13-208ENST00000611776 TLR3O15455 904 aaKnown RBP8.09□□□□□ -1.11
ABCA13-208ENST00000611776 SNRPA1P09661 255 aaKnown RBP8.09□□□□□ -1.11
ABCA13-208ENST00000611776 FYCO1Q9BQS8 1478 aa8.09□□□□□ -1.11
ABCA13-208ENST00000611776 EIF4G3O43432 1585 aaKnown RBP8.09□□□□□ -1.11
ABCA13-208ENST00000611776 SERPINB2P05120 415 aa8.09□□□□□ -1.11
ABCA13-208ENST00000611776 HCLS1P14317 486 aaPredicted RBP8.09□□□□□ -1.11
ABCA13-208ENST00000611776 USPL1Q5W0Q7 1092 aa8.09□□□□□ -1.11
ABCA13-208ENST00000611776 THUMPD2Q9BTF0 503 aaKnown RBP8.09□□□□□ -1.11
ABCA13-208ENST00000611776 TMEM265A0A087WTH1 108 aa8.09□□□□□ -1.11
ABCA13-208ENST00000611776 SSX2IPQ9Y2D8 614 aa8.08□□□□□ -1.12
ABCA13-208ENST00000611776 UPP2O95045 317 aa8.08□□□□□ -1.12
ABCA13-208ENST00000611776 TSPY3P0CV98 308 aa8.08□□□□□ -1.12
ABCA13-208ENST00000611776 TSPY8P0CW00 308 aa8.08□□□□□ -1.12
ABCA13-208ENST00000611776 SRCIN1Q9C0H9 1055 aa8.08□□□□□ -1.12
ABCA13-208ENST00000611776 PPEF1O14829 653 aaPredicted RBP8.08□□□□□ -1.12
ABCA13-208ENST00000611776 SRGAP3O43295 1099 aa8.08□□□□□ -1.12
ABCA13-208ENST00000611776 LDHBP07195 334 aaKnown RBP8.08□□□□□ -1.12
ABCA13-208ENST00000611776 ZFP91Q96JP5 570 aaPredicted RBP8.08□□□□□ -1.12
ABCA13-208ENST00000611776 RTKN2Q8IZC4 609 aa8.08□□□□□ -1.12
ABCA13-208ENST00000611776 SMARCC2Q8TAQ2 1214 aa8.08□□□□□ -1.12
ABCA13-208ENST00000611776 ADAMTS8Q9UP79 889 aa8.08□□□□□ -1.12
ABCA13-208ENST00000611776 BCAR3O75815 825 aa8.08□□□□□ -1.12
ABCA13-208ENST00000611776 MAP2K1Q02750 393 aaPredicted RBP8.08□□□□□ -1.12
ABCA13-208ENST00000611776 KCTD2Q14681 263 aa8.08□□□□□ -1.12
ABCA13-208ENST00000611776 GPR101Q96P66 508 aaPredicted RBP8.08□□□□□ -1.12
ABCA13-208ENST00000611776 ARHGEF10LQ9HCE6 1279 aa8.08□□□□□ -1.12
ABCA13-208ENST00000611776 RRBP1Q9P2E9 1410 aaKnown RBP8.08□□□□□ -1.12
ABCA13-208ENST00000611776 TXLNAP40222 546 aa8.07□□□□□ -1.12
ABCA13-208ENST00000611776 TNPO1Q92973 898 aaKnown RBP8.07□□□□□ -1.12
ABCA13-208ENST00000611776 ANKRD2Q9GZV1 360 aa8.07□□□□□ -1.12
ABCA13-208ENST00000611776 ZNF608Q9ULD9 1512 aaPredicted RBP8.07□□□□□ -1.12
ABCA13-208ENST00000611776 SPATA31A6Q5VVP1 1343 aa8.07□□□□□ -1.12
ABCA13-208ENST00000611776 PLEKHG3A1L390 1219 aa8.07□□□□□ -1.12
ABCA13-208ENST00000611776 MLLT1Q03111 559 aaPredicted RBP8.07□□□□□ -1.12
ABCA13-208ENST00000611776 AKNAD1Q5T1N1 836 aa8.07□□□□□ -1.12
ABCA13-208ENST00000611776 CCDC82Q8N4S0 544 aa8.07□□□□□ -1.12
ABCA13-208ENST00000611776 RAD50Q92878 1312 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms