RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 C9orf131Q5VYM1 1079 aa18.57■□□□□ 0.56
TUBE1-208ENST00000604743 DIEXFQ68CQ4 756 aaKnown RBP18.57■□□□□ 0.56
TUBE1-208ENST00000604743 PRPF40BQ6NWY9 871 aaKnown RBP18.57■□□□□ 0.56
TUBE1-208ENST00000604743 CHMP4AQ9BY43 222 aa18.57■□□□□ 0.56
TUBE1-208ENST00000604743 SPINK5Q9NQ38 1064 aaPredicted RBP18.57■□□□□ 0.56
TUBE1-208ENST00000604743 IBTKQ9P2D0 1353 aaPredicted RBP18.56■□□□□ 0.56
TUBE1-208ENST00000604743 ATP5J2-PTCD1G3V325 749 aa18.56■□□□□ 0.56
TUBE1-208ENST00000604743 GOLGA2Q08379 1002 aa18.56■□□□□ 0.56
TUBE1-208ENST00000604743 NLRP10Q86W26 655 aa18.56■□□□□ 0.56
TUBE1-208ENST00000604743 STK31Q9BXU1 1019 aa18.56■□□□□ 0.56
TUBE1-208ENST00000604743 KLRG2A4D1S0 409 aaPredicted RBP18.55■□□□□ 0.56
TUBE1-208ENST00000604743 EXOSC9Q06265 439 aaKnown RBP18.55■□□□□ 0.56
TUBE1-208ENST00000604743 RNF181Q9P0P0 153 aa18.55■□□□□ 0.56
TUBE1-208ENST00000604743 TRMT112Q9UI30 125 aaKnown RBP18.55■□□□□ 0.56
TUBE1-208ENST00000604743 ADCY9O60503 1353 aa18.55■□□□□ 0.56
TUBE1-208ENST00000604743 RPGRQ92834 1020 aaKnown RBP18.54■□□□□ 0.56
TUBE1-208ENST00000604743 MYH16Q9H6N6 1097 aa18.54■□□□□ 0.56
TUBE1-208ENST00000604743 FER1L6Q2WGJ9 1857 aa18.53■□□□□ 0.56
TUBE1-208ENST00000604743 C3orf67Q6ZVT6 689 aa18.53■□□□□ 0.56
TUBE1-208ENST00000604743 SYNE4Q8N205 404 aa18.53■□□□□ 0.56
TUBE1-208ENST00000604743 NLRP3Q96P20 1036 aa18.53■□□□□ 0.56
TUBE1-208ENST00000604743 MYD88Q99836 296 aa18.53■□□□□ 0.56
TUBE1-208ENST00000604743 CACNA1FO60840 1977 aa18.52■□□□□ 0.56
TUBE1-208ENST00000604743 DDX58O95786 925 aaKnown RBP18.52■□□□□ 0.56
TUBE1-208ENST00000604743 SLC4A2P04920 1241 aa18.52■□□□□ 0.56
TUBE1-208ENST00000604743 HCLS1P14317 486 aaPredicted RBP18.52■□□□□ 0.56
TUBE1-208ENST00000604743 ALDH1B1P30837 517 aa18.52■□□□□ 0.56
TUBE1-208ENST00000604743 RTL5Q5HYW3 569 aaPredicted RBP18.52■□□□□ 0.56
TUBE1-208ENST00000604743 ISCA1Q9BUE6 129 aa18.52■□□□□ 0.56
TUBE1-208ENST00000604743 GPBP1L1Q9HC44 474 aaPredicted RBP18.52■□□□□ 0.56
TUBE1-208ENST00000604743 LAMB2P55268 1798 aa18.52■□□□□ 0.55
TUBE1-208ENST00000604743 NFKBIEO00221 500 aa18.51■□□□□ 0.55
TUBE1-208ENST00000604743 VAMP4O75379 141 aa18.51■□□□□ 0.55
TUBE1-208ENST00000604743 CRY2Q49AN0 593 aa18.51■□□□□ 0.55
TUBE1-208ENST00000604743 G2E3Q7L622 706 aa18.51■□□□□ 0.55
TUBE1-208ENST00000604743 MIER1Q8N108 512 aa18.51■□□□□ 0.55
TUBE1-208ENST00000604743 SH3TC1Q8TE82 1336 aa18.5■□□□□ 0.55
TUBE1-208ENST00000604743 RIC1Q4ADV7 1423 aa18.5■□□□□ 0.55
TUBE1-208ENST00000604743 PRELPP51888 382 aa18.5■□□□□ 0.55
TUBE1-208ENST00000604743 SLC10A5Q5PT55 438 aa18.5■□□□□ 0.55
TUBE1-208ENST00000604743 OLFM4Q6UX06 510 aa18.5■□□□□ 0.55
TUBE1-208ENST00000604743 FAM89AQ96GI7 184 aa18.5■□□□□ 0.55
TUBE1-208ENST00000604743 RBM17Q96I25 401 aaKnown RBP18.5■□□□□ 0.55
TUBE1-208ENST00000604743 MAP3K2Q9Y2U5 619 aa18.5■□□□□ 0.55
TUBE1-208ENST00000604743 RNF123Q5XPI4 1314 aa18.49■□□□□ 0.55
TUBE1-208ENST00000604743 ZNF521Q96K83 1311 aa18.49■□□□□ 0.55
TUBE1-208ENST00000604743 PI4KAP2A4QPH2 592 aa18.49■□□□□ 0.55
TUBE1-208ENST00000604743 LMNB1P20700 586 aa18.49■□□□□ 0.55
TUBE1-208ENST00000604743 SOGA3Q5TF21 947 aa18.49■□□□□ 0.55
TUBE1-208ENST00000604743 PI4KAP1Q8N8J0 262 aa18.49■□□□□ 0.55
TUBE1-208ENST00000604743 TAF1P21675 1872 aa18.48■□□□□ 0.55
TUBE1-208ENST00000604743 CCDC93Q567U6 631 aa18.48■□□□□ 0.55
TUBE1-208ENST00000604743 KSR2Q6VAB6 950 aa18.48■□□□□ 0.55
TUBE1-208ENST00000604743 C7orf43Q8WVR3 580 aa18.48■□□□□ 0.55
TUBE1-208ENST00000604743 TAOK3Q9H2K8 898 aa18.48■□□□□ 0.55
TUBE1-208ENST00000604743 DDX60Q8IY21 1712 aaKnown RBP18.48■□□□□ 0.55
TUBE1-208ENST00000604743 DICER1Q9UPY3 1922 aaKnown RBP18.47■□□□□ 0.55
TUBE1-208ENST00000604743 HOXA10P31260 410 aaPredicted RBP18.47■□□□□ 0.55
TUBE1-208ENST00000604743 METTL22Q9BUU2 404 aaPredicted RBP18.47■□□□□ 0.55
TUBE1-208ENST00000604743 TIAM2Q8IVF5 1701 aa18.46■□□□□ 0.55
TUBE1-208ENST00000604743 TRIM28Q13263 835 aaKnown RBP18.46■□□□□ 0.55
TUBE1-208ENST00000604743 JARID2Q92833 1246 aaPredicted RBP18.46■□□□□ 0.55
TUBE1-208ENST00000604743 CRAMP1Q96RY5 1269 aa18.46■□□□□ 0.55
TUBE1-208ENST00000604743 FLIIQ13045 1269 aa18.45■□□□□ 0.54
TUBE1-208ENST00000604743 FKBP5Q13451 457 aaPredicted RBP18.45■□□□□ 0.54
TUBE1-208ENST00000604743 CWC25Q9NXE8 425 aaPredicted RBP18.45■□□□□ 0.54
TUBE1-208ENST00000604743 IRS4O14654 1257 aaPredicted RBP18.44■□□□□ 0.54
TUBE1-208ENST00000604743 PPEF1O14829 653 aaPredicted RBP18.44■□□□□ 0.54
TUBE1-208ENST00000604743 NEXNQ0ZGT2 675 aa18.44■□□□□ 0.54
TUBE1-208ENST00000604743 SLC51AQ86UW1 340 aa18.44■□□□□ 0.54
TUBE1-208ENST00000604743 CCDC191Q8NCU4 936 aa18.44■□□□□ 0.54
TUBE1-208ENST00000604743 ABCC4O15439 1325 aa18.44■□□□□ 0.54
TUBE1-208ENST00000604743 E9PSI1 815 aa18.43■□□□□ 0.54
TUBE1-208ENST00000604743 DDX46Q7L014 1031 aaKnown RBP18.43■□□□□ 0.54
TUBE1-208ENST00000604743 RTKN2Q8IZC4 609 aa18.43■□□□□ 0.54
TUBE1-208ENST00000604743 ZBTB38Q8NAP3 1195 aaPredicted RBP18.43■□□□□ 0.54
TUBE1-208ENST00000604743 CDCA7LQ96GN5 454 aa18.43■□□□□ 0.54
TUBE1-208ENST00000604743 LTBP3Q9NS15 1303 aa18.43■□□□□ 0.54
TUBE1-208ENST00000604743 FKBP4Q02790 459 aaKnown RBP eCLIP18.42■□□□□ 0.54
TUBE1-208ENST00000604743 SLFN5Q08AF3 891 aa18.42■□□□□ 0.54
TUBE1-208ENST00000604743 CWF19L2Q2TBE0 894 aaKnown RBP18.42■□□□□ 0.54
TUBE1-208ENST00000604743 NMRK2Q9NPI5 230 aa18.42■□□□□ 0.54
TUBE1-208ENST00000604743 ZNF277Q9NRM2 450 aaPredicted RBP18.42■□□□□ 0.54
TUBE1-208ENST00000604743 PCCAP05165 728 aaPredicted RBP18.41■□□□□ 0.54
TUBE1-208ENST00000604743 IGKV5-2P06315 115 aa18.41■□□□□ 0.54
TUBE1-208ENST00000604743 TMX4Q9H1E5 349 aaPredicted RBP18.41■□□□□ 0.54
TUBE1-208ENST00000604743 KDM2BQ8NHM5 1336 aa18.41■□□□□ 0.54
TUBE1-208ENST00000604743 CC2D2BQ6DHV5 1058 aa18.4■□□□□ 0.54
TUBE1-208ENST00000604743 DNAAF4Q8WXU2 420 aa18.4■□□□□ 0.54
TUBE1-208ENST00000604743 NEURL1BA8MQ27 555 aa18.39■□□□□ 0.53
TUBE1-208ENST00000604743 C1QTNF8P60827 252 aa18.39■□□□□ 0.53
TUBE1-208ENST00000604743 GRAPQ13588 217 aa18.39■□□□□ 0.53
TUBE1-208ENST00000604743 SF3B3Q15393 1217 aaKnown RBP18.39■□□□□ 0.53
TUBE1-208ENST00000604743 GRAPLQ8TC17 118 aaPredicted RBP18.39■□□□□ 0.53
TUBE1-208ENST00000604743 CCDC85AQ96PX6 553 aaPredicted RBP18.39■□□□□ 0.53
TUBE1-208ENST00000604743 RRAGCQ9HB90 399 aa18.39■□□□□ 0.53
TUBE1-208ENST00000604743 ZC3H4Q9UPT8 1303 aaKnown RBP18.39■□□□□ 0.53
TUBE1-208ENST00000604743 F6X3S4 739 aa18.38■□□□□ 0.53
TUBE1-208ENST00000604743 KIF3CO14782 793 aa18.38■□□□□ 0.53
TUBE1-208ENST00000604743 BBOX1O75936 387 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 160.2 ms