RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	DNAJC2	Q99543	621 aa	Known RBP	13.83	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	CBX8	Q9HC52	389 aa		13.83	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	CLIP2	Q9UDT6	1046 aa		13.83	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	PYCARD	Q9ULZ3	195 aa		13.83	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	NCAPD2	Q15021	1401 aa		13.82	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	SURF6	O75683	361 aa	Known RBP	13.82	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	DNM1	Q05193	864 aa	Known RBP	13.82	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	CCDC186	Q7Z3E2	898 aa		13.82	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	FILIP1	Q7Z7B0	1213 aa		13.82	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	LRRC8A	Q8IWT6	810 aa		13.82	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	MSL3	Q8N5Y2	521 aa	Known RBP	13.82	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	ZNF396	Q96N95	335 aa	Predicted RBP	13.82	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	NOL10	Q9BSC4	688 aa	Known RBP	13.82	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	L2HGDH	Q9H9P8	463 aa		13.82	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	LRRFIP2	Q9Y608	721 aa	Known RBP	13.82	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	ANKAR	Q7Z5J8	1434 aa		13.81	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	PNMA6E	A0A0J9YXQ4	647 aa		13.81	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	GPS2	Q13227	327 aa		13.81	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	JAKMIP3	Q5VZ66	844 aa		13.81	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	BLOC1S2	Q6QNY1	142 aa		13.81	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	CEP57L1	Q8IYX8	460 aa		13.81	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	MED1	Q15648	1581 aa	Predicted RBP	13.8	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	TUBB	P07437	444 aa		13.8	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	PTGS1	P23219	599 aa		13.8	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	ANO6	Q4KMQ2	910 aa		13.8	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	PPP1R42	Q7Z4L9	355 aa		13.8	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	TTC6	Q86TZ1	520 aa		13.8	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	LEO1	Q8WVC0	666 aa	Predicted RBP	13.8	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	JAKMIP1	Q96N16	626 aa	Known RBP	13.8	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	GDPD2	Q9HCC8	539 aa		13.8	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	APBB1	O00213	710 aa		13.79	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	SLFN14	P0C7P3	912 aa		13.79	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	TUBB2A	Q13885	445 aa		13.79	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	DCTN1	Q14203	1278 aa		13.79	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	RRS1	Q15050	365 aa	Known RBP	13.79	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.79	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	USPL1	Q5W0Q7	1092 aa		13.79	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	MCM10	Q7L590	875 aa		13.79	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	FBXL16	Q8N461	479 aa		13.79	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.79	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	TUBB2B	Q9BVA1	445 aa		13.79	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	DACT1	Q9NYF0	836 aa		13.79	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	RCOR1	Q9UKL0	485 aa		13.79	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	COL15A1	P39059	1388 aa		13.79	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	CEMIP	Q8WUJ3	1361 aa		13.79	□□□□□ -0.2
U2AF1L4-221	ENST00000601236		A0A1W2PQ27	194 aa		13.78	□□□□□ -0.2
U2AF1L4-221	ENST00000601236		A0A1W2PQ64	194 aa		13.78	□□□□□ -0.2
U2AF1L4-221	ENST00000601236		A0A1W2PQD8	194 aa		13.78	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	VPS37C	A5D8V6	355 aa	Predicted RBP	13.78	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	BECN2	A8MW95	431 aa		13.78	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	RPS6KB1	P23443	525 aa		13.78	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	U2AF2	P26368	475 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	MTHFSD	Q2M296	383 aa	Known RBP	13.78	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	CTR9	Q6PD62	1173 aa		13.78	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	CCDC73	Q6ZRK6	1079 aa		13.78	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	CCDC83	Q8IWF9	413 aa		13.78	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	ZNF830	Q96NB3	372 aa	Predicted RBP	13.78	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	UTY	O14607	1347 aa		13.78	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	PHLPP2	Q6ZVD8	1323 aa		13.78	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	MRC1	P22897	1456 aa		13.78	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	SRGAP3	O43295	1099 aa		13.77	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	IFIT2	P09913	472 aa	Known RBP	13.77	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	PLCB2	Q00722	1185 aa		13.77	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	TCHH	Q07283	1943 aa		13.77	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	IQCB1	Q15051	598 aa		13.77	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	MAP3K19	Q56UN5	1328 aa		13.77	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	CREB3L3	Q68CJ9	461 aa		13.77	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	RASEF	Q8IZ41	740 aa		13.77	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	TXLNB	Q8N3L3	684 aa		13.77	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	DNAAF4	Q8WXU2	420 aa		13.77	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	DDX11	Q96FC9	970 aa		13.77	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	PEAK1	Q9H792	1746 aa		13.77	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.77	□□□□□ -0.21
U2AF1L4-221	ENST00000601236		U3KPZ7	1027 aa	Predicted RBP	13.77	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	MED23	Q9ULK4	1368 aa		13.76	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	CBFA2T2	O43439	604 aa		13.76	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	KIN	O60870	393 aa	Known RBP	13.76	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	H2AFX	P16104	143 aa	Predicted RBP	13.76	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	ME3	Q16798	604 aa		13.76	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	KRT24	Q2M2I5	525 aa		13.76	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	MUM1L1	Q5H9M0	696 aa		13.76	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	HDGFL1	Q5TGJ6	251 aa		13.76	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.76	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	G2E3	Q7L622	706 aa		13.76	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	ELOA2	Q8IYF1	753 aa	Predicted RBP	13.76	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	CCAR2	Q8N163	923 aa	Known RBP	13.76	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	CWC15	Q9P013	229 aa	Known RBP	13.76	□□□□□ -0.21
U2AF1L4-221	ENST00000601236		F6X3S4	739 aa		13.75	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	SKIL	P12757	684 aa		13.75	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	CDK11B	P21127	795 aa	Known RBP	13.75	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	KCNJ4	P48050	445 aa		13.75	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	FAM160A1	Q05DH4	1040 aa		13.75	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	ZRSR1	Q15695	479 aa	Known RBP	13.75	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	BEND3	Q5T5X7	828 aa		13.75	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	UNC5CL	Q8IV45	518 aa		13.75	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	BICD2	Q8TD16	824 aa		13.75	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	GTF3C6	Q969F1	213 aa		13.75	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	C16orf45	Q96MC5	204 aa	Predicted RBP	13.75	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	PSD3	Q9NYI0	1048 aa		13.75	□□□□□ -0.21
U2AF1L4-221	ENST00000601236	RBM8A	Q9Y5S9	174 aa	Known RBP	13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms