RNA–Protein interactions for RNA: ENST00000600648.1

FARP1-231, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-231	ENST00000600648	IBTK	Q9P2D0	1353 aa	Predicted RBP	28.18	■■■□□ 2.1
FARP1-231	ENST00000600648	C3orf67	Q6ZVT6	689 aa		28.17	■■■□□ 2.1
FARP1-231	ENST00000600648	PPP1R42	Q7Z4L9	355 aa		28.17	■■■□□ 2.1
FARP1-231	ENST00000600648	TCERG1	O14776	1098 aa	Known RBP	28.16	■■■□□ 2.1
FARP1-231	ENST00000600648	PARP10	Q53GL7	1025 aa		28.16	■■■□□ 2.1
FARP1-231	ENST00000600648	SYNE4	Q8N205	404 aa		28.16	■■■□□ 2.1
FARP1-231	ENST00000600648	UTP14A	Q9BVJ6	771 aa	Known RBP	28.15	■■■□□ 2.1
FARP1-231	ENST00000600648	SLC51A	Q86UW1	340 aa		28.14	■■■□□ 2.1
FARP1-231	ENST00000600648	HOXA10	P31260	410 aa	Predicted RBP	28.13	■■■□□ 2.09
FARP1-231	ENST00000600648	IARS	P41252	1262 aa	Known RBP	28.13	■■■□□ 2.09
FARP1-231	ENST00000600648	RBM17	Q96I25	401 aa	Known RBP	28.13	■■■□□ 2.09
FARP1-231	ENST00000600648	DDX21	Q9NR30	783 aa	Known RBP eCLIP	28.13	■■■□□ 2.09
FARP1-231	ENST00000600648	CHPF2	Q9P2E5	772 aa		28.13	■■■□□ 2.09
FARP1-231	ENST00000600648	ZNF541	Q9H0D2	1346 aa		28.13	■■■□□ 2.09
FARP1-231	ENST00000600648	RIC1	Q4ADV7	1423 aa		28.12	■■■□□ 2.09
FARP1-231	ENST00000600648	HDGFL1	Q5TGJ6	251 aa		28.12	■■■□□ 2.09
FARP1-231	ENST00000600648	ZNF428	Q96B54	188 aa		28.12	■■■□□ 2.09
FARP1-231	ENST00000600648	POTEI	P0CG38	1075 aa		28.11	■■■□□ 2.09
FARP1-231	ENST00000600648	POTEJ	P0CG39	1038 aa		28.11	■■■□□ 2.09
FARP1-231	ENST00000600648	KLRG1	Q96E93	195 aa		28.11	■■■□□ 2.09
FARP1-231	ENST00000600648	NLRP3	Q96P20	1036 aa		28.11	■■■□□ 2.09
FARP1-231	ENST00000600648	APAF1	O14727	1248 aa		28.1	■■■□□ 2.09
FARP1-231	ENST00000600648	HSP90AB3P	Q58FF7	597 aa		28.1	■■■□□ 2.09
FARP1-231	ENST00000600648	PPEF1	O14829	653 aa	Predicted RBP	28.09	■■■□□ 2.09
FARP1-231	ENST00000600648	NLRP10	Q86W26	655 aa		28.09	■■■□□ 2.09
FARP1-231	ENST00000600648	CFAP44	Q96MT7	982 aa		28.09	■■■□□ 2.09
FARP1-231	ENST00000600648	CRAMP1	Q96RY5	1269 aa		28.09	■■■□□ 2.09
FARP1-231	ENST00000600648	CC2D2B	Q6DHV5	1058 aa		28.08	■■■□□ 2.09
FARP1-231	ENST00000600648	PSMD1	Q99460	953 aa		28.08	■■■□□ 2.09
FARP1-231	ENST00000600648	SNED1	Q8TER0	1413 aa		28.08	■■■□□ 2.09
FARP1-231	ENST00000600648	HCLS1	P14317	486 aa	Predicted RBP	28.07	■■■□□ 2.08
FARP1-231	ENST00000600648	TCIRG1	Q13488	830 aa		28.07	■■■□□ 2.08
FARP1-231	ENST00000600648	SLC10A5	Q5PT55	438 aa		28.07	■■■□□ 2.08
FARP1-231	ENST00000600648	MBIP	Q9NS73	344 aa		28.07	■■■□□ 2.08
FARP1-231	ENST00000600648	IQCA1L	A6NCM1	817 aa		28.06	■■■□□ 2.08
FARP1-231	ENST00000600648	DUSP27	Q5VZP5	1158 aa		28.06	■■■□□ 2.08
FARP1-231	ENST00000600648	CHADL	Q6NUI6	762 aa		28.06	■■■□□ 2.08
FARP1-231	ENST00000600648	L3MBTL3	Q96JM7	780 aa	Predicted RBP	28.06	■■■□□ 2.08
FARP1-231	ENST00000600648	TRMT112	Q9UI30	125 aa	Known RBP	28.06	■■■□□ 2.08
FARP1-231	ENST00000600648	JDP2	Q8WYK2	163 aa		28.05	■■■□□ 2.08
FARP1-231	ENST00000600648	TAF1D	Q9H5J8	278 aa	Predicted RBP	28.05	■■■□□ 2.08
FARP1-231	ENST00000600648	FZD9	O00144	591 aa		28.04	■■■□□ 2.08
FARP1-231	ENST00000600648	HOXB7	P09629	217 aa		28.04	■■■□□ 2.08
FARP1-231	ENST00000600648	ABCC4	O15439	1325 aa		28.03	■■■□□ 2.08
FARP1-231	ENST00000600648	EAPP	Q56P03	285 aa	Predicted RBP	28.03	■■■□□ 2.08
FARP1-231	ENST00000600648	DBF4	Q9UBU7	674 aa	Predicted RBP	28.03	■■■□□ 2.08
FARP1-231	ENST00000600648	ANKRD36C	Q5JPF3	1778 aa		28.02	■■■□□ 2.08
FARP1-231	ENST00000600648	LARGE2	Q8N3Y3	721 aa		28.02	■■■□□ 2.08
FARP1-231	ENST00000600648	PLBD2	Q8NHP8	589 aa		28.02	■■■□□ 2.08
FARP1-231	ENST00000600648	COL4A5	P29400	1685 aa		28.01	■■■□□ 2.07
FARP1-231	ENST00000600648	RNF123	Q5XPI4	1314 aa		28.01	■■■□□ 2.07
FARP1-231	ENST00000600648	SH3TC1	Q8TE82	1336 aa		28.01	■■■□□ 2.07
FARP1-231	ENST00000600648	ELL2	O00472	640 aa	Predicted RBP	28.01	■■■□□ 2.07
FARP1-231	ENST00000600648	ZNF853	P0CG23	659 aa		28.01	■■■□□ 2.07
FARP1-231	ENST00000600648	ANKRD13D	Q6ZTN6	518 aa		28.01	■■■□□ 2.07
FARP1-231	ENST00000600648	TMX4	Q9H1E5	349 aa	Predicted RBP	28.01	■■■□□ 2.07
FARP1-231	ENST00000600648	HACL1	Q9UJ83	578 aa		28.01	■■■□□ 2.07
FARP1-231	ENST00000600648	GJA3	Q9Y6H8	435 aa		28.01	■■■□□ 2.07
FARP1-231	ENST00000600648	ATP5J2-PTCD1	G3V325	749 aa		28	■■■□□ 2.07
FARP1-231	ENST00000600648	EIF6	P56537	245 aa	Known RBP	28	■■■□□ 2.07
FARP1-231	ENST00000600648	CCDC184	Q52MB2	194 aa		28	■■■□□ 2.07
FARP1-231	ENST00000600648	IFT57	Q9NWB7	429 aa		28	■■■□□ 2.07
FARP1-231	ENST00000600648	ATP6V0A2	Q9Y487	856 aa		28	■■■□□ 2.07
FARP1-231	ENST00000600648	GRIPAP1	Q4V328	841 aa		27.99	■■■□□ 2.07
FARP1-231	ENST00000600648	LDHD	Q86WU2	507 aa		27.99	■■■□□ 2.07
FARP1-231	ENST00000600648	JMY	Q8N9B5	988 aa		27.99	■■■□□ 2.07
FARP1-231	ENST00000600648	HYPK	Q9NX55	129 aa		27.99	■■■□□ 2.07
FARP1-231	ENST00000600648	CLEC11A	Q9Y240	323 aa		27.99	■■■□□ 2.07
FARP1-231	ENST00000600648	EPHX2	P34913	555 aa		27.98	■■■□□ 2.07
FARP1-231	ENST00000600648	GNAI1	P63096	354 aa		27.98	■■■□□ 2.07
FARP1-231	ENST00000600648	DDX46	Q7L014	1031 aa	Known RBP	27.98	■■■□□ 2.07
FARP1-231	ENST00000600648	GPC2	Q8N158	579 aa		27.98	■■■□□ 2.07
FARP1-231	ENST00000600648	SCN4A	P35499	1836 aa		27.97	■■■□□ 2.07
FARP1-231	ENST00000600648	PPIP5K2	O43314	1243 aa		27.97	■■■□□ 2.07
FARP1-231	ENST00000600648	CALD1	Q05682	793 aa	Known RBP	27.97	■■■□□ 2.07
FARP1-231	ENST00000600648	RTL5	Q5HYW3	569 aa	Predicted RBP	27.96	■■■□□ 2.07
FARP1-231	ENST00000600648	IFFO2	Q5TF58	517 aa		27.96	■■■□□ 2.07
FARP1-231	ENST00000600648	FAM89A	Q96GI7	184 aa		27.96	■■■□□ 2.07
FARP1-231	ENST00000600648	ISCA1	Q9BUE6	129 aa		27.96	■■■□□ 2.07
FARP1-231	ENST00000600648	PCNT	O95613	3336 aa		27.95	■■■□□ 2.06
FARP1-231	ENST00000600648	BBOX1	O75936	387 aa		27.95	■■■□□ 2.06
FARP1-231	ENST00000600648	AOC3	Q16853	763 aa		27.95	■■■□□ 2.06
FARP1-231	ENST00000600648	NIM1K	Q8IY84	436 aa		27.95	■■■□□ 2.06
FARP1-231	ENST00000600648	LAMB2	P55268	1798 aa		27.94	■■■□□ 2.06
FARP1-231	ENST00000600648	PHAX	Q9H814	394 aa	Known RBP	27.94	■■■□□ 2.06
FARP1-231	ENST00000600648	GRAP	Q13588	217 aa		27.93	■■■□□ 2.06
FARP1-231	ENST00000600648	DPP8	Q6V1X1	898 aa	Predicted RBP	27.93	■■■□□ 2.06
FARP1-231	ENST00000600648	SP8	Q8IXZ3	490 aa		27.93	■■■□□ 2.06
FARP1-231	ENST00000600648	C8orf58	Q8NAV2	365 aa		27.93	■■■□□ 2.06
FARP1-231	ENST00000600648	GRAPL	Q8TC17	118 aa	Predicted RBP	27.93	■■■□□ 2.06
FARP1-231	ENST00000600648	RIC3	Q7Z5B4	369 aa		27.92	■■■□□ 2.06
FARP1-231	ENST00000600648	GOLGA2	Q08379	1002 aa		27.91	■■■□□ 2.06
FARP1-231	ENST00000600648	PNMA8A	Q86V59	439 aa	Predicted RBP	27.91	■■■□□ 2.06
FARP1-231	ENST00000600648	MPND	Q8N594	471 aa		27.91	■■■□□ 2.06
FARP1-231	ENST00000600648	CREBZF	Q9NS37	354 aa		27.91	■■■□□ 2.06
FARP1-231	ENST00000600648	MKRN1	Q9UHC7	482 aa	Known RBP	27.91	■■■□□ 2.06
FARP1-231	ENST00000600648	LMOD1	P29536	600 aa	Predicted RBP	27.9	■■■□□ 2.06
FARP1-231	ENST00000600648	SUPT20H	Q8NEM7	779 aa		27.9	■■■□□ 2.06
FARP1-231	ENST00000600648	PASK	Q96RG2	1323 aa		27.9	■■■□□ 2.06
FARP1-231	ENST00000600648	MAP1S	Q66K74	1059 aa	Predicted RBP	27.89	■■■□□ 2.06

Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms