RNA–Protein interactions for RNA: ENST00000600297.1

SLC27A1-209, Transcript of solute carrier family 27 member 1, humanhuman

TSL 2

Gene SLC27A1, Length 1,163 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1-209ENST00000600297 UBN2Q6ZU65 1347 aa29.83■■■□□ 2.37
SLC27A1-209ENST00000600297 FAM177BA6PVY3 158 aa29.83■■■□□ 2.37
SLC27A1-209ENST00000600297 TCIRG1Q13488 830 aa29.83■■■□□ 2.37
SLC27A1-209ENST00000600297 KDM2BQ8NHM5 1336 aa29.82■■■□□ 2.36
SLC27A1-209ENST00000600297 LMNB1P20700 586 aa29.82■■■□□ 2.36
SLC27A1-209ENST00000600297 EXOSC9Q06265 439 aaKnown RBP29.82■■■□□ 2.36
SLC27A1-209ENST00000600297 CNKSR1Q969H4 720 aa29.82■■■□□ 2.36
SLC27A1-209ENST00000600297 NMRK2Q9NPI5 230 aa29.82■■■□□ 2.36
SLC27A1-209ENST00000600297 STYK1Q6J9G0 422 aa29.81■■■□□ 2.36
SLC27A1-209ENST00000600297 RNF123Q5XPI4 1314 aa29.8■■■□□ 2.36
SLC27A1-209ENST00000600297 KLRG2A4D1S0 409 aaPredicted RBP29.8■■■□□ 2.36
SLC27A1-209ENST00000600297 E9PSI1 815 aa29.8■■■□□ 2.36
SLC27A1-209ENST00000600297 C21orf2O43822 256 aa29.8■■■□□ 2.36
SLC27A1-209ENST00000600297 VAMP4O75379 141 aa29.8■■■□□ 2.36
SLC27A1-209ENST00000600297 DDX58O95786 925 aaKnown RBP29.8■■■□□ 2.36
SLC27A1-209ENST00000600297 SUSD4Q5VX71 490 aa29.8■■■□□ 2.36
SLC27A1-209ENST00000600297 MASTLQ96GX5 879 aa29.8■■■□□ 2.36
SLC27A1-209ENST00000600297 PHAXQ9H814 394 aaKnown RBP29.8■■■□□ 2.36
SLC27A1-209ENST00000600297 SRGNP10124 158 aa29.79■■■□□ 2.36
SLC27A1-209ENST00000600297 RIC1Q4ADV7 1423 aa29.79■■■□□ 2.36
SLC27A1-209ENST00000600297 ZC3H4Q9UPT8 1303 aaKnown RBP29.78■■■□□ 2.36
SLC27A1-209ENST00000600297 RIC3Q7Z5B4 369 aa29.78■■■□□ 2.36
SLC27A1-209ENST00000600297 NFKBIEO00221 500 aa29.77■■■□□ 2.36
SLC27A1-209ENST00000600297 NTSR2O95665 410 aa29.77■■■□□ 2.36
SLC27A1-209ENST00000600297 NLRP10Q86W26 655 aa29.77■■■□□ 2.36
SLC27A1-209ENST00000600297 UTP14AQ9BVJ6 771 aaKnown RBP29.77■■■□□ 2.36
SLC27A1-209ENST00000600297 PRPF40BQ6NWY9 871 aaKnown RBP29.76■■■□□ 2.35
SLC27A1-209ENST00000600297 C16orf71Q8IYS4 520 aaPredicted RBP29.76■■■□□ 2.35
SLC27A1-209ENST00000600297 TOMM70O94826 608 aa29.75■■■□□ 2.35
SLC27A1-209ENST00000600297 SLC4A2P04920 1241 aa29.75■■■□□ 2.35
SLC27A1-209ENST00000600297 HSPA6P17066 643 aa29.75■■■□□ 2.35
SLC27A1-209ENST00000600297 TRIM28Q13263 835 aaKnown RBP29.75■■■□□ 2.35
SLC27A1-209ENST00000600297 ERFEQ4G0M1 354 aa29.75■■■□□ 2.35
SLC27A1-209ENST00000600297 NUTM1Q86Y26 1132 aa29.75■■■□□ 2.35
SLC27A1-209ENST00000600297 ISCA1Q9BUE6 129 aa29.75■■■□□ 2.35
SLC27A1-209ENST00000600297 SLFN5Q08AF3 891 aa29.74■■■□□ 2.35
SLC27A1-209ENST00000600297 NPR1P16066 1061 aa29.73■■■□□ 2.35
SLC27A1-209ENST00000600297 PRELPP51888 382 aa29.73■■■□□ 2.35
SLC27A1-209ENST00000600297 SOGA3Q5TF21 947 aa29.73■■■□□ 2.35
SLC27A1-209ENST00000600297 SLC10A5Q5PT55 438 aa29.72■■■□□ 2.35
SLC27A1-209ENST00000600297 ABCC12Q96J65 1359 aa29.72■■■□□ 2.35
SLC27A1-209ENST00000600297 TCERG1O14776 1098 aaKnown RBP29.71■■■□□ 2.35
SLC27A1-209ENST00000600297 CRY2Q49AN0 593 aa29.71■■■□□ 2.35
SLC27A1-209ENST00000600297 KSR2Q6VAB6 950 aa29.71■■■□□ 2.35
SLC27A1-209ENST00000600297 TAOK3Q9H2K8 898 aa29.71■■■□□ 2.35
SLC27A1-209ENST00000600297 TRMT112Q9UI30 125 aaKnown RBP29.71■■■□□ 2.35
SLC27A1-209ENST00000600297 RRAGCQ9HB90 399 aa29.7■■■□□ 2.35
SLC27A1-209ENST00000600297 METTL22Q9BUU2 404 aaPredicted RBP29.69■■■□□ 2.34
SLC27A1-209ENST00000600297 SH3TC1Q8TE82 1336 aa29.69■■■□□ 2.34
SLC27A1-209ENST00000600297 LTBP3Q9NS15 1303 aa29.69■■■□□ 2.34
SLC27A1-209ENST00000600297 ALDH1B1P30837 517 aa29.68■■■□□ 2.34
SLC27A1-209ENST00000600297 NLRP3Q96P20 1036 aa29.68■■■□□ 2.34
SLC27A1-209ENST00000600297 PI4KAP2A4QPH2 592 aa29.67■■■□□ 2.34
SLC27A1-209ENST00000600297 GLTPD2A6NH11 291 aa29.67■■■□□ 2.34
SLC27A1-209ENST00000600297 ATP5J2-PTCD1G3V325 749 aa29.67■■■□□ 2.34
SLC27A1-209ENST00000600297 FLIIQ13045 1269 aa29.67■■■□□ 2.34
SLC27A1-209ENST00000600297 G2E3Q7L622 706 aa29.67■■■□□ 2.34
SLC27A1-209ENST00000600297 TRMT2AQ8IZ69 625 aaKnown RBP29.67■■■□□ 2.34
SLC27A1-209ENST00000600297 PI4KAP1Q8N8J0 262 aa29.67■■■□□ 2.34
SLC27A1-209ENST00000600297 RBM46Q8TBY0 533 aaKnown RBP29.67■■■□□ 2.34
SLC27A1-209ENST00000600297 MAP3K2Q9Y2U5 619 aa29.67■■■□□ 2.34
SLC27A1-209ENST00000600297 CCDC93Q567U6 631 aa29.66■■■□□ 2.34
SLC27A1-209ENST00000600297 CCDC191Q8NCU4 936 aa29.66■■■□□ 2.34
SLC27A1-209ENST00000600297 MYD88Q99836 296 aa29.66■■■□□ 2.34
SLC27A1-209ENST00000600297 HOXA10P31260 410 aaPredicted RBP29.65■■■□□ 2.34
SLC27A1-209ENST00000600297 ZNF428Q96B54 188 aa29.65■■■□□ 2.34
SLC27A1-209ENST00000600297 CDCA7LQ96GN5 454 aa29.65■■■□□ 2.34
SLC27A1-209ENST00000600297 NEXNQ0ZGT2 675 aa29.64■■■□□ 2.34
SLC27A1-209ENST00000600297 RPGRQ92834 1020 aaKnown RBP29.64■■■□□ 2.34
SLC27A1-209ENST00000600297 WDR90Q96KV7 1748 aa29.64■■■□□ 2.34
SLC27A1-209ENST00000600297 FKBP5Q13451 457 aaPredicted RBP29.63■■■□□ 2.33
SLC27A1-209ENST00000600297 DPY19L2Q6NUT2 758 aa29.63■■■□□ 2.33
SLC27A1-209ENST00000600297 HSP90B1P14625 803 aaKnown RBP29.62■■■□□ 2.33
SLC27A1-209ENST00000600297 LAMB2P55268 1798 aa29.62■■■□□ 2.33
SLC27A1-209ENST00000600297 ZBTB38Q8NAP3 1195 aaPredicted RBP29.61■■■□□ 2.33
SLC27A1-209ENST00000600297 C7orf43Q8WVR3 580 aa29.61■■■□□ 2.33
SLC27A1-209ENST00000600297 RBM17Q96I25 401 aaKnown RBP29.61■■■□□ 2.33
SLC27A1-209ENST00000600297 CRAMP1Q96RY5 1269 aa29.61■■■□□ 2.33
SLC27A1-209ENST00000600297 CWC25Q9NXE8 425 aaPredicted RBP29.61■■■□□ 2.33
SLC27A1-209ENST00000600297 CT47B1P0C2W7 299 aaPredicted RBP29.6■■■□□ 2.33
SLC27A1-209ENST00000600297 FAM89AQ96GI7 184 aa29.6■■■□□ 2.33
SLC27A1-209ENST00000600297 DDX60Q8IY21 1712 aaKnown RBP29.59■■■□□ 2.33
SLC27A1-209ENST00000600297 HCLS1P14317 486 aaPredicted RBP29.59■■■□□ 2.33
SLC27A1-209ENST00000600297 VEGFAP15692 232 aaPredicted RBP29.59■■■□□ 2.33
SLC27A1-209ENST00000600297 APLP1P51693 650 aa29.59■■■□□ 2.33
SLC27A1-209ENST00000600297 SYNE4Q8N205 404 aa29.59■■■□□ 2.33
SLC27A1-209ENST00000600297 HNRNPUQ00839 825 aaKnown RBP eCLIP29.58■■■□□ 2.33
SLC27A1-209ENST00000600297 FSTL1Q12841 308 aa29.58■■■□□ 2.33
SLC27A1-209ENST00000600297 DNAAF4Q8WXU2 420 aa29.58■■■□□ 2.33
SLC27A1-209ENST00000600297 PCCAP05165 728 aaPredicted RBP29.57■■■□□ 2.32
SLC27A1-209ENST00000600297 FKBP4Q02790 459 aaKnown RBP eCLIP29.57■■■□□ 2.32
SLC27A1-209ENST00000600297 C3orf67Q6ZVT6 689 aa29.57■■■□□ 2.32
SLC27A1-209ENST00000600297 RTKN2Q8IZC4 609 aa29.57■■■□□ 2.32
SLC27A1-209ENST00000600297 IGKV5-2P06315 115 aa29.56■■■□□ 2.32
SLC27A1-209ENST00000600297 OLFM4Q6UX06 510 aa29.56■■■□□ 2.32
SLC27A1-209ENST00000600297 IRS4O14654 1257 aaPredicted RBP29.55■■■□□ 2.32
SLC27A1-209ENST00000600297 CC2D2BQ6DHV5 1058 aa29.55■■■□□ 2.32
SLC27A1-209ENST00000600297 SMC1BQ8NDV3 1235 aa29.55■■■□□ 2.32
SLC27A1-209ENST00000600297 SF3B3Q15393 1217 aaKnown RBP29.54■■■□□ 2.32
SLC27A1-209ENST00000600297 ALDH1L2Q3SY69 923 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms