RNA–Protein interactions for RNA: ENST00000599712.1

SAMD4B-209, Transcript of sterile alpha motif domain containing 4B, humanhuman

TSL 4

Gene SAMD4B, Length 925 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-209ENST00000599712 ANKRD36CQ5JPF3 1778 aa16.73■□□□□ 0.27
SAMD4B-209ENST00000599712 LTBP3Q9NS15 1303 aa16.72■□□□□ 0.27
SAMD4B-209ENST00000599712 TNRC6CQ9HCJ0 1690 aaKnown RBP16.72■□□□□ 0.27
SAMD4B-209ENST00000599712 FER1L6Q2WGJ9 1857 aa16.72■□□□□ 0.27
SAMD4B-209ENST00000599712 LMNB1P20700 586 aa16.72■□□□□ 0.27
SAMD4B-209ENST00000599712 ALDH1B1P30837 517 aa16.72■□□□□ 0.27
SAMD4B-209ENST00000599712 HOXA10P31260 410 aaPredicted RBP16.72■□□□□ 0.27
SAMD4B-209ENST00000599712 SOGA3Q5TF21 947 aa16.72■□□□□ 0.27
SAMD4B-209ENST00000599712 CCDC30Q5VVM6 783 aa16.72■□□□□ 0.27
SAMD4B-209ENST00000599712 ISCA1Q9BUE6 129 aa16.72■□□□□ 0.27
SAMD4B-209ENST00000599712 RNF181Q9P0P0 153 aa16.72■□□□□ 0.27
SAMD4B-209ENST00000599712 TRIM28Q13263 835 aaKnown RBP16.71■□□□□ 0.27
SAMD4B-209ENST00000599712 ZC3H4Q9UPT8 1303 aaKnown RBP16.7■□□□□ 0.26
SAMD4B-209ENST00000599712 ZNF526Q8TF50 670 aaPredicted RBP16.7■□□□□ 0.26
SAMD4B-209ENST00000599712 PHAXQ9H814 394 aaKnown RBP16.7■□□□□ 0.26
SAMD4B-209ENST00000599712 ZNF219Q9P2Y4 722 aaPredicted RBP16.7■□□□□ 0.26
SAMD4B-209ENST00000599712 SALL2Q9Y467 1007 aaPredicted RBP16.7■□□□□ 0.26
SAMD4B-209ENST00000599712 FANCIQ9NVI1 1328 aa16.7■□□□□ 0.26
SAMD4B-209ENST00000599712 CACNA1SQ13698 1873 aa16.69■□□□□ 0.26
SAMD4B-209ENST00000599712 C1QTNF8P60827 252 aa16.69■□□□□ 0.26
SAMD4B-209ENST00000599712 TWISTNBQ3B726 338 aaPredicted RBP16.69■□□□□ 0.26
SAMD4B-209ENST00000599712 C3orf67Q6ZVT6 689 aa16.69■□□□□ 0.26
SAMD4B-209ENST00000599712 CRAMP1Q96RY5 1269 aa16.69■□□□□ 0.26
SAMD4B-209ENST00000599712 GOLGA2Q08379 1002 aa16.68■□□□□ 0.26
SAMD4B-209ENST00000599712 NLRP3Q96P20 1036 aa16.68■□□□□ 0.26
SAMD4B-209ENST00000599712 TAOK3Q9H2K8 898 aa16.68■□□□□ 0.26
SAMD4B-209ENST00000599712 SPINK5Q9NQ38 1064 aaPredicted RBP16.68■□□□□ 0.26
SAMD4B-209ENST00000599712 TRMT112Q9UI30 125 aaKnown RBP16.68■□□□□ 0.26
SAMD4B-209ENST00000599712 ZNF521Q96K83 1311 aa16.68■□□□□ 0.26
SAMD4B-209ENST00000599712 CCDC88AQ3V6T2 1871 aa16.67■□□□□ 0.26
SAMD4B-209ENST00000599712 CCER2I3L3R5 266 aa16.67■□□□□ 0.26
SAMD4B-209ENST00000599712 KIF3CO14782 793 aa16.67■□□□□ 0.26
SAMD4B-209ENST00000599712 CCDC93Q567U6 631 aa16.67■□□□□ 0.26
SAMD4B-209ENST00000599712 RIC3Q7Z5B4 369 aa16.67■□□□□ 0.26
SAMD4B-209ENST00000599712 SYNE4Q8N205 404 aa16.67■□□□□ 0.26
SAMD4B-209ENST00000599712 RPGRQ92834 1020 aaKnown RBP16.67■□□□□ 0.26
SAMD4B-209ENST00000599712 RBM17Q96I25 401 aaKnown RBP16.67■□□□□ 0.26
SAMD4B-209ENST00000599712 SH3TC1Q8TE82 1336 aa16.67■□□□□ 0.26
SAMD4B-209ENST00000599712 ATP5J2-PTCD1G3V325 749 aa16.66■□□□□ 0.26
SAMD4B-209ENST00000599712 VAMP4O75379 141 aa16.66■□□□□ 0.26
SAMD4B-209ENST00000599712 RTKN2Q8IZC4 609 aa16.66■□□□□ 0.26
SAMD4B-209ENST00000599712 SNED1Q8TER0 1413 aa16.66■□□□□ 0.26
SAMD4B-209ENST00000599712 DICER1Q9UPY3 1922 aaKnown RBP16.65■□□□□ 0.26
SAMD4B-209ENST00000599712 DDX58O95786 925 aaKnown RBP16.65■□□□□ 0.26
SAMD4B-209ENST00000599712 HCLS1P14317 486 aaPredicted RBP16.65■□□□□ 0.26
SAMD4B-209ENST00000599712 CC2D2BQ6DHV5 1058 aa16.65■□□□□ 0.26
SAMD4B-209ENST00000599712 STK31Q9BXU1 1019 aa16.65■□□□□ 0.26
SAMD4B-209ENST00000599712 FKBP4Q02790 459 aaKnown RBP eCLIP16.64■□□□□ 0.25
SAMD4B-209ENST00000599712 EXOSC9Q06265 439 aaKnown RBP16.64■□□□□ 0.25
SAMD4B-209ENST00000599712 OLFM4Q6UX06 510 aa16.64■□□□□ 0.25
SAMD4B-209ENST00000599712 METTL22Q9BUU2 404 aaPredicted RBP16.64■□□□□ 0.25
SAMD4B-209ENST00000599712 MYH16Q9H6N6 1097 aa16.64■□□□□ 0.25
SAMD4B-209ENST00000599712 KDM2BQ8NHM5 1336 aa16.64■□□□□ 0.25
SAMD4B-209ENST00000599712 SLC4A2P04920 1241 aa16.63■□□□□ 0.25
SAMD4B-209ENST00000599712 GRIPAP1Q4V328 841 aa16.63■□□□□ 0.25
SAMD4B-209ENST00000599712 KSR2Q6VAB6 950 aa16.63■□□□□ 0.25
SAMD4B-209ENST00000599712 CCDC191Q8NCU4 936 aa16.63■□□□□ 0.25
SAMD4B-209ENST00000599712 FAM89AQ96GI7 184 aa16.63■□□□□ 0.25
SAMD4B-209ENST00000599712 NMRK2Q9NPI5 230 aa16.63■□□□□ 0.25
SAMD4B-209ENST00000599712 CACNA1FO60840 1977 aa16.63■□□□□ 0.25
SAMD4B-209ENST00000599712 LAMB2P55268 1798 aa16.63■□□□□ 0.25
SAMD4B-209ENST00000599712 PI4KAP2A4QPH2 592 aa16.62■□□□□ 0.25
SAMD4B-209ENST00000599712 GLTPD2A6NH11 291 aa16.62■□□□□ 0.25
SAMD4B-209ENST00000599712 TCERG1O14776 1098 aaKnown RBP16.62■□□□□ 0.25
SAMD4B-209ENST00000599712 G2E3Q7L622 706 aa16.62■□□□□ 0.25
SAMD4B-209ENST00000599712 PI4KAP1Q8N8J0 262 aa16.62■□□□□ 0.25
SAMD4B-209ENST00000599712 ZBTB38Q8NAP3 1195 aaPredicted RBP16.62■□□□□ 0.25
SAMD4B-209ENST00000599712 PSMD1Q99460 953 aa16.62■□□□□ 0.25
SAMD4B-209ENST00000599712 MYD88Q99836 296 aa16.62■□□□□ 0.25
SAMD4B-209ENST00000599712 MAP3K2Q9Y2U5 619 aa16.62■□□□□ 0.25
SAMD4B-209ENST00000599712 ABCC4O15439 1325 aa16.62■□□□□ 0.25
SAMD4B-209ENST00000599712 TIAM2Q8IVF5 1701 aa16.62■□□□□ 0.25
SAMD4B-209ENST00000599712 PPEF1O14829 653 aaPredicted RBP16.61■□□□□ 0.25
SAMD4B-209ENST00000599712 BBOX1O75936 387 aa16.61■□□□□ 0.25
SAMD4B-209ENST00000599712 SF3B3Q15393 1217 aaKnown RBP16.61■□□□□ 0.25
SAMD4B-209ENST00000599712 ZNF428Q96B54 188 aa16.61■□□□□ 0.25
SAMD4B-209ENST00000599712 DDX60Q8IY21 1712 aaKnown RBP16.61■□□□□ 0.25
SAMD4B-209ENST00000599712 ZNF277Q9NRM2 450 aaPredicted RBP16.6■□□□□ 0.25
SAMD4B-209ENST00000599712 CWC25Q9NXE8 425 aaPredicted RBP16.6■□□□□ 0.25
SAMD4B-209ENST00000599712 ATP6V0A2Q9Y487 856 aa16.6■□□□□ 0.25
SAMD4B-209ENST00000599712 IRS4O14654 1257 aaPredicted RBP16.59■□□□□ 0.25
SAMD4B-209ENST00000599712 TOMM70O94826 608 aa16.59■□□□□ 0.25
SAMD4B-209ENST00000599712 PCCAP05165 728 aaPredicted RBP16.59■□□□□ 0.25
SAMD4B-209ENST00000599712 IGKV5-2P06315 115 aa16.59■□□□□ 0.25
SAMD4B-209ENST00000599712 FLIIQ13045 1269 aa16.59■□□□□ 0.25
SAMD4B-209ENST00000599712 DDX46Q7L014 1031 aaKnown RBP16.59■□□□□ 0.25
SAMD4B-209ENST00000599712 HSP90B1P14625 803 aaKnown RBP16.58■□□□□ 0.24
SAMD4B-209ENST00000599712 IARSP41252 1262 aaKnown RBP16.58■□□□□ 0.24
SAMD4B-209ENST00000599712 GRAPQ13588 217 aa16.58■□□□□ 0.24
SAMD4B-209ENST00000599712 DPY19L2Q6NUT2 758 aa16.58■□□□□ 0.24
SAMD4B-209ENST00000599712 SLC51AQ86UW1 340 aa16.58■□□□□ 0.24
SAMD4B-209ENST00000599712 SP8Q8IXZ3 490 aa16.58■□□□□ 0.24
SAMD4B-209ENST00000599712 GRAPLQ8TC17 118 aaPredicted RBP16.58■□□□□ 0.24
SAMD4B-209ENST00000599712 RRAGCQ9HB90 399 aa16.58■□□□□ 0.24
SAMD4B-209ENST00000599712 RTL5Q5HYW3 569 aaPredicted RBP16.57■□□□□ 0.24
SAMD4B-209ENST00000599712 POTECB2RU33 542 aa16.56■□□□□ 0.24
SAMD4B-209ENST00000599712 E9PSI1 815 aa16.56■□□□□ 0.24
SAMD4B-209ENST00000599712 NEXNQ0ZGT2 675 aa16.56■□□□□ 0.24
SAMD4B-209ENST00000599712 TMC4Q7Z404 712 aa16.56■□□□□ 0.24
SAMD4B-209ENST00000599712 RTFDC1Q9BY42 306 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms