RNA–Protein interactions for RNA: ENST00000598959.5

NOP53-208, Transcript of NOP53 ribosome biogenesis factor, human

TSL 5

Gene NOP53, Length 501 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NOP53-208	ENST00000598959	ALDH1B1	P30837	517 aa		13.89	□□□□□ -0.19
NOP53-208	ENST00000598959	EPHX2	P34913	555 aa		13.89	□□□□□ -0.19
NOP53-208	ENST00000598959	VEGFB	P49765	207 aa		13.89	□□□□□ -0.19
NOP53-208	ENST00000598959	SCNN1D	P51172	638 aa		13.89	□□□□□ -0.19
NOP53-208	ENST00000598959	NUTM1	Q86Y26	1132 aa		13.89	□□□□□ -0.19
NOP53-208	ENST00000598959	GPC2	Q8N158	579 aa		13.89	□□□□□ -0.19
NOP53-208	ENST00000598959	HACL1	Q9UJ83	578 aa		13.89	□□□□□ -0.19
NOP53-208	ENST00000598959	TMEM88B	A6NKF7	163 aa		13.88	□□□□□ -0.19
NOP53-208	ENST00000598959	NFE2L2	Q16236	605 aa		13.88	□□□□□ -0.19
NOP53-208	ENST00000598959	SUSD4	Q5VX71	490 aa		13.88	□□□□□ -0.19
NOP53-208	ENST00000598959	NPM2	Q86SE8	214 aa	Known RBP	13.88	□□□□□ -0.19
NOP53-208	ENST00000598959	THUMPD2	Q9BTF0	503 aa	Known RBP	13.88	□□□□□ -0.19
NOP53-208	ENST00000598959	PRDM10	Q9NQV6	1147 aa		13.88	□□□□□ -0.19
NOP53-208	ENST00000598959	WBP1L	Q9NX94	342 aa		13.88	□□□□□ -0.19
NOP53-208	ENST00000598959	NPHP1	O15259	732 aa		13.87	□□□□□ -0.19
NOP53-208	ENST00000598959	CC2D2B	Q6DHV5	1058 aa		13.87	□□□□□ -0.19
NOP53-208	ENST00000598959	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.87	□□□□□ -0.19
NOP53-208	ENST00000598959	PNISR	Q8TF01	805 aa	Known RBP	13.87	□□□□□ -0.19
NOP53-208	ENST00000598959	CRAMP1	Q96RY5	1269 aa		13.87	□□□□□ -0.19
NOP53-208	ENST00000598959	NYX	Q9GZU5	481 aa		13.87	□□□□□ -0.19
NOP53-208	ENST00000598959	FAM177B	A6PVY3	158 aa		13.86	□□□□□ -0.19
NOP53-208	ENST00000598959	TNRC18	O15417	2968 aa	Predicted RBP	13.86	□□□□□ -0.19
NOP53-208	ENST00000598959	CAPN15	O75808	1086 aa		13.85	□□□□□ -0.19
NOP53-208	ENST00000598959	SLC10A5	Q5PT55	438 aa		13.85	□□□□□ -0.19
NOP53-208	ENST00000598959	MAP1S	Q66K74	1059 aa	Predicted RBP	13.85	□□□□□ -0.19
NOP53-208	ENST00000598959	PNMA8A	Q86V59	439 aa	Predicted RBP	13.85	□□□□□ -0.19
NOP53-208	ENST00000598959	CNTROB	Q8N137	903 aa		13.85	□□□□□ -0.19
NOP53-208	ENST00000598959	PROSER3	Q2NL68	480 aa		13.84	□□□□□ -0.19
NOP53-208	ENST00000598959	GRIPAP1	Q4V328	841 aa		13.84	□□□□□ -0.19
NOP53-208	ENST00000598959	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.84	□□□□□ -0.19
NOP53-208	ENST00000598959	ZBTB3	Q9H5J0	574 aa		13.84	□□□□□ -0.19
NOP53-208	ENST00000598959	HSPA8	P11142	646 aa	Known RBP	13.83	□□□□□ -0.2
NOP53-208	ENST00000598959	GPT	P24298	496 aa		13.83	□□□□□ -0.2
NOP53-208	ENST00000598959	EPS15	P42566	896 aa		13.83	□□□□□ -0.2
NOP53-208	ENST00000598959	FMR1	Q06787	632 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
NOP53-208	ENST00000598959	EAPP	Q56P03	285 aa	Predicted RBP	13.83	□□□□□ -0.2
NOP53-208	ENST00000598959	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
NOP53-208	ENST00000598959	ZNF646	O15015	1829 aa	Predicted RBP	13.83	□□□□□ -0.2
NOP53-208	ENST00000598959	PSME4	Q14997	1843 aa		13.83	□□□□□ -0.2
NOP53-208	ENST00000598959	SCN9A	Q15858	1988 aa		13.82	□□□□□ -0.2
NOP53-208	ENST00000598959	PPEF1	O14829	653 aa	Predicted RBP	13.82	□□□□□ -0.2
NOP53-208	ENST00000598959	MYL6B	P14649	208 aa		13.82	□□□□□ -0.2
NOP53-208	ENST00000598959	CST9	Q5W186	159 aa		13.82	□□□□□ -0.2
NOP53-208	ENST00000598959	KIF6	Q6ZMV9	814 aa		13.82	□□□□□ -0.2
NOP53-208	ENST00000598959	RRP7A	Q9Y3A4	280 aa	Known RBP	13.82	□□□□□ -0.2
NOP53-208	ENST00000598959	ABCC4	O15439	1325 aa		13.82	□□□□□ -0.2
NOP53-208	ENST00000598959	CTCF	P49711	727 aa	Predicted RBP	13.81	□□□□□ -0.2
NOP53-208	ENST00000598959	PARP10	Q53GL7	1025 aa		13.81	□□□□□ -0.2
NOP53-208	ENST00000598959	NGEF	Q8N5V2	710 aa		13.81	□□□□□ -0.2
NOP53-208	ENST00000598959	VPS33B	Q9H267	617 aa		13.81	□□□□□ -0.2
NOP53-208	ENST00000598959	BABAM1	Q9NWV8	329 aa		13.81	□□□□□ -0.2
NOP53-208	ENST00000598959	ATP6V0A2	Q9Y487	856 aa		13.81	□□□□□ -0.2
NOP53-208	ENST00000598959	JDP2	Q8WYK2	163 aa		13.8	□□□□□ -0.2
NOP53-208	ENST00000598959	RPGR	Q92834	1020 aa	Known RBP	13.8	□□□□□ -0.2
NOP53-208	ENST00000598959	PGAP2	Q9UHJ9	254 aa		13.8	□□□□□ -0.2
NOP53-208	ENST00000598959	WDR33	Q9C0J8	1336 aa	Known RBP	13.8	□□□□□ -0.2
NOP53-208	ENST00000598959	DEFB115	Q30KQ5	88 aa		13.79	□□□□□ -0.2
NOP53-208	ENST00000598959	USP50	Q70EL3	339 aa	Predicted RBP	13.79	□□□□□ -0.2
NOP53-208	ENST00000598959	NLRP10	Q86W26	655 aa		13.79	□□□□□ -0.2
NOP53-208	ENST00000598959	RBM17	Q96I25	401 aa	Known RBP	13.79	□□□□□ -0.2
NOP53-208	ENST00000598959	GPRC5D	Q9NZD1	345 aa		13.79	□□□□□ -0.2
NOP53-208	ENST00000598959	POLR2A	P24928	1970 aa	Known RBP	13.79	□□□□□ -0.2
NOP53-208	ENST00000598959	ANXA1	P04083	346 aa		13.78	□□□□□ -0.2
NOP53-208	ENST00000598959	GTF2E1	P29083	439 aa	Predicted RBP	13.78	□□□□□ -0.2
NOP53-208	ENST00000598959	LBX1	P52954	281 aa		13.78	□□□□□ -0.2
NOP53-208	ENST00000598959	EIF6	P56537	245 aa	Known RBP	13.78	□□□□□ -0.2
NOP53-208	ENST00000598959	CXCL9	Q07325	125 aa		13.78	□□□□□ -0.2
NOP53-208	ENST00000598959	AOC3	Q16853	763 aa		13.78	□□□□□ -0.2
NOP53-208	ENST00000598959	LARGE2	Q8N3Y3	721 aa		13.78	□□□□□ -0.2
NOP53-208	ENST00000598959	CDHR2	Q9BYE9	1310 aa		13.78	□□□□□ -0.2
NOP53-208	ENST00000598959	TRAF5	O00463	557 aa		13.77	□□□□□ -0.21
NOP53-208	ENST00000598959	KIAA2012	Q0VF49	1180 aa		13.77	□□□□□ -0.21
NOP53-208	ENST00000598959	PPP1R42	Q7Z4L9	355 aa		13.77	□□□□□ -0.21
NOP53-208	ENST00000598959	TSPYL4	Q9UJ04	414 aa		13.77	□□□□□ -0.21
NOP53-208	ENST00000598959	CLEC11A	Q9Y240	323 aa		13.77	□□□□□ -0.21
NOP53-208	ENST00000598959	GJA3	Q9Y6H8	435 aa		13.77	□□□□□ -0.21
NOP53-208	ENST00000598959	TLL2	Q9Y6L7	1015 aa		13.77	□□□□□ -0.21
NOP53-208	ENST00000598959	YDJC	A8MPS7	323 aa		13.76	□□□□□ -0.21
NOP53-208	ENST00000598959	PPIP5K2	O43314	1243 aa		13.76	□□□□□ -0.21
NOP53-208	ENST00000598959	TMPO	P42166	694 aa	Known RBP	13.76	□□□□□ -0.21
NOP53-208	ENST00000598959	HIRA	P54198	1017 aa	Predicted RBP	13.76	□□□□□ -0.21
NOP53-208	ENST00000598959	SP8	Q8IXZ3	490 aa		13.76	□□□□□ -0.21
NOP53-208	ENST00000598959	NIM1K	Q8IY84	436 aa		13.76	□□□□□ -0.21
NOP53-208	ENST00000598959	CAPNS2	Q96L46	248 aa		13.76	□□□□□ -0.21
NOP53-208	ENST00000598959	NLRP3	Q96P20	1036 aa		13.76	□□□□□ -0.21
NOP53-208	ENST00000598959	UTP14A	Q9BVJ6	771 aa	Known RBP	13.76	□□□□□ -0.21
NOP53-208	ENST00000598959	ADARB2	Q9NS39	739 aa	Known RBP	13.76	□□□□□ -0.21
NOP53-208	ENST00000598959	CASP8AP2	Q9UKL3	1982 aa		13.75	□□□□□ -0.21
NOP53-208	ENST00000598959	CHL1	O00533	1208 aa		13.75	□□□□□ -0.21
NOP53-208	ENST00000598959	LMOD1	P29536	600 aa	Predicted RBP	13.75	□□□□□ -0.21
NOP53-208	ENST00000598959	KRT24	Q2M2I5	525 aa		13.75	□□□□□ -0.21
NOP53-208	ENST00000598959	ZNRF3	Q9ULT6	936 aa		13.75	□□□□□ -0.21
NOP53-208	ENST00000598959	TRIM35	Q9UPQ4	493 aa		13.75	□□□□□ -0.21
NOP53-208	ENST00000598959	ZNF609	O15014	1411 aa		13.74	□□□□□ -0.21
NOP53-208	ENST00000598959	MAPK8IP3	Q9UPT6	1336 aa		13.74	□□□□□ -0.21
NOP53-208	ENST00000598959	BBOX1	O75936	387 aa		13.74	□□□□□ -0.21
NOP53-208	ENST00000598959	GMPS	P49915	693 aa	Predicted RBP	13.74	□□□□□ -0.21
NOP53-208	ENST00000598959	MAP2K1	Q02750	393 aa	Predicted RBP	13.74	□□□□□ -0.21
NOP53-208	ENST00000598959	TCIRG1	Q13488	830 aa		13.74	□□□□□ -0.21
NOP53-208	ENST00000598959	CYP4F22	Q6NT55	531 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 238.7 ms