RNA–Protein interactions for RNA: ENST00000596386.1

PSMC4-204, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 2

Gene PSMC4, Length 929 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-204ENST00000596386 PSMD1Q99460 953 aa20.57■□□□□ 0.88
PSMC4-204ENST00000596386 ZNF541Q9H0D2 1346 aa20.56■□□□□ 0.88
PSMC4-204ENST00000596386 POTEIP0CG38 1075 aa20.56■□□□□ 0.88
PSMC4-204ENST00000596386 POTEJP0CG39 1038 aa20.56■□□□□ 0.88
PSMC4-204ENST00000596386 CC2D2BQ6DHV5 1058 aa20.56■□□□□ 0.88
PSMC4-204ENST00000596386 PPP1R42Q7Z4L9 355 aa20.56■□□□□ 0.88
PSMC4-204ENST00000596386 SYNE4Q8N205 404 aa20.56■□□□□ 0.88
PSMC4-204ENST00000596386 ANXA1P04083 346 aa20.55■□□□□ 0.88
PSMC4-204ENST00000596386 WDR43Q15061 677 aaKnown RBP eCLIP20.55■□□□□ 0.88
PSMC4-204ENST00000596386 NEUROD2Q15784 382 aa20.55■□□□□ 0.88
PSMC4-204ENST00000596386 RUNDC1Q96C34 613 aa20.55■□□□□ 0.88
PSMC4-204ENST00000596386 ANKRD36CQ5JPF3 1778 aa20.54■□□□□ 0.88
PSMC4-204ENST00000596386 FZD9O00144 591 aa20.54■□□□□ 0.88
PSMC4-204ENST00000596386 CHL1O00533 1208 aa20.54■□□□□ 0.88
PSMC4-204ENST00000596386 CRAMP1Q96RY5 1269 aa20.54■□□□□ 0.88
PSMC4-204ENST00000596386 TAF1DQ9H5J8 278 aaPredicted RBP20.54■□□□□ 0.88
PSMC4-204ENST00000596386 TRIM35Q9UPQ4 493 aa20.54■□□□□ 0.88
PSMC4-204ENST00000596386 C3orf67Q6ZVT6 689 aa20.53■□□□□ 0.88
PSMC4-204ENST00000596386 NECTIN2Q92692 538 aa20.53■□□□□ 0.88
PSMC4-204ENST00000596386 RBM17Q96I25 401 aaKnown RBP20.53■□□□□ 0.88
PSMC4-204ENST00000596386 RNF123Q5XPI4 1314 aa20.53■□□□□ 0.88
PSMC4-204ENST00000596386 GRIPAP1Q4V328 841 aa20.52■□□□□ 0.88
PSMC4-204ENST00000596386 COPS6Q7L5N1 327 aa20.52■□□□□ 0.88
PSMC4-204ENST00000596386 LDHDQ86WU2 507 aa20.52■□□□□ 0.88
PSMC4-204ENST00000596386 UTP14AQ9BVJ6 771 aaKnown RBP20.52■□□□□ 0.88
PSMC4-204ENST00000596386 PPEF1O14829 653 aaPredicted RBP20.51■□□□□ 0.87
PSMC4-204ENST00000596386 KRT24Q2M2I5 525 aa20.51■□□□□ 0.87
PSMC4-204ENST00000596386 HSP90AB3PQ58FF7 597 aa20.51■□□□□ 0.87
PSMC4-204ENST00000596386 XAGE3Q8WTP9 111 aa20.51■□□□□ 0.87
PSMC4-204ENST00000596386 JDP2Q8WYK2 163 aa20.51■□□□□ 0.87
PSMC4-204ENST00000596386 NLRP3Q96P20 1036 aa20.51■□□□□ 0.87
PSMC4-204ENST00000596386 DDX21Q9NR30 783 aaKnown RBP eCLIP20.51■□□□□ 0.87
PSMC4-204ENST00000596386 ADAMTS8Q9UP79 889 aa20.51■□□□□ 0.87
PSMC4-204ENST00000596386 COL4A5P29400 1685 aa20.51■□□□□ 0.87
PSMC4-204ENST00000596386 AIMP1Q12904 312 aaKnown RBP20.5■□□□□ 0.87
PSMC4-204ENST00000596386 SLC10A5Q5PT55 438 aa20.5■□□□□ 0.87
PSMC4-204ENST00000596386 GPC2Q8N158 579 aa20.5■□□□□ 0.87
PSMC4-204ENST00000596386 CREBZFQ9NS37 354 aa20.5■□□□□ 0.87
PSMC4-204ENST00000596386 HACL1Q9UJ83 578 aa20.5■□□□□ 0.87
PSMC4-204ENST00000596386 ADAMTSL1Q8N6G6 1762 aa20.49■□□□□ 0.87
PSMC4-204ENST00000596386 SLC51AQ86UW1 340 aa20.49■□□□□ 0.87
PSMC4-204ENST00000596386 NLRP10Q86W26 655 aa20.49■□□□□ 0.87
PSMC4-204ENST00000596386 LAS1LQ9Y4W2 734 aaKnown RBP20.49■□□□□ 0.87
PSMC4-204ENST00000596386 HOXB7P09629 217 aa20.48■□□□□ 0.87
PSMC4-204ENST00000596386 PRKRIP1Q9H875 184 aaPredicted RBP20.48■□□□□ 0.87
PSMC4-204ENST00000596386 CHPF2Q9P2E5 772 aa20.48■□□□□ 0.87
PSMC4-204ENST00000596386 PASKQ96RG2 1323 aa20.48■□□□□ 0.87
PSMC4-204ENST00000596386 LAMB2P55268 1798 aa20.47■□□□□ 0.87
PSMC4-204ENST00000596386 EPHX2P34913 555 aa20.47■□□□□ 0.87
PSMC4-204ENST00000596386 TCIRG1Q13488 830 aa20.47■□□□□ 0.87
PSMC4-204ENST00000596386 EAPPQ56P03 285 aaPredicted RBP20.47■□□□□ 0.87
PSMC4-204ENST00000596386 HDGFL1Q5TGJ6 251 aa20.47■□□□□ 0.87
PSMC4-204ENST00000596386 ABCC4O15439 1325 aa20.47■□□□□ 0.87
PSMC4-204ENST00000596386 TCERG1O14776 1098 aaKnown RBP20.46■□□□□ 0.87
PSMC4-204ENST00000596386 EIF6P56537 245 aaKnown RBP20.46■□□□□ 0.87
PSMC4-204ENST00000596386 PNMA8AQ86V59 439 aaPredicted RBP20.46■□□□□ 0.87
PSMC4-204ENST00000596386 LARGE2Q8N3Y3 721 aa20.46■□□□□ 0.87
PSMC4-204ENST00000596386 CFAP44Q96MT7 982 aa20.46■□□□□ 0.87
PSMC4-204ENST00000596386 ATP6V0A2Q9Y487 856 aa20.46■□□□□ 0.87
PSMC4-204ENST00000596386 TMX4Q9H1E5 349 aaPredicted RBP20.45■□□□□ 0.86
PSMC4-204ENST00000596386 TRMT112Q9UI30 125 aaKnown RBP20.45■□□□□ 0.86
PSMC4-204ENST00000596386 ITGBL1O95965 494 aaPredicted RBP20.44■□□□□ 0.86
PSMC4-204ENST00000596386 HCLS1P14317 486 aaPredicted RBP20.44■□□□□ 0.86
PSMC4-204ENST00000596386 DBF4Q9UBU7 674 aaPredicted RBP20.44■□□□□ 0.86
PSMC4-204ENST00000596386 SH3TC1Q8TE82 1336 aa20.44■□□□□ 0.86
PSMC4-204ENST00000596386 HSPA1AP0DMV8 641 aaKnown RBP20.43■□□□□ 0.86
PSMC4-204ENST00000596386 HSPA1BP0DMV9 641 aaKnown RBP20.43■□□□□ 0.86
PSMC4-204ENST00000596386 PLBD2Q8NHP8 589 aa20.43■□□□□ 0.86
PSMC4-204ENST00000596386 CLEC11AQ9Y240 323 aa20.43■□□□□ 0.86
PSMC4-204ENST00000596386 GJA3Q9Y6H8 435 aa20.43■□□□□ 0.86
PSMC4-204ENST00000596386 LTBP1Q14766 1721 aa20.42■□□□□ 0.86
PSMC4-204ENST00000596386 PPIP5K2O43314 1243 aa20.42■□□□□ 0.86
PSMC4-204ENST00000596386 BBOX1O75936 387 aa20.42■□□□□ 0.86
PSMC4-204ENST00000596386 COL13A1Q5TAT6 717 aaPredicted RBP20.42■□□□□ 0.86
PSMC4-204ENST00000596386 NIM1KQ8IY84 436 aa20.42■□□□□ 0.86
PSMC4-204ENST00000596386 VPS33BQ9H267 617 aa20.42■□□□□ 0.86
PSMC4-204ENST00000596386 MBIPQ9NS73 344 aa20.42■□□□□ 0.86
PSMC4-204ENST00000596386 MKRN1Q9UHC7 482 aaKnown RBP20.42■□□□□ 0.86
PSMC4-204ENST00000596386 LMOD1P29536 600 aaPredicted RBP20.41■□□□□ 0.86
PSMC4-204ENST00000596386 SCNN1DP51172 638 aa20.41■□□□□ 0.86
PSMC4-204ENST00000596386 DUSP27Q5VZP5 1158 aa20.41■□□□□ 0.86
PSMC4-204ENST00000596386 ANKRD13DQ6ZTN6 518 aa20.41■□□□□ 0.86
PSMC4-204ENST00000596386 DDX46Q7L014 1031 aaKnown RBP20.41■□□□□ 0.86
PSMC4-204ENST00000596386 RTFDC1Q9BY42 306 aaPredicted RBP20.41■□□□□ 0.86
PSMC4-204ENST00000596386 CNTNAP1P78357 1384 aa20.41■□□□□ 0.86
PSMC4-204ENST00000596386 TMEM88BA6NKF7 163 aa20.4■□□□□ 0.86
PSMC4-204ENST00000596386 ZNF853P0CG23 659 aa20.4■□□□□ 0.86
PSMC4-204ENST00000596386 AOC3Q16853 763 aa20.4■□□□□ 0.86
PSMC4-204ENST00000596386 SP8Q8IXZ3 490 aa20.4■□□□□ 0.86
PSMC4-204ENST00000596386 DDX60Q8IY21 1712 aaKnown RBP20.4■□□□□ 0.86
PSMC4-204ENST00000596386 SUPT20HQ8NEM7 779 aa20.4■□□□□ 0.86
PSMC4-204ENST00000596386 HYPKQ9NX55 129 aa20.4■□□□□ 0.86
PSMC4-204ENST00000596386 GRAPQ13588 217 aa20.39■□□□□ 0.85
PSMC4-204ENST00000596386 MAP1SQ66K74 1059 aaPredicted RBP20.39■□□□□ 0.85
PSMC4-204ENST00000596386 DPP8Q6V1X1 898 aaPredicted RBP20.39■□□□□ 0.85
PSMC4-204ENST00000596386 CNTROBQ8N137 903 aa20.39■□□□□ 0.85
PSMC4-204ENST00000596386 GRAPLQ8TC17 118 aaPredicted RBP20.39■□□□□ 0.85
PSMC4-204ENST00000596386 ISCA1Q9BUE6 129 aa20.39■□□□□ 0.85
PSMC4-204ENST00000596386 IFT57Q9NWB7 429 aa20.39■□□□□ 0.85
PSMC4-204ENST00000596386 APAF1O14727 1248 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms