RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 CASTP20810 708 aaKnown RBP27.39■■□□□ 1.97
SRRM1-222ENST00000596378 NBPF14Q5TI25 921 aa27.39■■□□□ 1.97
SRRM1-222ENST00000596378 NBPF10Q6P3W6 841 aaKnown RBP27.39■■□□□ 1.97
SRRM1-222ENST00000596378 NBPF15Q8N660 670 aa27.39■■□□□ 1.97
SRRM1-222ENST00000596378 A0A087WZG4 1122 aa27.38■■□□□ 1.97
SRRM1-222ENST00000596378 NMIQ13287 307 aaPredicted RBP27.38■■□□□ 1.97
SRRM1-222ENST00000596378 ADCK5Q3MIX3 580 aa27.38■■□□□ 1.97
SRRM1-222ENST00000596378 RFX5P48382 616 aaPredicted RBP27.38■■□□□ 1.97
SRRM1-222ENST00000596378 RUFY3Q7L099 469 aa27.38■■□□□ 1.97
SRRM1-222ENST00000596378 PCDH11XQ9BZA7 1347 aa27.37■■□□□ 1.97
SRRM1-222ENST00000596378 PCDH11YQ9BZA8 1340 aa27.37■■□□□ 1.97
SRRM1-222ENST00000596378 FOXD4L6Q3SYB3 417 aaPredicted RBP27.37■■□□□ 1.97
SRRM1-222ENST00000596378 FOXD4L3Q6VB84 417 aaPredicted RBP27.37■■□□□ 1.97
SRRM1-222ENST00000596378 DDX54Q8TDD1 881 aaKnown RBP27.37■■□□□ 1.97
SRRM1-222ENST00000596378 RBM27Q9P2N5 1060 aaKnown RBP27.37■■□□□ 1.97
SRRM1-222ENST00000596378 PTPN12Q05209 780 aaKnown RBP27.36■■□□□ 1.97
SRRM1-222ENST00000596378 COL5A2P05997 1499 aaPredicted RBP27.36■■□□□ 1.97
SRRM1-222ENST00000596378 PLBD2Q8NHP8 589 aa27.36■■□□□ 1.97
SRRM1-222ENST00000596378 EDC3Q96F86 508 aaKnown RBP27.36■■□□□ 1.97
SRRM1-222ENST00000596378 COPRSQ9NQ92 184 aa27.35■■□□□ 1.97
SRRM1-222ENST00000596378 SLAIN2Q9P270 581 aa27.35■■□□□ 1.97
SRRM1-222ENST00000596378 NSFL1CQ9UNZ2 370 aaKnown RBP27.35■■□□□ 1.97
SRRM1-222ENST00000596378 CCDC171Q6TFL3 1326 aa27.35■■□□□ 1.97
SRRM1-222ENST00000596378 A0A0D9SFI3 127 aa27.35■■□□□ 1.97
SRRM1-222ENST00000596378 TFCP2Q12800 502 aa27.35■■□□□ 1.97
SRRM1-222ENST00000596378 ZSCAN23Q3MJ62 389 aa27.35■■□□□ 1.97
SRRM1-222ENST00000596378 TTLL7Q6ZT98 887 aa27.35■■□□□ 1.97
SRRM1-222ENST00000596378 JAKMIP1Q96N16 626 aaKnown RBP27.35■■□□□ 1.97
SRRM1-222ENST00000596378 FSD1Q9BTV5 496 aa27.35■■□□□ 1.97
SRRM1-222ENST00000596378 RRAGDQ9NQL2 400 aaPredicted RBP27.35■■□□□ 1.97
SRRM1-222ENST00000596378 ZNF335Q9H4Z2 1342 aaPredicted RBP27.35■■□□□ 1.97
SRRM1-222ENST00000596378 STRN4Q9NRL3 753 aa27.34■■□□□ 1.97
SRRM1-222ENST00000596378 SOS2Q07890 1332 aaPredicted RBP27.34■■□□□ 1.97
SRRM1-222ENST00000596378 DTNBO60941 627 aa27.34■■□□□ 1.97
SRRM1-222ENST00000596378 LARGE1O95461 756 aa27.33■■□□□ 1.97
SRRM1-222ENST00000596378 RABL6Q3YEC7 729 aaPredicted RBP27.33■■□□□ 1.97
SRRM1-222ENST00000596378 NDUFB9Q9Y6M9 179 aa27.33■■□□□ 1.97
SRRM1-222ENST00000596378 A1BGP04217 495 aa27.33■■□□□ 1.97
SRRM1-222ENST00000596378 CASP7P55210 303 aa27.33■■□□□ 1.97
SRRM1-222ENST00000596378 DBNLQ9UJU6 430 aaKnown RBP27.33■■□□□ 1.97
SRRM1-222ENST00000596378 RBM8AQ9Y5S9 174 aaKnown RBP27.33■■□□□ 1.97
SRRM1-222ENST00000596378 NECTIN1Q15223 517 aa27.32■■□□□ 1.96
SRRM1-222ENST00000596378 LIMCH1Q9UPQ0 1083 aa27.32■■□□□ 1.96
SRRM1-222ENST00000596378 RPAP1Q9BWH6 1393 aaPredicted RBP27.32■■□□□ 1.96
SRRM1-222ENST00000596378 STRCQ7RTU9 1775 aa27.31■■□□□ 1.96
SRRM1-222ENST00000596378 TNNI3KQ59H18 835 aa27.31■■□□□ 1.96
SRRM1-222ENST00000596378 FPGT-TNNI3KV9GXZ4 949 aa27.31■■□□□ 1.96
SRRM1-222ENST00000596378 COL9A3Q14050 684 aaPredicted RBP27.3■■□□□ 1.96
SRRM1-222ENST00000596378 UBR2Q8IWV8 1755 aa27.3■■□□□ 1.96
SRRM1-222ENST00000596378 IL2RBP14784 551 aa27.3■■□□□ 1.96
SRRM1-222ENST00000596378 KCNJ4P48050 445 aa27.3■■□□□ 1.96
SRRM1-222ENST00000596378 LMBR1LQ6UX01 489 aa27.3■■□□□ 1.96
SRRM1-222ENST00000596378 DNAJC5Q9H3Z4 198 aa27.3■■□□□ 1.96
SRRM1-222ENST00000596378 CHMP3Q9Y3E7 222 aa27.3■■□□□ 1.96
SRRM1-222ENST00000596378 KCPQ6ZWJ8 1503 aa27.29■■□□□ 1.96
SRRM1-222ENST00000596378 ZNF445P59923 1031 aa27.29■■□□□ 1.96
SRRM1-222ENST00000596378 CREB3L3Q68CJ9 461 aa27.29■■□□□ 1.96
SRRM1-222ENST00000596378 HIP1O00291 1037 aa27.29■■□□□ 1.96
SRRM1-222ENST00000596378 KCNB2Q92953 911 aa27.29■■□□□ 1.96
SRRM1-222ENST00000596378 PDRG1Q9NUG6 133 aa27.29■■□□□ 1.96
SRRM1-222ENST00000596378 ABCA3Q99758 1704 aa27.29■■□□□ 1.96
SRRM1-222ENST00000596378 SHANK3Q9BYB0 1731 aa27.29■■□□□ 1.96
SRRM1-222ENST00000596378 ERVV-2B6SEH9 535 aa27.28■■□□□ 1.96
SRRM1-222ENST00000596378 MAP4K1Q92918 833 aa27.28■■□□□ 1.96
SRRM1-222ENST00000596378 ZBTB3Q9H5J0 574 aa27.28■■□□□ 1.96
SRRM1-222ENST00000596378 GDPD2Q9HCC8 539 aa27.28■■□□□ 1.96
SRRM1-222ENST00000596378 TMEM63CQ9P1W3 806 aa27.28■■□□□ 1.96
SRRM1-222ENST00000596378 ZNF589Q86UQ0 364 aaPredicted RBP27.28■■□□□ 1.96
SRRM1-222ENST00000596378 ZSWIM6Q9HCJ5 1215 aa27.28■■□□□ 1.96
SRRM1-222ENST00000596378 CCDC9Q9Y3X0 531 aaKnown RBP27.28■■□□□ 1.96
SRRM1-222ENST00000596378 DBNDD2Q9BQY9 259 aa27.27■■□□□ 1.96
SRRM1-222ENST00000596378 NUP188Q5SRE5 1749 aa27.27■■□□□ 1.96
SRRM1-222ENST00000596378 COL15A1P39059 1388 aa27.27■■□□□ 1.96
SRRM1-222ENST00000596378 CHGBP05060 677 aa27.27■■□□□ 1.96
SRRM1-222ENST00000596378 FOXO4P98177 505 aa27.27■■□□□ 1.96
SRRM1-222ENST00000596378 CYP46A1Q9Y6A2 500 aa27.27■■□□□ 1.96
SRRM1-222ENST00000596378 TAF6LQ9Y6J9 622 aa27.27■■□□□ 1.96
SRRM1-222ENST00000596378 WDR33Q9C0J8 1336 aaKnown RBP27.26■■□□□ 1.95
SRRM1-222ENST00000596378 CARD10Q9BWT7 1032 aa27.26■■□□□ 1.95
SRRM1-222ENST00000596378 NASPP49321 788 aaPredicted RBP27.25■■□□□ 1.95
SRRM1-222ENST00000596378 VPS53Q5VIR6 699 aa27.25■■□□□ 1.95
SRRM1-222ENST00000596378 CCDC83Q8IWF9 413 aa27.25■■□□□ 1.95
SRRM1-222ENST00000596378 TCHHQ07283 1943 aa27.25■■□□□ 1.95
SRRM1-222ENST00000596378 MED23Q9ULK4 1368 aa27.25■■□□□ 1.95
SRRM1-222ENST00000596378 ERBB4Q15303 1308 aa27.25■■□□□ 1.95
SRRM1-222ENST00000596378 H7C1W4 665 aa27.25■■□□□ 1.95
SRRM1-222ENST00000596378 SLC27A2O14975 620 aa27.25■■□□□ 1.95
SRRM1-222ENST00000596378 ZKSCAN1P17029 563 aaPredicted RBP27.25■■□□□ 1.95
SRRM1-222ENST00000596378 PAPPAQ13219 1627 aa27.24■■□□□ 1.95
SRRM1-222ENST00000596378 ATP5JP18859 108 aa27.24■■□□□ 1.95
SRRM1-222ENST00000596378 NKX1-1Q15270 411 aaPredicted RBP27.24■■□□□ 1.95
SRRM1-222ENST00000596378 DNAJC2Q99543 621 aaKnown RBP27.24■■□□□ 1.95
SRRM1-222ENST00000596378 TM6SF1Q9BZW5 370 aa27.24■■□□□ 1.95
SRRM1-222ENST00000596378 SNRKQ9NRH2 765 aa27.24■■□□□ 1.95
SRRM1-222ENST00000596378 EVA1CP58658 441 aa27.24■■□□□ 1.95
SRRM1-222ENST00000596378 CWC25Q9NXE8 425 aaPredicted RBP27.24■■□□□ 1.95
SRRM1-222ENST00000596378 TJP1Q07157 1748 aa27.24■■□□□ 1.95
SRRM1-222ENST00000596378 PRIM1P49642 420 aaKnown RBP27.23■■□□□ 1.95
SRRM1-222ENST00000596378 SMC3Q9UQE7 1217 aa27.23■■□□□ 1.95
SRRM1-222ENST00000596378 ST3GAL1Q11201 340 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms