RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 LAMB4A4D0S4 1761 aa20.97■□□□□ 0.95
GTF2F1-203ENST00000594213 RIPK4P57078 832 aa20.96■□□□□ 0.95
GTF2F1-203ENST00000594213 C3orf67Q6ZVT6 689 aa20.96■□□□□ 0.95
GTF2F1-203ENST00000594213 TSPYL4Q9UJ04 414 aa20.96■□□□□ 0.95
GTF2F1-203ENST00000594213 RALBP1Q15311 655 aa20.95■□□□□ 0.94
GTF2F1-203ENST00000594213 SLC51AQ86UW1 340 aa20.95■□□□□ 0.94
GTF2F1-203ENST00000594213 DLG5Q8TDM6 1919 aa20.95■□□□□ 0.94
GTF2F1-203ENST00000594213 EPHX2P34913 555 aa20.94■□□□□ 0.94
GTF2F1-203ENST00000594213 TMPOP42166 694 aaKnown RBP20.94■□□□□ 0.94
GTF2F1-203ENST00000594213 PROSER3Q2NL68 480 aa20.94■□□□□ 0.94
GTF2F1-203ENST00000594213 GRIPAP1Q4V328 841 aa20.94■□□□□ 0.94
GTF2F1-203ENST00000594213 PARP10Q53GL7 1025 aa20.94■□□□□ 0.94
GTF2F1-203ENST00000594213 SLC10A5Q5PT55 438 aa20.94■□□□□ 0.94
GTF2F1-203ENST00000594213 GPC2Q8N158 579 aa20.94■□□□□ 0.94
GTF2F1-203ENST00000594213 RPGRQ92834 1020 aaKnown RBP20.94■□□□□ 0.94
GTF2F1-203ENST00000594213 MKRN1Q9UHC7 482 aaKnown RBP20.94■□□□□ 0.94
GTF2F1-203ENST00000594213 CACNA1SQ13698 1873 aa20.94■□□□□ 0.94
GTF2F1-203ENST00000594213 RBM17Q96I25 401 aaKnown RBP20.93■□□□□ 0.94
GTF2F1-203ENST00000594213 CNTNAP1P78357 1384 aa20.93■□□□□ 0.94
GTF2F1-203ENST00000594213 EIF2S2P20042 333 aaKnown RBP20.92■□□□□ 0.94
GTF2F1-203ENST00000594213 EAPPQ56P03 285 aaPredicted RBP20.92■□□□□ 0.94
GTF2F1-203ENST00000594213 PPP1R42Q7Z4L9 355 aa20.92■□□□□ 0.94
GTF2F1-203ENST00000594213 PNMA8AQ86V59 439 aaPredicted RBP20.92■□□□□ 0.94
GTF2F1-203ENST00000594213 TNS4Q8IZW8 715 aa20.92■□□□□ 0.94
GTF2F1-203ENST00000594213 JDP2Q8WYK2 163 aa20.92■□□□□ 0.94
GTF2F1-203ENST00000594213 RNF123Q5XPI4 1314 aa20.92■□□□□ 0.94
GTF2F1-203ENST00000594213 COL4A5P29400 1685 aa20.92■□□□□ 0.94
GTF2F1-203ENST00000594213 SCN4AP35499 1836 aa20.92■□□□□ 0.94
GTF2F1-203ENST00000594213 ANXA1P04083 346 aa20.91■□□□□ 0.94
GTF2F1-203ENST00000594213 NUP98P52948 1817 aa20.9■□□□□ 0.94
GTF2F1-203ENST00000594213 TMEM88BA6NKF7 163 aa20.9■□□□□ 0.94
GTF2F1-203ENST00000594213 UTP14AQ9BVJ6 771 aaKnown RBP20.9■□□□□ 0.94
GTF2F1-203ENST00000594213 PPEF1O14829 653 aaPredicted RBP20.89■□□□□ 0.93
GTF2F1-203ENST00000594213 CNTROBQ8N137 903 aa20.89■□□□□ 0.93
GTF2F1-203ENST00000594213 NLRP3Q96P20 1036 aa20.89■□□□□ 0.93
GTF2F1-203ENST00000594213 ADAMTSL1Q8N6G6 1762 aa20.88■□□□□ 0.93
GTF2F1-203ENST00000594213 CHL1O00533 1208 aa20.88■□□□□ 0.93
GTF2F1-203ENST00000594213 EIF6P56537 245 aaKnown RBP20.88■□□□□ 0.93
GTF2F1-203ENST00000594213 LMOD3Q0VAK6 560 aa20.88■□□□□ 0.93
GTF2F1-203ENST00000594213 COPS6Q7L5N1 327 aa20.88■□□□□ 0.93
GTF2F1-203ENST00000594213 CLEC11AQ9Y240 323 aa20.88■□□□□ 0.93
GTF2F1-203ENST00000594213 ATP6V0A2Q9Y487 856 aa20.88■□□□□ 0.93
GTF2F1-203ENST00000594213 VEGFBP49765 207 aa20.87■□□□□ 0.93
GTF2F1-203ENST00000594213 SCNN1DP51172 638 aa20.87■□□□□ 0.93
GTF2F1-203ENST00000594213 MAP1SQ66K74 1059 aaPredicted RBP20.87■□□□□ 0.93
GTF2F1-203ENST00000594213 NLRP10Q86W26 655 aa20.87■□□□□ 0.93
GTF2F1-203ENST00000594213 LARGE2Q8N3Y3 721 aa20.87■□□□□ 0.93
GTF2F1-203ENST00000594213 TCERG1O14776 1098 aaKnown RBP20.86■□□□□ 0.93
GTF2F1-203ENST00000594213 XAGE3Q8WTP9 111 aa20.86■□□□□ 0.93
GTF2F1-203ENST00000594213 RTFDC1Q9BY42 306 aaPredicted RBP20.86■□□□□ 0.93
GTF2F1-203ENST00000594213 VPS33BQ9H267 617 aa20.86■□□□□ 0.93
GTF2F1-203ENST00000594213 TRIM35Q9UPQ4 493 aa20.86■□□□□ 0.93
GTF2F1-203ENST00000594213 GJA3Q9Y6H8 435 aa20.86■□□□□ 0.93
GTF2F1-203ENST00000594213 ABCC4O15439 1325 aa20.85■□□□□ 0.93
GTF2F1-203ENST00000594213 EPS15P42566 896 aa20.85■□□□□ 0.93
GTF2F1-203ENST00000594213 TCIRG1Q13488 830 aa20.85■□□□□ 0.93
GTF2F1-203ENST00000594213 KRT24Q2M2I5 525 aa20.85■□□□□ 0.93
GTF2F1-203ENST00000594213 DDX21Q9NR30 783 aaKnown RBP eCLIP20.85■□□□□ 0.93
GTF2F1-203ENST00000594213 RASSF10A6NK89 507 aa20.84■□□□□ 0.93
GTF2F1-203ENST00000594213 FOXN1O15353 648 aa20.84■□□□□ 0.93
GTF2F1-203ENST00000594213 BBOX1O75936 387 aa20.84■□□□□ 0.93
GTF2F1-203ENST00000594213 HSP90AB3PQ58FF7 597 aa20.84■□□□□ 0.93
GTF2F1-203ENST00000594213 NECTIN2Q92692 538 aa20.84■□□□□ 0.93
GTF2F1-203ENST00000594213 MYBBP1AQ9BQG0 1328 aaKnown RBP20.83■□□□□ 0.93
GTF2F1-203ENST00000594213 HCLS1P14317 486 aaPredicted RBP20.83■□□□□ 0.93
GTF2F1-203ENST00000594213 AIMP1Q12904 312 aaKnown RBP20.83■□□□□ 0.93
GTF2F1-203ENST00000594213 NIM1KQ8IY84 436 aa20.83■□□□□ 0.93
GTF2F1-203ENST00000594213 CCDC146Q8IYE0 955 aa20.83■□□□□ 0.93
GTF2F1-203ENST00000594213 PPIP5K2O43314 1243 aa20.82■□□□□ 0.92
GTF2F1-203ENST00000594213 DDX10Q13206 875 aaKnown RBP20.82■□□□□ 0.92
GTF2F1-203ENST00000594213 AOC3Q16853 763 aa20.82■□□□□ 0.92
GTF2F1-203ENST00000594213 SP8Q8IXZ3 490 aa20.82■□□□□ 0.92
GTF2F1-203ENST00000594213 WBP1LQ9NX94 342 aa20.82■□□□□ 0.92
GTF2F1-203ENST00000594213 LMOD1P29536 600 aaPredicted RBP20.81■□□□□ 0.92
GTF2F1-203ENST00000594213 NEUROD2Q15784 382 aa20.81■□□□□ 0.92
GTF2F1-203ENST00000594213 USP50Q70EL3 339 aaPredicted RBP20.81■□□□□ 0.92
GTF2F1-203ENST00000594213 RUNDC1Q96C34 613 aa20.81■□□□□ 0.92
GTF2F1-203ENST00000594213 LTBP1Q14766 1721 aa20.81■□□□□ 0.92
GTF2F1-203ENST00000594213 CAPN15O75808 1086 aa20.8■□□□□ 0.92
GTF2F1-203ENST00000594213 CXCL9Q07325 125 aa20.8■□□□□ 0.92
GTF2F1-203ENST00000594213 DEFB115Q30KQ5 88 aa20.8■□□□□ 0.92
GTF2F1-203ENST00000594213 PRDM10Q9NQV6 1147 aa20.8■□□□□ 0.92
GTF2F1-203ENST00000594213 TRMT112Q9UI30 125 aaKnown RBP20.8■□□□□ 0.92
GTF2F1-203ENST00000594213 ZNRF3Q9ULT6 936 aa20.8■□□□□ 0.92
GTF2F1-203ENST00000594213 HOXB7P09629 217 aa20.79■□□□□ 0.92
GTF2F1-203ENST00000594213 FMR1Q06787 632 aaKnown RBP eCLIP20.79■□□□□ 0.92
GTF2F1-203ENST00000594213 SUPT20HQ8NEM7 779 aa20.79■□□□□ 0.92
GTF2F1-203ENST00000594213 TMX4Q9H1E5 349 aaPredicted RBP20.79■□□□□ 0.92
GTF2F1-203ENST00000594213 CHPF2Q9P2E5 772 aa20.79■□□□□ 0.92
GTF2F1-203ENST00000594213 ADAMTS8Q9UP79 889 aa20.79■□□□□ 0.92
GTF2F1-203ENST00000594213 SH3TC1Q8TE82 1336 aa20.78■□□□□ 0.92
GTF2F1-203ENST00000594213 KIAA2012Q0VF49 1180 aa20.78■□□□□ 0.92
GTF2F1-203ENST00000594213 GRAPQ13588 217 aa20.78■□□□□ 0.92
GTF2F1-203ENST00000594213 MPNDQ8N594 471 aa20.78■□□□□ 0.92
GTF2F1-203ENST00000594213 PLBD2Q8NHP8 589 aa20.78■□□□□ 0.92
GTF2F1-203ENST00000594213 GRAPLQ8TC17 118 aaPredicted RBP20.78■□□□□ 0.92
GTF2F1-203ENST00000594213 ISCA1Q9BUE6 129 aa20.78■□□□□ 0.92
GTF2F1-203ENST00000594213 GPRC5DQ9NZD1 345 aa20.78■□□□□ 0.92
GTF2F1-203ENST00000594213 DPP8Q6V1X1 898 aaPredicted RBP20.77■□□□□ 0.92
GTF2F1-203ENST00000594213 DDX46Q7L014 1031 aaKnown RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms