RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 TLR7Q9NYK1 1049 aaKnown RBP19.73■□□□□ 0.75
LIG1-206ENST00000594067 ADGRL3Q9HAR2 1447 aa19.73■□□□□ 0.75
LIG1-206ENST00000594067 ME3Q16798 604 aa19.73■□□□□ 0.75
LIG1-206ENST00000594067 ANKLE2Q86XL3 938 aa19.73■□□□□ 0.75
LIG1-206ENST00000594067 KCNB2Q92953 911 aa19.73■□□□□ 0.75
LIG1-206ENST00000594067 TM6SF1Q9BZW5 370 aa19.73■□□□□ 0.75
LIG1-206ENST00000594067 USP25Q9UHP3 1055 aa19.73■□□□□ 0.75
LIG1-206ENST00000594067 ATP6V1DQ9Y5K8 247 aa19.73■□□□□ 0.75
LIG1-206ENST00000594067 HEG1Q9ULI3 1381 aa19.73■□□□□ 0.75
LIG1-206ENST00000594067 HCLS1P14317 486 aaPredicted RBP19.72■□□□□ 0.75
LIG1-206ENST00000594067 CREB3L3Q68CJ9 461 aa19.72■□□□□ 0.75
LIG1-206ENST00000594067 ZSCAN31Q96LW9 406 aaPredicted RBP19.72■□□□□ 0.75
LIG1-206ENST00000594067 HDAC5Q9UQL6 1122 aa19.72■□□□□ 0.75
LIG1-206ENST00000594067 VPS37CA5D8V6 355 aaPredicted RBP19.72■□□□□ 0.75
LIG1-206ENST00000594067 ZKSCAN1P17029 563 aaPredicted RBP19.72■□□□□ 0.75
LIG1-206ENST00000594067 COL9A3Q14050 684 aaPredicted RBP19.72■□□□□ 0.75
LIG1-206ENST00000594067 BOLA2Q9H3K6 86 aa19.71■□□□□ 0.75
LIG1-206ENST00000594067 SH2B1Q9NRF2 756 aaPredicted RBP19.71■□□□□ 0.75
LIG1-206ENST00000594067 AXIN2Q9Y2T1 843 aa19.71■□□□□ 0.75
LIG1-206ENST00000594067 NCAPD2Q15021 1401 aa19.71■□□□□ 0.75
LIG1-206ENST00000594067 KLHDC4Q8TBB5 520 aa19.71■□□□□ 0.75
LIG1-206ENST00000594067 ZNF830Q96NB3 372 aaPredicted RBP19.71■□□□□ 0.75
LIG1-206ENST00000594067 DDX58O95786 925 aaKnown RBP19.7■□□□□ 0.74
LIG1-206ENST00000594067 DDX21Q9NR30 783 aaKnown RBP eCLIP19.7■□□□□ 0.74
LIG1-206ENST00000594067 TPCN1Q9ULQ1 816 aa19.7■□□□□ 0.74
LIG1-206ENST00000594067 LETM1O95202 739 aaPredicted RBP19.69■□□□□ 0.74
LIG1-206ENST00000594067 SLC39A6Q13433 755 aa19.69■□□□□ 0.74
LIG1-206ENST00000594067 GIMAP6Q6P9H5 292 aa19.69■□□□□ 0.74
LIG1-206ENST00000594067 RIC3Q7Z5B4 369 aa19.69■□□□□ 0.74
LIG1-206ENST00000594067 PIBF1Q8WXW3 757 aa19.69■□□□□ 0.74
LIG1-206ENST00000594067 MAP4K1Q92918 833 aa19.69■□□□□ 0.74
LIG1-206ENST00000594067 A0A0D9SFI3 127 aa19.69■□□□□ 0.74
LIG1-206ENST00000594067 SLC27A2O14975 620 aa19.69■□□□□ 0.74
LIG1-206ENST00000594067 IGKV5-2P06315 115 aa19.69■□□□□ 0.74
LIG1-206ENST00000594067 PDIA6Q15084 440 aa19.69■□□□□ 0.74
LIG1-206ENST00000594067 MYRIPQ8NFW9 859 aa19.69■□□□□ 0.74
LIG1-206ENST00000594067 TCEANC2Q96MN5 208 aa19.69■□□□□ 0.74
LIG1-206ENST00000594067 UTYO14607 1347 aa19.69■□□□□ 0.74
LIG1-206ENST00000594067 FSD1Q9BTV5 496 aa19.69■□□□□ 0.74
LIG1-206ENST00000594067 ADCY5O95622 1261 aa19.68■□□□□ 0.74
LIG1-206ENST00000594067 MYL6BP14649 208 aa19.68■□□□□ 0.74
LIG1-206ENST00000594067 CHD2O14647 1828 aaKnown RBP19.68■□□□□ 0.74
LIG1-206ENST00000594067 HIP1O00291 1037 aa19.68■□□□□ 0.74
LIG1-206ENST00000594067 NOLC1Q14978 699 aaKnown RBP eCLIP19.68■□□□□ 0.748e-7■■■□□ 15.4
LIG1-206ENST00000594067 DNTTIP2Q5QJE6 756 aaKnown RBP19.67■□□□□ 0.74
LIG1-206ENST00000594067 TAF6LQ9Y6J9 622 aa19.67■□□□□ 0.74
LIG1-206ENST00000594067 TTC12Q9H892 705 aaPredicted RBP19.67■□□□□ 0.74
LIG1-206ENST00000594067 OVOS2A0A0G2JMS6 1433 aa19.66■□□□□ 0.74
LIG1-206ENST00000594067 LARP1BQ659C4 914 aaKnown RBP19.66■□□□□ 0.74
LIG1-206ENST00000594067 FERMT3Q86UX7 667 aa19.66■□□□□ 0.74
LIG1-206ENST00000594067 PRDM4Q9UKN5 801 aa19.66■□□□□ 0.74
LIG1-206ENST00000594067 PHRF1Q9P1Y6 1649 aaKnown RBP19.65■□□□□ 0.74
LIG1-206ENST00000594067 PSMA5P28066 241 aa19.65■□□□□ 0.74
LIG1-206ENST00000594067 EPHA10Q5JZY3 1008 aa19.65■□□□□ 0.74
LIG1-206ENST00000594067 JARID2Q92833 1246 aaPredicted RBP19.65■□□□□ 0.74
LIG1-206ENST00000594067 EDC3Q96F86 508 aaKnown RBP19.65■□□□□ 0.74
LIG1-206ENST00000594067 PLCB2Q00722 1185 aa19.65■□□□□ 0.74
LIG1-206ENST00000594067 XAGE3Q8WTP9 111 aa19.65■□□□□ 0.74
LIG1-206ENST00000594067 PRIMPOLQ96LW4 560 aa19.65■□□□□ 0.74
LIG1-206ENST00000594067 MYD88Q99836 296 aa19.65■□□□□ 0.74
LIG1-206ENST00000594067 ARID3AQ99856 593 aa19.65■□□□□ 0.74
LIG1-206ENST00000594067 FUCA2Q9BTY2 467 aa19.65■□□□□ 0.74
LIG1-206ENST00000594067 FAM173BQ6P4H8 233 aa19.64■□□□□ 0.73
LIG1-206ENST00000594067 LARP1Q6PKG0 1096 aaKnown RBP19.64■□□□□ 0.73
LIG1-206ENST00000594067 BLOC1S2Q6QNY1 142 aa19.64■□□□□ 0.73
LIG1-206ENST00000594067 CDC37L1Q7L3B6 337 aa19.64■□□□□ 0.73
LIG1-206ENST00000594067 ZNF589Q86UQ0 364 aaPredicted RBP19.64■□□□□ 0.73
LIG1-206ENST00000594067 NEURL1BA8MQ27 555 aa19.64■□□□□ 0.73
LIG1-206ENST00000594067 ZNF790Q6PG37 636 aa19.64■□□□□ 0.73
LIG1-206ENST00000594067 KDM4AO75164 1064 aa19.63■□□□□ 0.73
LIG1-206ENST00000594067 ZC3H6P61129 1189 aaKnown RBP19.63■□□□□ 0.73
LIG1-206ENST00000594067 NEXNQ0ZGT2 675 aa19.63■□□□□ 0.73
LIG1-206ENST00000594067 COPS6Q7L5N1 327 aa19.63■□□□□ 0.73
LIG1-206ENST00000594067 C17orf53Q8N3J3 647 aaPredicted RBP19.63■□□□□ 0.73
LIG1-206ENST00000594067 CHMP3Q9Y3E7 222 aa19.63■□□□□ 0.73
LIG1-206ENST00000594067 RNF20Q5VTR2 975 aa19.63■□□□□ 0.73
LIG1-206ENST00000594067 SNRKQ9NRH2 765 aa19.63■□□□□ 0.73
LIG1-206ENST00000594067 PIP4K2AP48426 406 aaPredicted RBP19.62■□□□□ 0.73
LIG1-206ENST00000594067 GCKRQ14397 625 aa19.62■□□□□ 0.73
LIG1-206ENST00000594067 TTC6Q86TZ1 520 aa19.62■□□□□ 0.73
LIG1-206ENST00000594067 RPS6KB1P23443 525 aa19.62■□□□□ 0.73
LIG1-206ENST00000594067 GTF2F1P35269 517 aaKnown RBP eCLIP19.62■□□□□ 0.732e-10■■■■■ 37.3
LIG1-206ENST00000594067 HMGN5P82970 282 aaKnown RBP19.62■□□□□ 0.73
LIG1-206ENST00000594067 STK3Q13188 491 aa19.62■□□□□ 0.73
LIG1-206ENST00000594067 SPTLC3Q9NUV7 552 aa19.62■□□□□ 0.73
LIG1-206ENST00000594067 SLIT3O75094 1523 aa19.62■□□□□ 0.73
LIG1-206ENST00000594067 NPHP4O75161 1426 aaPredicted RBP19.62■□□□□ 0.73
LIG1-206ENST00000594067 KRT28Q7Z3Y7 464 aa19.61■□□□□ 0.73
LIG1-206ENST00000594067 TSC1Q92574 1164 aa19.61■□□□□ 0.73
LIG1-206ENST00000594067 MED23Q9ULK4 1368 aa19.61■□□□□ 0.73
LIG1-206ENST00000594067 SMAP1Q8IYB5 467 aaPredicted RBP19.61■□□□□ 0.73
LIG1-206ENST00000594067 NFATC2IPQ8NCF5 419 aa19.61■□□□□ 0.73
LIG1-206ENST00000594067 NDUFB9Q9Y6M9 179 aa19.61■□□□□ 0.73
LIG1-206ENST00000594067 KRT85P78386 507 aa19.6■□□□□ 0.73
LIG1-206ENST00000594067 TOB2Q14106 344 aaPredicted RBP19.6■□□□□ 0.73
LIG1-206ENST00000594067 SLC52A2Q9HAB3 445 aa19.6■□□□□ 0.73
LIG1-206ENST00000594067 ZNF710Q8N1W2 664 aa19.6■□□□□ 0.73
LIG1-206ENST00000594067 RAPGEF4Q8WZA2 1011 aa19.6■□□□□ 0.73
LIG1-206ENST00000594067 CCDC94Q9BW85 323 aaPredicted RBP19.6■□□□□ 0.73
LIG1-206ENST00000594067 AP5Z1O43299 807 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms