RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 IFT57Q9NWB7 429 aa17.02■□□□□ 0.32
PRKCSH-218ENST00000593053 NUP98P52948 1817 aa17.01■□□□□ 0.31
PRKCSH-218ENST00000593053 VEGFAP15692 232 aaPredicted RBP17.01■□□□□ 0.31
PRKCSH-218ENST00000593053 GNAI1P63096 354 aa17.01■□□□□ 0.31
PRKCSH-218ENST00000593053 FKBP4Q02790 459 aaKnown RBP eCLIP17.01■□□□□ 0.31
PRKCSH-218ENST00000593053 C3orf67Q6ZVT6 689 aa17.01■□□□□ 0.31
PRKCSH-218ENST00000593053 RTKN2Q8IZC4 609 aa17.01■□□□□ 0.31
PRKCSH-218ENST00000593053 ZNF277Q9NRM2 450 aaPredicted RBP17.01■□□□□ 0.31
PRKCSH-218ENST00000593053 DBF4Q9UBU7 674 aaPredicted RBP17.01■□□□□ 0.31
PRKCSH-218ENST00000593053 HOXA10P31260 410 aaPredicted RBP17■□□□□ 0.31
PRKCSH-218ENST00000593053 TCIRG1Q13488 830 aa17■□□□□ 0.31
PRKCSH-218ENST00000593053 NLRP10Q86W26 655 aa17■□□□□ 0.31
PRKCSH-218ENST00000593053 RBM17Q96I25 401 aaKnown RBP17■□□□□ 0.31
PRKCSH-218ENST00000593053 FER1L6Q2WGJ9 1857 aa16.99■□□□□ 0.31
PRKCSH-218ENST00000593053 TIAM2Q8IVF5 1701 aa16.99■□□□□ 0.31
PRKCSH-218ENST00000593053 ELL2O00472 640 aaPredicted RBP16.99■□□□□ 0.31
PRKCSH-218ENST00000593053 ANP32CO43423 234 aa16.99■□□□□ 0.31
PRKCSH-218ENST00000593053 FSTL1Q12841 308 aa16.99■□□□□ 0.31
PRKCSH-218ENST00000593053 NLRP3Q96P20 1036 aa16.99■□□□□ 0.31
PRKCSH-218ENST00000593053 ARFGEF2Q9Y6D5 1785 aa16.99■□□□□ 0.31
PRKCSH-218ENST00000593053 POTECB2RU33 542 aa16.98■□□□□ 0.31
PRKCSH-218ENST00000593053 APLP1P51693 650 aa16.98■□□□□ 0.31
PRKCSH-218ENST00000593053 SLC10A5Q5PT55 438 aa16.98■□□□□ 0.31
PRKCSH-218ENST00000593053 PLBD2Q8NHP8 589 aa16.98■□□□□ 0.31
PRKCSH-218ENST00000593053 CRAMP1Q96RY5 1269 aa16.98■□□□□ 0.31
PRKCSH-218ENST00000593053 MRS2Q9HD23 443 aa16.98■□□□□ 0.31
PRKCSH-218ENST00000593053 HYPKQ9NX55 129 aa16.98■□□□□ 0.31
PRKCSH-218ENST00000593053 TRMT112Q9UI30 125 aaKnown RBP16.98■□□□□ 0.31
PRKCSH-218ENST00000593053 RNF123Q5XPI4 1314 aa16.97■□□□□ 0.31
PRKCSH-218ENST00000593053 CACNA1SQ13698 1873 aa16.97■□□□□ 0.31
PRKCSH-218ENST00000593053 TCERG1O14776 1098 aaKnown RBP16.97■□□□□ 0.31
PRKCSH-218ENST00000593053 PPEF1O14829 653 aaPredicted RBP16.97■□□□□ 0.31
PRKCSH-218ENST00000593053 DDNO94850 711 aaPredicted RBP16.97■□□□□ 0.31
PRKCSH-218ENST00000593053 HCLS1P14317 486 aaPredicted RBP16.97■□□□□ 0.31
PRKCSH-218ENST00000593053 ANKRD13DQ6ZTN6 518 aa16.97■□□□□ 0.31
PRKCSH-218ENST00000593053 SYNE4Q8N205 404 aa16.97■□□□□ 0.31
PRKCSH-218ENST00000593053 ZNF428Q96B54 188 aa16.97■□□□□ 0.31
PRKCSH-218ENST00000593053 CC2D2BQ6DHV5 1058 aa16.96■□□□□ 0.31
PRKCSH-218ENST00000593053 SLC51AQ86UW1 340 aa16.96■□□□□ 0.31
PRKCSH-218ENST00000593053 C8orf58Q8NAV2 365 aa16.96■□□□□ 0.31
PRKCSH-218ENST00000593053 SMC1BQ8NDV3 1235 aa16.96■□□□□ 0.31
PRKCSH-218ENST00000593053 SH3TC1Q8TE82 1336 aa16.96■□□□□ 0.3
PRKCSH-218ENST00000593053 IARSP41252 1262 aaKnown RBP16.95■□□□□ 0.3
PRKCSH-218ENST00000593053 PSMD1Q99460 953 aa16.95■□□□□ 0.3
PRKCSH-218ENST00000593053 SNED1Q8TER0 1413 aa16.95■□□□□ 0.3
PRKCSH-218ENST00000593053 ATP5J2-PTCD1G3V325 749 aa16.94■□□□□ 0.3
PRKCSH-218ENST00000593053 ISCA1Q9BUE6 129 aa16.94■□□□□ 0.3
PRKCSH-218ENST00000593053 PHAXQ9H814 394 aaKnown RBP16.94■□□□□ 0.3
PRKCSH-218ENST00000593053 ABCC4O15439 1325 aa16.94■□□□□ 0.3
PRKCSH-218ENST00000593053 ZNF541Q9H0D2 1346 aa16.94■□□□□ 0.3
PRKCSH-218ENST00000593053 CCDC88AQ3V6T2 1871 aa16.93■□□□□ 0.3
PRKCSH-218ENST00000593053 CCDC27Q2M243 656 aa16.93■□□□□ 0.3
PRKCSH-218ENST00000593053 TSR2Q969E8 191 aaKnown RBP16.93■□□□□ 0.3
PRKCSH-218ENST00000593053 HTRA3P83110 453 aa16.92■□□□□ 0.3
PRKCSH-218ENST00000593053 GOLGA2Q08379 1002 aa16.92■□□□□ 0.3
PRKCSH-218ENST00000593053 GRIPAP1Q4V328 841 aa16.92■□□□□ 0.3
PRKCSH-218ENST00000593053 RIC3Q7Z5B4 369 aa16.92■□□□□ 0.3
PRKCSH-218ENST00000593053 WWC1Q8IX03 1113 aa16.92■□□□□ 0.3
PRKCSH-218ENST00000593053 TSPYL6Q8N831 410 aa16.92■□□□□ 0.3
PRKCSH-218ENST00000593053 FAM89AQ96GI7 184 aa16.92■□□□□ 0.3
PRKCSH-218ENST00000593053 TMX4Q9H1E5 349 aaPredicted RBP16.92■□□□□ 0.3
PRKCSH-218ENST00000593053 ATP6V0A2Q9Y487 856 aa16.92■□□□□ 0.3
PRKCSH-218ENST00000593053 WDR90Q96KV7 1748 aa16.92■□□□□ 0.3
PRKCSH-218ENST00000593053 FZD9O00144 591 aa16.91■□□□□ 0.3
PRKCSH-218ENST00000593053 DDX46Q7L014 1031 aaKnown RBP16.91■□□□□ 0.3
PRKCSH-218ENST00000593053 JDP2Q8WYK2 163 aa16.91■□□□□ 0.3
PRKCSH-218ENST00000593053 L3MBTL3Q96JM7 780 aaPredicted RBP16.91■□□□□ 0.3
PRKCSH-218ENST00000593053 DICER1Q9UPY3 1922 aaKnown RBP16.9■□□□□ 0.3
PRKCSH-218ENST00000593053 IQCA1LA6NCM1 817 aa16.9■□□□□ 0.3
PRKCSH-218ENST00000593053 BBOX1O75936 387 aa16.9■□□□□ 0.3
PRKCSH-218ENST00000593053 RTL5Q5HYW3 569 aaPredicted RBP16.9■□□□□ 0.3
PRKCSH-218ENST00000593053 CCDC30Q5VVM6 783 aa16.9■□□□□ 0.3
PRKCSH-218ENST00000593053 LARGE2Q8N3Y3 721 aa16.9■□□□□ 0.3
PRKCSH-218ENST00000593053 DNAJC5GQ8N7S2 189 aa16.9■□□□□ 0.3
PRKCSH-218ENST00000593053 CHMP4AQ9BY43 222 aa16.9■□□□□ 0.3
PRKCSH-218ENST00000593053 POTEIP0CG38 1075 aa16.89■□□□□ 0.29
PRKCSH-218ENST00000593053 POTEJP0CG39 1038 aa16.89■□□□□ 0.29
PRKCSH-218ENST00000593053 TRIM28Q13263 835 aaKnown RBP16.89■□□□□ 0.29
PRKCSH-218ENST00000593053 GRAPQ13588 217 aa16.89■□□□□ 0.29
PRKCSH-218ENST00000593053 GRAPLQ8TC17 118 aaPredicted RBP16.89■□□□□ 0.29
PRKCSH-218ENST00000593053 SALL2Q9Y467 1007 aaPredicted RBP16.89■□□□□ 0.29
PRKCSH-218ENST00000593053 ANKRD36CQ5JPF3 1778 aa16.89■□□□□ 0.29
PRKCSH-218ENST00000593053 MYD88Q99836 296 aa16.88■□□□□ 0.29
PRKCSH-218ENST00000593053 TAF1DQ9H5J8 278 aaPredicted RBP16.88■□□□□ 0.29
PRKCSH-218ENST00000593053 PPIP5K2O43314 1243 aa16.87■□□□□ 0.29
PRKCSH-218ENST00000593053 EIF6P56537 245 aaKnown RBP16.87■□□□□ 0.29
PRKCSH-218ENST00000593053 NCBP3Q53F19 620 aaKnown RBP16.87■□□□□ 0.29
PRKCSH-218ENST00000593053 CHADLQ6NUI6 762 aa16.87■□□□□ 0.29
PRKCSH-218ENST00000593053 SP8Q8IXZ3 490 aa16.87■□□□□ 0.29
PRKCSH-218ENST00000593053 GPC2Q8N158 579 aa16.87■□□□□ 0.29
PRKCSH-218ENST00000593053 HACL1Q9UJ83 578 aa16.87■□□□□ 0.29
PRKCSH-218ENST00000593053 IL16Q14005 1332 aa16.87■□□□□ 0.29
PRKCSH-218ENST00000593053 COL4A5P29400 1685 aa16.87■□□□□ 0.29
PRKCSH-218ENST00000593053 IRS4O14654 1257 aaPredicted RBP16.86■□□□□ 0.29
PRKCSH-218ENST00000593053 DDX58O95786 925 aaKnown RBP16.86■□□□□ 0.29
PRKCSH-218ENST00000593053 SF3B3Q15393 1217 aaKnown RBP16.86■□□□□ 0.29
PRKCSH-218ENST00000593053 AOC3Q16853 763 aa16.86■□□□□ 0.29
PRKCSH-218ENST00000593053 DPP8Q6V1X1 898 aaPredicted RBP16.86■□□□□ 0.29
PRKCSH-218ENST00000593053 NIM1KQ8IY84 436 aa16.86■□□□□ 0.29
PRKCSH-218ENST00000593053 STK31Q9BXU1 1019 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms