RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 TRAPPC3LQ5T215 181 aa15.45■□□□□ 0.06
SMARCA4-216ENST00000591545 TANGO6Q9C0B7 1094 aa15.45■□□□□ 0.06
SMARCA4-216ENST00000591545 ZC3H12CQ9C0D7 883 aaKnown RBP15.45■□□□□ 0.06
SMARCA4-216ENST00000591545 CHPF2Q9P2E5 772 aa15.45■□□□□ 0.06
SMARCA4-216ENST00000591545 ABCC1P33527 1531 aa15.45■□□□□ 0.06
SMARCA4-216ENST00000591545 CASTP20810 708 aaKnown RBP15.45■□□□□ 0.06
SMARCA4-216ENST00000591545 SEPT7Q16181 437 aaKnown RBP15.45■□□□□ 0.06
SMARCA4-216ENST00000591545 ARHGAP29Q52LW3 1261 aa15.45■□□□□ 0.06
SMARCA4-216ENST00000591545 CRNKL1Q9BZJ0 848 aaKnown RBP15.45■□□□□ 0.06
SMARCA4-216ENST00000591545 CTAGE5O15320 804 aa15.45■□□□□ 0.06
SMARCA4-216ENST00000591545 NEMFO60524 1076 aa15.45■□□□□ 0.06
SMARCA4-216ENST00000591545 ALDH1L1O75891 902 aa15.45■□□□□ 0.06
SMARCA4-216ENST00000591545 FILIP1Q7Z7B0 1213 aa15.45■□□□□ 0.06
SMARCA4-216ENST00000591545 NFATC2IPQ8NCF5 419 aa15.45■□□□□ 0.06
SMARCA4-216ENST00000591545 UBE2Q2Q8WVN8 375 aa15.45■□□□□ 0.06
SMARCA4-216ENST00000591545 SFPQP23246 707 aaKnown RBP eCLIP15.45■□□□□ 0.06
SMARCA4-216ENST00000591545 TMCO3Q6UWJ1 677 aa15.45■□□□□ 0.06
SMARCA4-216ENST00000591545 ARHGEF10O15013 1369 aa15.44■□□□□ 0.06
SMARCA4-216ENST00000591545 MCM3P25205 808 aa15.44■□□□□ 0.06
SMARCA4-216ENST00000591545 CHMP4BP1P59074 171 aa15.44■□□□□ 0.06
SMARCA4-216ENST00000591545 EVI5LQ96CN4 794 aa15.44■□□□□ 0.06
SMARCA4-216ENST00000591545 EYA3Q99504 573 aa15.44■□□□□ 0.06
SMARCA4-216ENST00000591545 MCM5P33992 734 aa15.44■□□□□ 0.06
SMARCA4-216ENST00000591545 PRPF40BQ6NWY9 871 aaKnown RBP15.44■□□□□ 0.06
SMARCA4-216ENST00000591545 ZNF804AQ7Z570 1209 aa15.44■□□□□ 0.06
SMARCA4-216ENST00000591545 SYCE3A1L190 88 aa15.44■□□□□ 0.06
SMARCA4-216ENST00000591545 GOLIM4O00461 696 aa15.44■□□□□ 0.06
SMARCA4-216ENST00000591545 MPHOSPH6Q99547 160 aaKnown RBP15.44■□□□□ 0.06
SMARCA4-216ENST00000591545 SLC12A7Q9Y666 1083 aa15.44■□□□□ 0.06
SMARCA4-216ENST00000591545 KDM6BO15054 1643 aa15.44■□□□□ 0.06
SMARCA4-216ENST00000591545 CATIPQ7Z7H3 387 aa15.44■□□□□ 0.06
SMARCA4-216ENST00000591545 TAF4BQ92750 862 aa15.44■□□□□ 0.06
SMARCA4-216ENST00000591545 POLKQ9UBT6 870 aa15.44■□□□□ 0.06
SMARCA4-216ENST00000591545 MYCNP04198 464 aaPredicted RBP15.43■□□□□ 0.06
SMARCA4-216ENST00000591545 PPP4R3BQ5MIZ7 849 aa15.43■□□□□ 0.06
SMARCA4-216ENST00000591545 IFIT3O14879 490 aaKnown RBP15.43■□□□□ 0.06
SMARCA4-216ENST00000591545 PTPN14Q15678 1187 aa15.43■□□□□ 0.06
SMARCA4-216ENST00000591545 KSR2Q6VAB6 950 aa15.43■□□□□ 0.06
SMARCA4-216ENST00000591545 DNAI2Q9GZS0 605 aa15.43■□□□□ 0.06
SMARCA4-216ENST00000591545 SNRKQ9NRH2 765 aa15.43■□□□□ 0.06
SMARCA4-216ENST00000591545 CCNL1Q9UK58 526 aaPredicted RBP15.43■□□□□ 0.06
SMARCA4-216ENST00000591545 GNPATO15228 680 aa15.43■□□□□ 0.06
SMARCA4-216ENST00000591545 IBSPP21815 317 aaPredicted RBP15.43■□□□□ 0.06
SMARCA4-216ENST00000591545 RAB34Q9BZG1 259 aa15.43■□□□□ 0.06
SMARCA4-216ENST00000591545 ZRANB1Q9UGI0 708 aa15.43■□□□□ 0.06
SMARCA4-216ENST00000591545 ZNF397Q8NF99 534 aaPredicted RBP15.43■□□□□ 0.06
SMARCA4-216ENST00000591545 ORAI2Q96SN7 254 aa15.43■□□□□ 0.06
SMARCA4-216ENST00000591545 USP21Q9UK80 565 aa15.43■□□□□ 0.06
SMARCA4-216ENST00000591545 SKIDA1Q1XH10 827 aa15.42■□□□□ 0.06
SMARCA4-216ENST00000591545 MAP9Q49MG5 647 aa15.42■□□□□ 0.06
SMARCA4-216ENST00000591545 HOXC9P31274 260 aa15.42■□□□□ 0.06
SMARCA4-216ENST00000591545 ATP2B3Q16720 1220 aa15.42■□□□□ 0.06
SMARCA4-216ENST00000591545 CFAP100Q494V2 611 aa15.42■□□□□ 0.06
SMARCA4-216ENST00000591545 KIF18AQ8NI77 898 aa15.42■□□□□ 0.06
SMARCA4-216ENST00000591545 TSPY2A6NKD2 308 aa15.42■□□□□ 0.06
SMARCA4-216ENST00000591545 KIF5BP33176 963 aa15.42■□□□□ 0.06
SMARCA4-216ENST00000591545 BAG6P46379 1132 aa15.42■□□□□ 0.06
SMARCA4-216ENST00000591545 JAKMIP3Q5VZ66 844 aa15.42■□□□□ 0.06
SMARCA4-216ENST00000591545 TRIM27P14373 513 aa15.42■□□□□ 0.06
SMARCA4-216ENST00000591545 KIAA1328Q86T90 577 aa15.42■□□□□ 0.06
SMARCA4-216ENST00000591545 ARHGEF12Q9NZN5 1544 aa15.41■□□□□ 0.06
SMARCA4-216ENST00000591545 CCDC12Q8WUD4 166 aaPredicted RBP15.41■□□□□ 0.06
SMARCA4-216ENST00000591545 PHAXQ9H814 394 aaKnown RBP15.41■□□□□ 0.06
SMARCA4-216ENST00000591545 ATP7AQ04656 1500 aa15.41■□□□□ 0.06
SMARCA4-216ENST00000591545 EZRP15311 586 aaKnown RBP15.41■□□□□ 0.06
SMARCA4-216ENST00000591545 EIF5P55010 431 aaKnown RBP15.41■□□□□ 0.06
SMARCA4-216ENST00000591545 MTHFSDQ2M296 383 aaKnown RBP15.41■□□□□ 0.06
SMARCA4-216ENST00000591545 FAM177A1Q8N128 213 aaPredicted RBP15.41■□□□□ 0.06
SMARCA4-216ENST00000591545 JARID2Q92833 1246 aaPredicted RBP15.41■□□□□ 0.06
SMARCA4-216ENST00000591545 CCDC102AQ96A19 550 aa15.41■□□□□ 0.06
SMARCA4-216ENST00000591545 TRAF1Q13077 416 aa15.41■□□□□ 0.06
SMARCA4-216ENST00000591545 DESP17661 470 aa15.4■□□□□ 0.06
SMARCA4-216ENST00000591545 LMOD1P29536 600 aaPredicted RBP15.4■□□□□ 0.06
SMARCA4-216ENST00000591545 EYA1Q99502 592 aa15.4■□□□□ 0.06
SMARCA4-216ENST00000591545 CRACR2AQ9BSW2 395 aa15.4■□□□□ 0.06
SMARCA4-216ENST00000591545 INCENPQ9NQS7 918 aa15.4■□□□□ 0.06
SMARCA4-216ENST00000591545 DDX11Q96FC9 970 aa15.4■□□□□ 0.06
SMARCA4-216ENST00000591545 GRM8O00222 908 aa15.4■□□□□ 0.06
SMARCA4-216ENST00000591545 MAP3K5Q99683 1374 aa15.4■□□□□ 0.06
SMARCA4-216ENST00000591545 IL15P40933 162 aaPredicted RBP15.4■□□□□ 0.06
SMARCA4-216ENST00000591545 DDX19AQ9NUU7 478 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-216ENST00000591545 CGNQ9P2M7 1197 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-216ENST00000591545 NSFL1CQ9UNZ2 370 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-216ENST00000591545 LMBR1LQ6UX01 489 aa15.39■□□□□ 0.05
SMARCA4-216ENST00000591545 ARHGAP45Q92619 1136 aa15.39■□□□□ 0.05
SMARCA4-216ENST00000591545 ASXL1Q8IXJ9 1541 aa15.39■□□□□ 0.05
SMARCA4-216ENST00000591545 CCDC194A0A1B0GVG4 234 aa15.39■□□□□ 0.05
SMARCA4-216ENST00000591545 TMEM266Q2M3C6 531 aa15.39■□□□□ 0.05
SMARCA4-216ENST00000591545 KAT14Q9H8E8 782 aa15.39■□□□□ 0.05
SMARCA4-216ENST00000591545 ZFYVE16Q7Z3T8 1539 aa15.39■□□□□ 0.05
SMARCA4-216ENST00000591545 MAP3K19Q56UN5 1328 aa15.39■□□□□ 0.05
SMARCA4-216ENST00000591545 GOLGA8AA7E2F4 631 aa15.39■□□□□ 0.05
SMARCA4-216ENST00000591545 GOLGA8BA8MQT2 603 aa15.39■□□□□ 0.05
SMARCA4-216ENST00000591545 PPP1R12BO60237 982 aaPredicted RBP15.39■□□□□ 0.05
SMARCA4-216ENST00000591545 ENOX2Q16206 610 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-216ENST00000591545 ANKRD2Q9GZV1 360 aa15.39■□□□□ 0.05
SMARCA4-216ENST00000591545 ZFYP08048 801 aaPredicted RBP15.39■□□□□ 0.05
SMARCA4-216ENST00000591545 FAM98CQ17RN3 349 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-216ENST00000591545 CCDC178Q5BJE1 867 aa15.39■□□□□ 0.05
SMARCA4-216ENST00000591545 KAT6BQ8WYB5 2073 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms