RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 NLRP10Q86W26 655 aa23.29■■□□□ 1.32
CIRBP-227ENST00000590188 PLBD2Q8NHP8 589 aa23.29■■□□□ 1.32
CIRBP-227ENST00000590188 ATP5J2-PTCD1G3V325 749 aa23.28■■□□□ 1.32
CIRBP-227ENST00000590188 LMNB1P20700 586 aa23.28■■□□□ 1.32
CIRBP-227ENST00000590188 C1QTNF8P60827 252 aa23.28■■□□□ 1.32
CIRBP-227ENST00000590188 ARFGEF2Q9Y6D5 1785 aa23.27■■□□□ 1.32
CIRBP-227ENST00000590188 SYNE4Q8N205 404 aa23.27■■□□□ 1.32
CIRBP-227ENST00000590188 RPGRQ92834 1020 aaKnown RBP23.27■■□□□ 1.32
CIRBP-227ENST00000590188 TRMT112Q9UI30 125 aaKnown RBP23.27■■□□□ 1.32
CIRBP-227ENST00000590188 CRY2Q49AN0 593 aa23.26■■□□□ 1.31
CIRBP-227ENST00000590188 CCDC30Q5VVM6 783 aa23.26■■□□□ 1.31
CIRBP-227ENST00000590188 RIC3Q7Z5B4 369 aa23.26■■□□□ 1.31
CIRBP-227ENST00000590188 IL16Q14005 1332 aa23.26■■□□□ 1.31
CIRBP-227ENST00000590188 HCLS1P14317 486 aaPredicted RBP23.25■■□□□ 1.31
CIRBP-227ENST00000590188 GOLGA2Q08379 1002 aa23.25■■□□□ 1.31
CIRBP-227ENST00000590188 TWISTNBQ3B726 338 aaPredicted RBP23.25■■□□□ 1.31
CIRBP-227ENST00000590188 TAOK3Q9H2K8 898 aa23.25■■□□□ 1.31
CIRBP-227ENST00000590188 NMRK2Q9NPI5 230 aa23.25■■□□□ 1.31
CIRBP-227ENST00000590188 FANCIQ9NVI1 1328 aa23.25■■□□□ 1.31
CIRBP-227ENST00000590188 ALDH1B1P30837 517 aa23.24■■□□□ 1.31
CIRBP-227ENST00000590188 NCBP3Q53F19 620 aaKnown RBP23.24■■□□□ 1.31
CIRBP-227ENST00000590188 CCDC93Q567U6 631 aa23.24■■□□□ 1.31
CIRBP-227ENST00000590188 C7orf43Q8WVR3 580 aa23.24■■□□□ 1.31
CIRBP-227ENST00000590188 NLRP3Q96P20 1036 aa23.24■■□□□ 1.31
CIRBP-227ENST00000590188 RIC1Q4ADV7 1423 aa23.24■■□□□ 1.31
CIRBP-227ENST00000590188 FER1L6Q2WGJ9 1857 aa23.24■■□□□ 1.31
CIRBP-227ENST00000590188 CCDC88AQ3V6T2 1871 aa23.24■■□□□ 1.31
CIRBP-227ENST00000590188 KIF3CO14782 793 aa23.23■■□□□ 1.31
CIRBP-227ENST00000590188 RTL5Q5HYW3 569 aaPredicted RBP23.23■■□□□ 1.31
CIRBP-227ENST00000590188 SOGA3Q5TF21 947 aa23.23■■□□□ 1.31
CIRBP-227ENST00000590188 SLC51AQ86UW1 340 aa23.23■■□□□ 1.31
CIRBP-227ENST00000590188 WDR63Q8IWG1 891 aa23.23■■□□□ 1.31
CIRBP-227ENST00000590188 RBM17Q96I25 401 aaKnown RBP23.23■■□□□ 1.31
CIRBP-227ENST00000590188 MYD88Q99836 296 aa23.22■■□□□ 1.31
CIRBP-227ENST00000590188 ISCA1Q9BUE6 129 aa23.22■■□□□ 1.31
CIRBP-227ENST00000590188 SPINK5Q9NQ38 1064 aaPredicted RBP23.22■■□□□ 1.31
CIRBP-227ENST00000590188 TIAM2Q8IVF5 1701 aa23.22■■□□□ 1.31
CIRBP-227ENST00000590188 STK31Q9BXU1 1019 aa23.21■■□□□ 1.31
CIRBP-227ENST00000590188 SH3TC1Q8TE82 1336 aa23.21■■□□□ 1.31
CIRBP-227ENST00000590188 SLC10A5Q5PT55 438 aa23.2■■□□□ 1.3
CIRBP-227ENST00000590188 FAM89AQ96GI7 184 aa23.2■■□□□ 1.3
CIRBP-227ENST00000590188 RNF123Q5XPI4 1314 aa23.19■■□□□ 1.3
CIRBP-227ENST00000590188 KDM2BQ8NHM5 1336 aa23.19■■□□□ 1.3
CIRBP-227ENST00000590188 LTBP3Q9NS15 1303 aa23.19■■□□□ 1.3
CIRBP-227ENST00000590188 HOXA10P31260 410 aaPredicted RBP23.19■■□□□ 1.3
CIRBP-227ENST00000590188 EXOSC9Q06265 439 aaKnown RBP23.19■■□□□ 1.3
CIRBP-227ENST00000590188 ZNF277Q9NRM2 450 aaPredicted RBP23.19■■□□□ 1.3
CIRBP-227ENST00000590188 PPEF1O14829 653 aaPredicted RBP23.18■■□□□ 1.3
CIRBP-227ENST00000590188 G2E3Q7L622 706 aa23.18■■□□□ 1.3
CIRBP-227ENST00000590188 CHMP4AQ9BY43 222 aa23.18■■□□□ 1.3
CIRBP-227ENST00000590188 RRAGCQ9HB90 399 aa23.18■■□□□ 1.3
CIRBP-227ENST00000590188 DDX58O95786 925 aaKnown RBP23.17■■□□□ 1.3
CIRBP-227ENST00000590188 FKBP4Q02790 459 aaKnown RBP eCLIP23.17■■□□□ 1.3
CIRBP-227ENST00000590188 CRAMP1Q96RY5 1269 aa23.17■■□□□ 1.3
CIRBP-227ENST00000590188 LAMB2P55268 1798 aa23.17■■□□□ 1.3
CIRBP-227ENST00000590188 ABCC4O15439 1325 aa23.16■■□□□ 1.3
CIRBP-227ENST00000590188 ZC3H4Q9UPT8 1303 aaKnown RBP23.16■■□□□ 1.3
CIRBP-227ENST00000590188 SLC4A2P04920 1241 aa23.16■■□□□ 1.3
CIRBP-227ENST00000590188 RTKN2Q8IZC4 609 aa23.16■■□□□ 1.3
CIRBP-227ENST00000590188 JARID2Q92833 1246 aaPredicted RBP23.16■■□□□ 1.3
CIRBP-227ENST00000590188 MAP3K2Q9Y2U5 619 aa23.16■■□□□ 1.3
CIRBP-227ENST00000590188 PI4KAP2A4QPH2 592 aa23.14■■□□□ 1.29
CIRBP-227ENST00000590188 GLTPD2A6NH11 291 aa23.14■■□□□ 1.29
CIRBP-227ENST00000590188 PI4KAP1Q8N8J0 262 aa23.14■■□□□ 1.29
CIRBP-227ENST00000590188 METTL22Q9BUU2 404 aaPredicted RBP23.14■■□□□ 1.29
CIRBP-227ENST00000590188 DDX60Q8IY21 1712 aaKnown RBP23.13■■□□□ 1.29
CIRBP-227ENST00000590188 VAMP4O75379 141 aa23.13■■□□□ 1.29
CIRBP-227ENST00000590188 DDX46Q7L014 1031 aaKnown RBP23.13■■□□□ 1.29
CIRBP-227ENST00000590188 MYH16Q9H6N6 1097 aa23.13■■□□□ 1.29
CIRBP-227ENST00000590188 DICER1Q9UPY3 1922 aaKnown RBP23.12■■□□□ 1.29
CIRBP-227ENST00000590188 IRS4O14654 1257 aaPredicted RBP23.12■■□□□ 1.29
CIRBP-227ENST00000590188 TRIM28Q13263 835 aaKnown RBP23.12■■□□□ 1.29
CIRBP-227ENST00000590188 KSR2Q6VAB6 950 aa23.12■■□□□ 1.29
CIRBP-227ENST00000590188 C16orf71Q8IYS4 520 aaPredicted RBP23.12■■□□□ 1.29
CIRBP-227ENST00000590188 SNED1Q8TER0 1413 aa23.11■■□□□ 1.29
CIRBP-227ENST00000590188 DPY19L2Q6NUT2 758 aa23.11■■□□□ 1.29
CIRBP-227ENST00000590188 CWC25Q9NXE8 425 aaPredicted RBP23.11■■□□□ 1.29
CIRBP-227ENST00000590188 IARSP41252 1262 aaKnown RBP23.1■■□□□ 1.29
CIRBP-227ENST00000590188 FLIIQ13045 1269 aa23.1■■□□□ 1.29
CIRBP-227ENST00000590188 CC2D2BQ6DHV5 1058 aa23.1■■□□□ 1.29
CIRBP-227ENST00000590188 ZBTB38Q8NAP3 1195 aaPredicted RBP23.1■■□□□ 1.29
CIRBP-227ENST00000590188 CCDC191Q8NCU4 936 aa23.1■■□□□ 1.29
CIRBP-227ENST00000590188 ZNF521Q96K83 1311 aa23.09■■□□□ 1.29
CIRBP-227ENST00000590188 TAF1P21675 1872 aa23.09■■□□□ 1.29
CIRBP-227ENST00000590188 CCER2I3L3R5 266 aa23.09■■□□□ 1.29
CIRBP-227ENST00000590188 TOMM70O94826 608 aa23.09■■□□□ 1.29
CIRBP-227ENST00000590188 DDNO94850 711 aaPredicted RBP23.09■■□□□ 1.29
CIRBP-227ENST00000590188 GRAPQ13588 217 aa23.09■■□□□ 1.29
CIRBP-227ENST00000590188 GRAPLQ8TC17 118 aaPredicted RBP23.09■■□□□ 1.29
CIRBP-227ENST00000590188 TMX4Q9H1E5 349 aaPredicted RBP23.09■■□□□ 1.29
CIRBP-227ENST00000590188 ATP6V0A2Q9Y487 856 aa23.09■■□□□ 1.29
CIRBP-227ENST00000590188 IGKV5-2P06315 115 aa23.08■■□□□ 1.29
CIRBP-227ENST00000590188 FKBP5Q13451 457 aaPredicted RBP23.08■■□□□ 1.29
CIRBP-227ENST00000590188 CWF19L2Q2TBE0 894 aaKnown RBP23.08■■□□□ 1.29
CIRBP-227ENST00000590188 PSMD1Q99460 953 aa23.08■■□□□ 1.29
CIRBP-227ENST00000590188 ZNF541Q9H0D2 1346 aa23.08■■□□□ 1.28
CIRBP-227ENST00000590188 PCCAP05165 728 aaPredicted RBP23.07■■□□□ 1.28
CIRBP-227ENST00000590188 NEXNQ0ZGT2 675 aa23.07■■□□□ 1.28
CIRBP-227ENST00000590188 CELF1Q92879 486 aaKnown RBP23.07■■□□□ 1.28
CIRBP-227ENST00000590188 CCDC85AQ96PX6 553 aaPredicted RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms