RNA–Protein interactions for RNA: ENST00000590060.5

POLR2E-207, Transcript of RNA polymerase II subunit E, humanhuman

TSL 5

Gene POLR2E, Length 1,052 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-207ENST00000590060 NLRP10Q86W26 655 aa23.8■■□□□ 1.4
POLR2E-207ENST00000590060 BCORQ6W2J9 1755 aa23.8■■□□□ 1.4
POLR2E-207ENST00000590060 GNPATO15228 680 aa23.79■■□□□ 1.4
POLR2E-207ENST00000590060 CAMTA2O94983 1202 aa23.79■■□□□ 1.4
POLR2E-207ENST00000590060 GPTP24298 496 aa23.79■■□□□ 1.4
POLR2E-207ENST00000590060 KAZALD1Q96I82 304 aa23.79■■□□□ 1.4
POLR2E-207ENST00000590060 NOP58Q9Y2X3 529 aaKnown RBP23.79■■□□□ 1.4
POLR2E-207ENST00000590060 CDHR2Q9BYE9 1310 aa23.79■■□□□ 1.4
POLR2E-207ENST00000590060 C4BP0C0L5 1744 aa23.79■■□□□ 1.4
POLR2E-207ENST00000590060 G3BP1Q13283 466 aaKnown RBP eCLIP23.78■■□□□ 1.4
POLR2E-207ENST00000590060 CLEC4GQ6UXB4 293 aa23.78■■□□□ 1.4
POLR2E-207ENST00000590060 SCN7AQ01118 1682 aa23.78■■□□□ 1.4
POLR2E-207ENST00000590060 MYH14Q7Z406 1995 aaKnown RBP23.78■■□□□ 1.4
POLR2E-207ENST00000590060 CHMP3Q9Y3E7 222 aa23.77■■□□□ 1.4
POLR2E-207ENST00000590060 NUP98P52948 1817 aa23.77■■□□□ 1.4
POLR2E-207ENST00000590060 TAF1LQ8IZX4 1826 aa23.77■■□□□ 1.4
POLR2E-207ENST00000590060 ZNF34Q8IZ26 560 aa23.76■■□□□ 1.39
POLR2E-207ENST00000590060 TRMT112Q9UI30 125 aaKnown RBP23.76■■□□□ 1.39
POLR2E-207ENST00000590060 ZPR1O75312 459 aa23.75■■□□□ 1.39
POLR2E-207ENST00000590060 ADRA2BP18089 450 aa23.75■■□□□ 1.39
POLR2E-207ENST00000590060 KCNQ4P56696 695 aa23.75■■□□□ 1.39
POLR2E-207ENST00000590060 RHPN1Q8TCX5 695 aa23.75■■□□□ 1.39
POLR2E-207ENST00000590060 JARID2Q92833 1246 aaPredicted RBP23.75■■□□□ 1.39
POLR2E-207ENST00000590060 PLA2G12BQ9BX93 195 aa23.75■■□□□ 1.39
POLR2E-207ENST00000590060 BACH2Q9BYV9 841 aa23.75■■□□□ 1.39
POLR2E-207ENST00000590060 SMARCA5O60264 1052 aaPredicted RBP23.74■■□□□ 1.39
POLR2E-207ENST00000590060 BMP2KLQ5H9B9 411 aa23.74■■□□□ 1.39
POLR2E-207ENST00000590060 RTL5Q5HYW3 569 aaPredicted RBP23.74■■□□□ 1.39
POLR2E-207ENST00000590060 LMBR1LQ6UX01 489 aa23.74■■□□□ 1.39
POLR2E-207ENST00000590060 UTP14AQ9BVJ6 771 aaKnown RBP23.74■■□□□ 1.39
POLR2E-207ENST00000590060 BCL11AQ9H165 835 aa23.74■■□□□ 1.39
POLR2E-207ENST00000590060 EPHA10Q5JZY3 1008 aa23.73■■□□□ 1.39
POLR2E-207ENST00000590060 CLASRPQ8N2M8 674 aaKnown RBP23.73■■□□□ 1.39
POLR2E-207ENST00000590060 COPRSQ9NQ92 184 aa23.73■■□□□ 1.39
POLR2E-207ENST00000590060 NARFQ9UHQ1 456 aa23.73■■□□□ 1.39
POLR2E-207ENST00000590060 NIP7Q9Y221 180 aaKnown RBP eCLIP23.73■■□□□ 1.39
POLR2E-207ENST00000590060 FOXO4P98177 505 aa23.72■■□□□ 1.39
POLR2E-207ENST00000590060 POTEAQ6S8J7 498 aa23.72■■□□□ 1.39
POLR2E-207ENST00000590060 GPATCH3Q96I76 525 aa23.72■■□□□ 1.39
POLR2E-207ENST00000590060 RGS17Q9UGC6 210 aaPredicted RBP23.72■■□□□ 1.39
POLR2E-207ENST00000590060 SH3TC1Q8TE82 1336 aa23.72■■□□□ 1.39
POLR2E-207ENST00000590060 UBN2Q6ZU65 1347 aa23.71■■□□□ 1.39
POLR2E-207ENST00000590060 EIF5BO60841 1220 aaKnown RBP23.71■■□□□ 1.39
POLR2E-207ENST00000590060 TRAPPC3LQ5T215 181 aa23.71■■□□□ 1.39
POLR2E-207ENST00000590060 PLEKHM2Q8IWE5 1019 aa23.71■■□□□ 1.39
POLR2E-207ENST00000590060 FAM89AQ96GI7 184 aa23.71■■□□□ 1.39
POLR2E-207ENST00000590060 AOX1Q06278 1338 aa23.7■■□□□ 1.38
POLR2E-207ENST00000590060 IRS4O14654 1257 aaPredicted RBP23.7■■□□□ 1.38
POLR2E-207ENST00000590060 PLSCR1O15162 318 aa23.7■■□□□ 1.38
POLR2E-207ENST00000590060 APBA3O96018 575 aa23.7■■□□□ 1.38
POLR2E-207ENST00000590060 RFC4P35249 363 aa23.7■■□□□ 1.38
POLR2E-207ENST00000590060 CCDC57Q2TAC2 916 aa23.7■■□□□ 1.38
POLR2E-207ENST00000590060 TAF7LQ5H9L4 462 aa23.7■■□□□ 1.38
POLR2E-207ENST00000590060 PA2G4Q9UQ80 394 aaKnown RBP23.7■■□□□ 1.38
POLR2E-207ENST00000590060 PDE8AO60658 829 aa23.69■■□□□ 1.38
POLR2E-207ENST00000590060 MX1P20591 662 aa23.69■■□□□ 1.38
POLR2E-207ENST00000590060 TXNRD1Q16881 649 aa23.69■■□□□ 1.38
POLR2E-207ENST00000590060 C8orf34Q49A92 452 aa23.69■■□□□ 1.38
POLR2E-207ENST00000590060 CTSWP56202 376 aa23.68■■□□□ 1.38
POLR2E-207ENST00000590060 TTC22Q5TAA0 569 aa23.68■■□□□ 1.38
POLR2E-207ENST00000590060 NYXQ9GZU5 481 aa23.68■■□□□ 1.38
POLR2E-207ENST00000590060 SIL1Q9H173 461 aa23.68■■□□□ 1.38
POLR2E-207ENST00000590060 OSBPL3Q9H4L5 887 aa23.68■■□□□ 1.38
POLR2E-207ENST00000590060 IL1RAPL2Q9NP60 686 aa23.68■■□□□ 1.38
POLR2E-207ENST00000590060 SSFA2P28290 1259 aa23.67■■□□□ 1.38
POLR2E-207ENST00000590060 IFIT5Q13325 482 aaKnown RBP23.67■■□□□ 1.38
POLR2E-207ENST00000590060 UPF2Q9HAU5 1272 aaKnown RBP23.67■■□□□ 1.38
POLR2E-207ENST00000590060 LRRC4BQ9NT99 713 aa23.67■■□□□ 1.38
POLR2E-207ENST00000590060 FBXO3Q9UK99 471 aa23.67■■□□□ 1.38
POLR2E-207ENST00000590060 RGPD3A6NKT7 1758 aaPredicted RBP23.67■■□□□ 1.38
POLR2E-207ENST00000590060 RGPD4Q7Z3J3 1758 aa23.67■■□□□ 1.38
POLR2E-207ENST00000590060 USP42Q9H9J4 1324 aaKnown RBP23.66■■□□□ 1.38
POLR2E-207ENST00000590060 PHF14O94880 888 aa23.66■■□□□ 1.38
POLR2E-207ENST00000590060 IFIT2P09913 472 aaKnown RBP23.66■■□□□ 1.38
POLR2E-207ENST00000590060 RFX5P48382 616 aaPredicted RBP23.66■■□□□ 1.38
POLR2E-207ENST00000590060 PTPN12Q05209 780 aaKnown RBP23.66■■□□□ 1.38
POLR2E-207ENST00000590060 SUSD4Q5VX71 490 aa23.66■■□□□ 1.38
POLR2E-207ENST00000590060 USPL1Q5W0Q7 1092 aa23.66■■□□□ 1.38
POLR2E-207ENST00000590060 C16orf71Q8IYS4 520 aaPredicted RBP23.66■■□□□ 1.38
POLR2E-207ENST00000590060 RBM19Q9Y4C8 960 aaKnown RBP23.66■■□□□ 1.38
POLR2E-207ENST00000590060 PDE1AP54750 535 aa23.65■■□□□ 1.38
POLR2E-207ENST00000590060 CASC1Q6TDU7 716 aa23.65■■□□□ 1.38
POLR2E-207ENST00000590060 ARHGEF1Q92888 912 aaKnown RBP23.65■■□□□ 1.38
POLR2E-207ENST00000590060 CIAO1O76071 339 aa23.64■■□□□ 1.37
POLR2E-207ENST00000590060 NTSR2O95665 410 aa23.64■■□□□ 1.37
POLR2E-207ENST00000590060 CSF1RP07333 972 aa23.64■■□□□ 1.37
POLR2E-207ENST00000590060 IL15P40933 162 aaPredicted RBP23.64■■□□□ 1.37
POLR2E-207ENST00000590060 SETDB2Q96T68 719 aa23.64■■□□□ 1.37
POLR2E-207ENST00000590060 LAMB2P55268 1798 aa23.64■■□□□ 1.37
POLR2E-207ENST00000590060 C4AP0C0L4 1744 aa23.64■■□□□ 1.37
POLR2E-207ENST00000590060 TNS1Q9HBL0 1735 aaKnown RBP23.64■■□□□ 1.37
POLR2E-207ENST00000590060 ANKRD18BA2A2Z9 1011 aa23.63■■□□□ 1.37
POLR2E-207ENST00000590060 FAM177BA6PVY3 158 aa23.63■■□□□ 1.37
POLR2E-207ENST00000590060 ERC2O15083 957 aa23.63■■□□□ 1.37
POLR2E-207ENST00000590060 GTF2E1P29083 439 aaPredicted RBP23.63■■□□□ 1.37
POLR2E-207ENST00000590060 OTUD7AQ8TE49 926 aaPredicted RBP23.63■■□□□ 1.37
POLR2E-207ENST00000590060 STAP2Q9UGK3 403 aa23.63■■□□□ 1.37
POLR2E-207ENST00000590060 TTC41PQ6P2S7 1318 aa23.62■■□□□ 1.37
POLR2E-207ENST00000590060 SALL3Q9BXA9 1300 aa23.62■■□□□ 1.37
POLR2E-207ENST00000590060 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms