RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 GTF2E1P29083 439 aaPredicted RBP28.53■■■□□ 2.16
R3HDM4-205ENST00000589445 ST5P78524 1137 aa28.53■■■□□ 2.16
R3HDM4-205ENST00000589445 NLRP10Q86W26 655 aa28.53■■■□□ 2.16
R3HDM4-205ENST00000589445 NYXQ9GZU5 481 aa28.53■■■□□ 2.16
R3HDM4-205ENST00000589445 RCAN3Q9UKA8 241 aa28.53■■■□□ 2.16
R3HDM4-205ENST00000589445 SUSD4Q5VX71 490 aa28.52■■■□□ 2.16
R3HDM4-205ENST00000589445 PRR5LQ6MZQ0 368 aa28.52■■■□□ 2.16
R3HDM4-205ENST00000589445 PPP1R42Q7Z4L9 355 aa28.52■■■□□ 2.16
R3HDM4-205ENST00000589445 ISCA1Q9BUE6 129 aa28.52■■■□□ 2.16
R3HDM4-205ENST00000589445 DLEC1Q9Y238 1755 aa28.52■■■□□ 2.16
R3HDM4-205ENST00000589445 ABCC12Q96J65 1359 aa28.51■■■□□ 2.16
R3HDM4-205ENST00000589445 CACNA1SQ13698 1873 aa28.51■■■□□ 2.15
R3HDM4-205ENST00000589445 NUTM1Q86Y26 1132 aa28.51■■■□□ 2.15
R3HDM4-205ENST00000589445 NTSR2O95665 410 aa28.5■■■□□ 2.15
R3HDM4-205ENST00000589445 CWF19L2Q2TBE0 894 aaKnown RBP28.5■■■□□ 2.15
R3HDM4-205ENST00000589445 UTP14AQ9BVJ6 771 aaKnown RBP28.5■■■□□ 2.15
R3HDM4-205ENST00000589445 BRPF1P55201 1214 aaPredicted RBP28.49■■■□□ 2.15
R3HDM4-205ENST00000589445 TPTE2Q6XPS3 522 aa28.49■■■□□ 2.15
R3HDM4-205ENST00000589445 CWC25Q9NXE8 425 aaPredicted RBP28.49■■■□□ 2.15
R3HDM4-205ENST00000589445 TRMT112Q9UI30 125 aaKnown RBP28.49■■■□□ 2.15
R3HDM4-205ENST00000589445 API5Q9BZZ5 524 aaKnown RBP28.48■■■□□ 2.15
R3HDM4-205ENST00000589445 NEURL1BA8MQ27 555 aa28.47■■■□□ 2.15
R3HDM4-205ENST00000589445 IGKV5-2P06315 115 aa28.47■■■□□ 2.15
R3HDM4-205ENST00000589445 ERFEQ4G0M1 354 aa28.47■■■□□ 2.15
R3HDM4-205ENST00000589445 RTL5Q5HYW3 569 aaPredicted RBP28.47■■■□□ 2.15
R3HDM4-205ENST00000589445 MYH3P11055 1940 aa28.47■■■□□ 2.15
R3HDM4-205ENST00000589445 IPO8O15397 1037 aaKnown RBP28.46■■■□□ 2.15
R3HDM4-205ENST00000589445 CCDC191Q8NCU4 936 aa28.46■■■□□ 2.15
R3HDM4-205ENST00000589445 LINS1Q8NG48 757 aa28.46■■■□□ 2.15
R3HDM4-205ENST00000589445 SH3TC1Q8TE82 1336 aa28.45■■■□□ 2.15
R3HDM4-205ENST00000589445 ZKSCAN2Q63HK3 967 aa28.45■■■□□ 2.14
R3HDM4-205ENST00000589445 RNF123Q5XPI4 1314 aa28.44■■■□□ 2.14
R3HDM4-205ENST00000589445 BRCA1P38398 1863 aaKnown RBP28.44■■■□□ 2.14
R3HDM4-205ENST00000589445 SRCIN1Q9C0H9 1055 aa28.44■■■□□ 2.14
R3HDM4-205ENST00000589445 CD2APQ9Y5K6 639 aa28.44■■■□□ 2.14
R3HDM4-205ENST00000589445 TRIM28Q13263 835 aaKnown RBP28.43■■■□□ 2.14
R3HDM4-205ENST00000589445 BEND3Q5T5X7 828 aa28.43■■■□□ 2.14
R3HDM4-205ENST00000589445 NLGN2Q8NFZ4 835 aa28.43■■■□□ 2.14
R3HDM4-205ENST00000589445 RIC1Q4ADV7 1423 aa28.43■■■□□ 2.14
R3HDM4-205ENST00000589445 TRIM27P14373 513 aa28.42■■■□□ 2.14
R3HDM4-205ENST00000589445 ATF7IPQ6VMQ6 1270 aa28.42■■■□□ 2.14
R3HDM4-205ENST00000589445 CLUAP1Q96AJ1 413 aa28.42■■■□□ 2.14
R3HDM4-205ENST00000589445 FAM89AQ96GI7 184 aa28.42■■■□□ 2.14
R3HDM4-205ENST00000589445 TNNQ9UQP3 1299 aa28.42■■■□□ 2.14
R3HDM4-205ENST00000589445 ARHGAP45Q92619 1136 aa28.41■■■□□ 2.14
R3HDM4-205ENST00000589445 JARID2Q92833 1246 aaPredicted RBP28.41■■■□□ 2.14
R3HDM4-205ENST00000589445 ABCC4O15439 1325 aa28.41■■■□□ 2.14
R3HDM4-205ENST00000589445 GCKRQ14397 625 aa28.4■■■□□ 2.14
R3HDM4-205ENST00000589445 FTSJ3Q8IY81 847 aaKnown RBP28.4■■■□□ 2.14
R3HDM4-205ENST00000589445 SYNE4Q8N205 404 aa28.4■■■□□ 2.14
R3HDM4-205ENST00000589445 BRIP1Q9BX63 1249 aa28.4■■■□□ 2.14
R3HDM4-205ENST00000589445 UBE3BQ7Z3V4 1068 aa28.39■■■□□ 2.14
R3HDM4-205ENST00000589445 ZBTB38Q8NAP3 1195 aaPredicted RBP28.39■■■□□ 2.14
R3HDM4-205ENST00000589445 WWC3Q9ULE0 1092 aa28.39■■■□□ 2.14
R3HDM4-205ENST00000589445 ALDH1L1O75891 902 aa28.38■■■□□ 2.13
R3HDM4-205ENST00000589445 PCCAP05165 728 aaPredicted RBP28.38■■■□□ 2.13
R3HDM4-205ENST00000589445 HCLS1P14317 486 aaPredicted RBP28.38■■■□□ 2.13
R3HDM4-205ENST00000589445 CHRNA5P30532 468 aa28.38■■■□□ 2.13
R3HDM4-205ENST00000589445 PDE6BP35913 854 aa28.38■■■□□ 2.13
R3HDM4-205ENST00000589445 C2CD5Q86YS7 1000 aa28.38■■■□□ 2.13
R3HDM4-205ENST00000589445 CCT4P50991 539 aaKnown RBP28.37■■■□□ 2.13
R3HDM4-205ENST00000589445 IRS4O14654 1257 aaPredicted RBP28.36■■■□□ 2.13
R3HDM4-205ENST00000589445 DPEP1P16444 411 aa28.36■■■□□ 2.13
R3HDM4-205ENST00000589445 SPEF2Q9C093 1822 aa28.35■■■□□ 2.13
R3HDM4-205ENST00000589445 A0A0G2JLW4 131 aa28.35■■■□□ 2.13
R3HDM4-205ENST00000589445 GPR162Q16538 588 aa28.35■■■□□ 2.13
R3HDM4-205ENST00000589445 C9orf78Q9NZ63 289 aaPredicted RBP28.35■■■□□ 2.13
R3HDM4-205ENST00000589445 H0YIN7 160 aa28.34■■■□□ 2.13
R3HDM4-205ENST00000589445 GRM8O00222 908 aa28.34■■■□□ 2.13
R3HDM4-205ENST00000589445 PLIN1O60240 522 aa28.34■■■□□ 2.13
R3HDM4-205ENST00000589445 TGFB2P61812 414 aa28.34■■■□□ 2.13
R3HDM4-205ENST00000589445 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.34■■■□□ 2.13
R3HDM4-205ENST00000589445 C3orf67Q6ZVT6 689 aa28.33■■■□□ 2.13
R3HDM4-205ENST00000589445 CDHR2Q9BYE9 1310 aa28.33■■■□□ 2.13
R3HDM4-205ENST00000589445 DZIP1LQ8IYY4 767 aaKnown RBP28.32■■■□□ 2.12
R3HDM4-205ENST00000589445 PELP1Q8IZL8 1130 aaKnown RBP28.32■■■□□ 2.12
R3HDM4-205ENST00000589445 RPGRQ92834 1020 aaKnown RBP28.32■■■□□ 2.12
R3HDM4-205ENST00000589445 NLRP3Q96P20 1036 aa28.32■■■□□ 2.12
R3HDM4-205ENST00000589445 TAF1P21675 1872 aa28.32■■■□□ 2.12
R3HDM4-205ENST00000589445 HSP90B1P14625 803 aaKnown RBP28.31■■■□□ 2.12
R3HDM4-205ENST00000589445 ZNF622Q969S3 477 aaKnown RBP eCLIP28.31■■■□□ 2.12
R3HDM4-205ENST00000589445 ARFGEF1Q9Y6D6 1849 aa28.31■■■□□ 2.12
R3HDM4-205ENST00000589445 SLC10A5Q5PT55 438 aa28.3■■■□□ 2.12
R3HDM4-205ENST00000589445 TMEM57Q8N5G2 664 aa28.3■■■□□ 2.12
R3HDM4-205ENST00000589445 H7C1W4 665 aa28.29■■■□□ 2.12
R3HDM4-205ENST00000589445 ITPRIPQ8IWB1 547 aa28.29■■■□□ 2.12
R3HDM4-205ENST00000589445 PANK1Q8TE04 598 aa28.29■■■□□ 2.12
R3HDM4-205ENST00000589445 PDZRN3Q9UPQ7 1066 aa28.29■■■□□ 2.12
R3HDM4-205ENST00000589445 PDE8AO60658 829 aa28.28■■■□□ 2.12
R3HDM4-205ENST00000589445 SRGNP10124 158 aa28.28■■■□□ 2.12
R3HDM4-205ENST00000589445 RLBP1P12271 317 aa28.28■■■□□ 2.12
R3HDM4-205ENST00000589445 INTS3Q68E01 1043 aaKnown RBP28.28■■■□□ 2.12
R3HDM4-205ENST00000589445 MS4A1P11836 297 aa28.27■■■□□ 2.12
R3HDM4-205ENST00000589445 NPR1P16066 1061 aa28.27■■■□□ 2.12
R3HDM4-205ENST00000589445 CASP7P55210 303 aa28.27■■■□□ 2.12
R3HDM4-205ENST00000589445 SLX4Q8IY92 1834 aa28.27■■■□□ 2.12
R3HDM4-205ENST00000589445 NBPF7P0C2Y1 421 aaPredicted RBP28.26■■■□□ 2.11
R3HDM4-205ENST00000589445 RRP1P56182 461 aaKnown RBP28.26■■■□□ 2.11
R3HDM4-205ENST00000589445 CTSWP56202 376 aa28.26■■■□□ 2.11
R3HDM4-205ENST00000589445 CRY2Q49AN0 593 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms