RNA–Protein interactions for RNA: ENST00000589333.2

UCA1-202, Transcript of urothelial cancer associated 1, humanhuman

TSL 3

Gene UCA1, Length 433 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-202ENST00000589333 VAMP4O75379 141 aa8.13□□□□□ -1.11
UCA1-202ENST00000589333 GIGYF1O75420 1035 aaPredicted RBP8.13□□□□□ -1.11
UCA1-202ENST00000589333 TRIM37O94972 964 aa8.13□□□□□ -1.11
UCA1-202ENST00000589333 CT47B1P0C2W7 299 aaPredicted RBP8.13□□□□□ -1.11
UCA1-202ENST00000589333 PROX2Q3B8N5 592 aa8.13□□□□□ -1.11
UCA1-202ENST00000589333 TTC5Q8N0Z6 440 aa8.13□□□□□ -1.11
UCA1-202ENST00000589333 VSIG10Q8N0Z9 540 aa8.13□□□□□ -1.11
UCA1-202ENST00000589333 FMNL2Q96PY5 1086 aa8.13□□□□□ -1.11
UCA1-202ENST00000589333 LARP6Q9BRS8 491 aaKnown RBP8.13□□□□□ -1.11
UCA1-202ENST00000589333 EMILIN3Q9NT22 766 aa8.13□□□□□ -1.11
UCA1-202ENST00000589333 SRCAPQ6ZRS2 3230 aa8.12□□□□□ -1.11
UCA1-202ENST00000589333 LOC102724428A0A0B4J2F2 783 aa8.12□□□□□ -1.11
UCA1-202ENST00000589333 GTPBP6O43824 516 aaPredicted RBP8.12□□□□□ -1.11
UCA1-202ENST00000589333 COL9A1P20849 921 aa8.12□□□□□ -1.11
UCA1-202ENST00000589333 SIK1P57059 783 aa8.12□□□□□ -1.11
UCA1-202ENST00000589333 ITPK1Q13572 414 aa8.12□□□□□ -1.11
UCA1-202ENST00000589333 TWISTNBQ3B726 338 aaPredicted RBP8.12□□□□□ -1.11
UCA1-202ENST00000589333 LRP10Q7Z4F1 713 aa8.12□□□□□ -1.11
UCA1-202ENST00000589333 MRPL50Q8N5N7 158 aaKnown RBP8.12□□□□□ -1.11
UCA1-202ENST00000589333 SMARCC1Q92922 1105 aaPredicted RBP8.12□□□□□ -1.11
UCA1-202ENST00000589333 ZDHHC16Q969W1 377 aa8.12□□□□□ -1.11
UCA1-202ENST00000589333 PTCD1O75127 700 aaKnown RBP8.11□□□□□ -1.11
UCA1-202ENST00000589333 COL24A1Q17RW2 1714 aa8.11□□□□□ -1.11
UCA1-202ENST00000589333 CASZ1Q86V15 1759 aa8.1□□□□□ -1.11
UCA1-202ENST00000589333 ERBB4Q15303 1308 aa8.1□□□□□ -1.11
UCA1-202ENST00000589333 CNTNAP4Q9C0A0 1308 aa8.1□□□□□ -1.11
UCA1-202ENST00000589333 ELL2O00472 640 aaPredicted RBP8.1□□□□□ -1.11
UCA1-202ENST00000589333 PLSCR1O15162 318 aa8.1□□□□□ -1.11
UCA1-202ENST00000589333 SNRPA1P09661 255 aaKnown RBP8.1□□□□□ -1.11
UCA1-202ENST00000589333 RARSP54136 660 aaKnown RBP8.1□□□□□ -1.11
UCA1-202ENST00000589333 PDIA6Q15084 440 aa8.1□□□□□ -1.11
UCA1-202ENST00000589333 DNAJC10Q8IXB1 793 aa8.1□□□□□ -1.11
UCA1-202ENST00000589333 LINC00116Q8NCU8 138 aa8.1□□□□□ -1.11
UCA1-202ENST00000589333 ZNF428Q96B54 188 aa8.1□□□□□ -1.11
UCA1-202ENST00000589333 LRRC4BQ9NT99 713 aa8.1□□□□□ -1.11
UCA1-202ENST00000589333 USP16Q9Y5T5 823 aa8.1□□□□□ -1.11
UCA1-202ENST00000589333 PXDNLA1KZ92 1463 aa8.1□□□□□ -1.11
UCA1-202ENST00000589333 RNF123Q5XPI4 1314 aa8.09□□□□□ -1.11
UCA1-202ENST00000589333 GOLGA8CPA6NN73 597 aa8.09□□□□□ -1.11
UCA1-202ENST00000589333 NBPF26B4DH59 902 aa8.09□□□□□ -1.11
UCA1-202ENST00000589333 CYP19A1P11511 503 aaPredicted RBP8.09□□□□□ -1.11
UCA1-202ENST00000589333 PDE4AP27815 886 aa8.09□□□□□ -1.11
UCA1-202ENST00000589333 BRPF1P55201 1214 aaPredicted RBP8.09□□□□□ -1.11
UCA1-202ENST00000589333 ALDH1L2Q3SY69 923 aa8.09□□□□□ -1.11
UCA1-202ENST00000589333 HDGFL1Q5TGJ6 251 aa8.09□□□□□ -1.11
UCA1-202ENST00000589333 NBPF14Q5TI25 921 aa8.09□□□□□ -1.11
UCA1-202ENST00000589333 NBPF10Q6P3W6 841 aaKnown RBP8.09□□□□□ -1.11
UCA1-202ENST00000589333 NBPF15Q8N660 670 aa8.09□□□□□ -1.11
UCA1-202ENST00000589333 SSH1Q8WYL5 1049 aa8.09□□□□□ -1.11
UCA1-202ENST00000589333 CCNL1Q9UK58 526 aaPredicted RBP8.09□□□□□ -1.11
UCA1-202ENST00000589333 PCDHGA10Q9Y5H3 936 aa8.09□□□□□ -1.11
UCA1-202ENST00000589333 NUP98P52948 1817 aa8.08□□□□□ -1.12
UCA1-202ENST00000589333 AFDNP55196 1824 aaKnown RBP8.08□□□□□ -1.12
UCA1-202ENST00000589333 ATP6V1AP38606 617 aa8.08□□□□□ -1.12
UCA1-202ENST00000589333 BCAMP50895 628 aa8.08□□□□□ -1.12
UCA1-202ENST00000589333 KCNQ4P56696 695 aa8.08□□□□□ -1.12
UCA1-202ENST00000589333 TXNRD1Q16881 649 aa8.08□□□□□ -1.12
UCA1-202ENST00000589333 PROSER3Q2NL68 480 aa8.08□□□□□ -1.12
UCA1-202ENST00000589333 SLC27A3Q5K4L6 730 aa8.08□□□□□ -1.12
UCA1-202ENST00000589333 DDX27Q96GQ7 796 aaKnown RBP8.08□□□□□ -1.12
UCA1-202ENST00000589333 CAMKK2Q96RR4 588 aa8.08□□□□□ -1.12
UCA1-202ENST00000589333 BCL2L13Q9BXK5 485 aa8.08□□□□□ -1.12
UCA1-202ENST00000589333 CHPF2Q9P2E5 772 aa8.08□□□□□ -1.12
UCA1-202ENST00000589333 RCAN3Q9UKA8 241 aa8.08□□□□□ -1.12
UCA1-202ENST00000589333 ZBTB1Q9Y2K1 713 aa8.08□□□□□ -1.12
UCA1-202ENST00000589333 COL15A1P39059 1388 aa8.08□□□□□ -1.12
UCA1-202ENST00000589333 LAMB2P55268 1798 aa8.07□□□□□ -1.12
UCA1-202ENST00000589333 APBA3O96018 575 aa8.07□□□□□ -1.12
UCA1-202ENST00000589333 CRKLP46109 303 aaKnown RBP8.07□□□□□ -1.12
UCA1-202ENST00000589333 PIP4K2AP48426 406 aaPredicted RBP8.07□□□□□ -1.12
UCA1-202ENST00000589333 IFFO2Q5TF58 517 aa8.07□□□□□ -1.12
UCA1-202ENST00000589333 INTS5Q6P9B9 1019 aaKnown RBP8.07□□□□□ -1.12
UCA1-202ENST00000589333 AMIGO3Q86WK7 504 aa8.07□□□□□ -1.12
UCA1-202ENST00000589333 DDX21Q9NR30 783 aaKnown RBP eCLIP8.07□□□□□ -1.12
UCA1-202ENST00000589333 ADCY9O60503 1353 aa8.07□□□□□ -1.12
UCA1-202ENST00000589333 KIF16BQ96L93 1317 aa8.06□□□□□ -1.12
UCA1-202ENST00000589333 TCERG1O14776 1098 aaKnown RBP8.06□□□□□ -1.12
UCA1-202ENST00000589333 BCAR3O75815 825 aa8.06□□□□□ -1.12
UCA1-202ENST00000589333 ANXA1P04083 346 aa8.06□□□□□ -1.12
UCA1-202ENST00000589333 A1BGP04217 495 aa8.06□□□□□ -1.12
UCA1-202ENST00000589333 EIF2S2P20042 333 aaKnown RBP8.06□□□□□ -1.12
UCA1-202ENST00000589333 MAP3K9P80192 1104 aa8.06□□□□□ -1.12
UCA1-202ENST00000589333 MFSD10Q14728 455 aa8.06□□□□□ -1.12
UCA1-202ENST00000589333 EZH2Q15910 746 aaKnown RBP8.06□□□□□ -1.12
UCA1-202ENST00000589333 CCDC30Q5VVM6 783 aa8.06□□□□□ -1.12
UCA1-202ENST00000589333 G2E3Q7L622 706 aa8.06□□□□□ -1.12
UCA1-202ENST00000589333 DEFB132Q7Z7B7 95 aa8.06□□□□□ -1.12
UCA1-202ENST00000589333 NECTIN2Q92692 538 aa8.06□□□□□ -1.12
UCA1-202ENST00000589333 TEX13AQ9BXU3 409 aaPredicted RBP8.06□□□□□ -1.12
UCA1-202ENST00000589333 SMC4Q9NTJ3 1288 aa8.06□□□□□ -1.12
UCA1-202ENST00000589333 CCDC87Q9NVE4 849 aa8.06□□□□□ -1.12
UCA1-202ENST00000589333 DBF4Q9UBU7 674 aaPredicted RBP8.06□□□□□ -1.12
UCA1-202ENST00000589333 NRXN2Q9P2S2 1712 aa8.06□□□□□ -1.12
UCA1-202ENST00000589333 ATP10DQ9P241 1426 aa8.05□□□□□ -1.12
UCA1-202ENST00000589333 CENPBP07199 599 aaPredicted RBP8.05□□□□□ -1.12
UCA1-202ENST00000589333 BAG6P46379 1132 aa8.05□□□□□ -1.12
UCA1-202ENST00000589333 EIF5P55010 431 aaKnown RBP8.05□□□□□ -1.12
UCA1-202ENST00000589333 EN1Q05925 392 aaPredicted RBP8.05□□□□□ -1.12
UCA1-202ENST00000589333 FLIIQ13045 1269 aa8.05□□□□□ -1.12
UCA1-202ENST00000589333 ZNF827Q17R98 1081 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms