RNA–Protein interactions for RNA: ENST00000589235.5

CIRBP-222, Transcript of cold inducible RNA binding protein, human

APPRIS ALT1 TSL 2 BASIC

Gene CIRBP, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-222	ENST00000589235	RIC1	Q4ADV7	1423 aa		27.67	■■■□□ 2.02
CIRBP-222	ENST00000589235	RNF123	Q5XPI4	1314 aa		27.67	■■■□□ 2.02
CIRBP-222	ENST00000589235	HOXA10	P31260	410 aa	Predicted RBP	27.66	■■■□□ 2.02
CIRBP-222	ENST00000589235	TMX4	Q9H1E5	349 aa	Predicted RBP	27.66	■■■□□ 2.02
CIRBP-222	ENST00000589235	NUP98	P52948	1817 aa		27.66	■■■□□ 2.02
CIRBP-222	ENST00000589235	ARFGEF2	Q9Y6D5	1785 aa		27.65	■■■□□ 2.02
CIRBP-222	ENST00000589235	APAF1	O14727	1248 aa		27.65	■■■□□ 2.02
CIRBP-222	ENST00000589235	DBF4	Q9UBU7	674 aa	Predicted RBP	27.65	■■■□□ 2.02
CIRBP-222	ENST00000589235	CRAMP1	Q96RY5	1269 aa		27.64	■■■□□ 2.02
CIRBP-222	ENST00000589235	TIAM2	Q8IVF5	1701 aa		27.64	■■■□□ 2.01
CIRBP-222	ENST00000589235	GNAI1	P63096	354 aa		27.63	■■■□□ 2.01
CIRBP-222	ENST00000589235	KRT24	Q2M2I5	525 aa		27.63	■■■□□ 2.01
CIRBP-222	ENST00000589235	SLC10A5	Q5PT55	438 aa		27.63	■■■□□ 2.01
CIRBP-222	ENST00000589235	CHPF2	Q9P2E5	772 aa		27.63	■■■□□ 2.01
CIRBP-222	ENST00000589235	TCIRG1	Q13488	830 aa		27.62	■■■□□ 2.01
CIRBP-222	ENST00000589235	SYNE4	Q8N205	404 aa		27.62	■■■□□ 2.01
CIRBP-222	ENST00000589235	CHMP4A	Q9BY43	222 aa		27.62	■■■□□ 2.01
CIRBP-222	ENST00000589235	ZNF277	Q9NRM2	450 aa	Predicted RBP	27.62	■■■□□ 2.01
CIRBP-222	ENST00000589235	IFT57	Q9NWB7	429 aa		27.62	■■■□□ 2.01
CIRBP-222	ENST00000589235	DUSP27	Q5VZP5	1158 aa		27.61	■■■□□ 2.01
CIRBP-222	ENST00000589235	PSMD1	Q99460	953 aa		27.61	■■■□□ 2.01
CIRBP-222	ENST00000589235	MBIP	Q9NS73	344 aa		27.61	■■■□□ 2.01
CIRBP-222	ENST00000589235	HYPK	Q9NX55	129 aa		27.61	■■■□□ 2.01
CIRBP-222	ENST00000589235	CCDC88A	Q3V6T2	1871 aa		27.61	■■■□□ 2.01
CIRBP-222	ENST00000589235	CACNA1S	Q13698	1873 aa		27.6	■■■□□ 2.01
CIRBP-222	ENST00000589235	IQCA1L	A6NCM1	817 aa		27.6	■■■□□ 2.01
CIRBP-222	ENST00000589235	DDN	O94850	711 aa	Predicted RBP	27.6	■■■□□ 2.01
CIRBP-222	ENST00000589235	IARS	P41252	1262 aa	Known RBP	27.6	■■■□□ 2.01
CIRBP-222	ENST00000589235	PLBD2	Q8NHP8	589 aa		27.6	■■■□□ 2.01
CIRBP-222	ENST00000589235	OLFM4	Q6UX06	510 aa		27.59	■■■□□ 2.01
CIRBP-222	ENST00000589235	ANKRD13D	Q6ZTN6	518 aa		27.59	■■■□□ 2.01
CIRBP-222	ENST00000589235	NLRP10	Q86W26	655 aa		27.59	■■■□□ 2.01
CIRBP-222	ENST00000589235	JDP2	Q8WYK2	163 aa		27.59	■■■□□ 2.01
CIRBP-222	ENST00000589235	TRMT112	Q9UI30	125 aa	Known RBP	27.59	■■■□□ 2.01
CIRBP-222	ENST00000589235	POTEC	B2RU33	542 aa		27.58	■■■□□ 2.01
CIRBP-222	ENST00000589235	PPEF1	O14829	653 aa	Predicted RBP	27.58	■■■□□ 2.01
CIRBP-222	ENST00000589235	ZNF853	P0CG23	659 aa		27.58	■■■□□ 2.01
CIRBP-222	ENST00000589235	DICER1	Q9UPY3	1922 aa	Known RBP	27.57	■■■□□ 2
CIRBP-222	ENST00000589235	WDR90	Q96KV7	1748 aa		27.57	■■■□□ 2
CIRBP-222	ENST00000589235	SH3TC1	Q8TE82	1336 aa		27.56	■■■□□ 2
CIRBP-222	ENST00000589235	DNAJC5G	Q8N7S2	189 aa		27.54	■■■□□ 2
CIRBP-222	ENST00000589235	L3MBTL3	Q96JM7	780 aa	Predicted RBP	27.54	■■■□□ 2
CIRBP-222	ENST00000589235	ZNF316	A6NFI3	1004 aa	Predicted RBP	27.53	■■■□□ 2
CIRBP-222	ENST00000589235	TCERG1	O14776	1098 aa	Known RBP	27.53	■■■□□ 2
CIRBP-222	ENST00000589235	ANP32C	O43423	234 aa		27.53	■■■□□ 2
CIRBP-222	ENST00000589235	BBOX1	O75936	387 aa		27.53	■■■□□ 2
CIRBP-222	ENST00000589235	FZD9	O00144	591 aa		27.52	■■■□□ 2
CIRBP-222	ENST00000589235	EIF6	P56537	245 aa	Known RBP	27.52	■■■□□ 2
CIRBP-222	ENST00000589235	C3orf67	Q6ZVT6	689 aa		27.52	■■■□□ 2
CIRBP-222	ENST00000589235	DDX46	Q7L014	1031 aa	Known RBP	27.52	■■■□□ 2
CIRBP-222	ENST00000589235	HCLS1	P14317	486 aa	Predicted RBP	27.51	■■□□□ 1.99
CIRBP-222	ENST00000589235	GOLGA2	Q08379	1002 aa		27.51	■■□□□ 1.99
CIRBP-222	ENST00000589235	CHADL	Q6NUI6	762 aa		27.51	■■□□□ 1.99
CIRBP-222	ENST00000589235	VPS33B	Q9H267	617 aa		27.51	■■□□□ 1.99
CIRBP-222	ENST00000589235	ATP6V0A2	Q9Y487	856 aa		27.51	■■□□□ 1.99
CIRBP-222	ENST00000589235	ELL2	O00472	640 aa	Predicted RBP	27.5	■■□□□ 1.99
CIRBP-222	ENST00000589235	RIC3	Q7Z5B4	369 aa		27.5	■■□□□ 1.99
CIRBP-222	ENST00000589235	LARGE2	Q8N3Y3	721 aa		27.5	■■□□□ 1.99
CIRBP-222	ENST00000589235	SUPT20H	Q8NEM7	779 aa		27.5	■■□□□ 1.99
CIRBP-222	ENST00000589235	GPC2	Q8N158	579 aa		27.49	■■□□□ 1.99
CIRBP-222	ENST00000589235	KLRG1	Q96E93	195 aa		27.49	■■□□□ 1.99
CIRBP-222	ENST00000589235	ISCA1	Q9BUE6	129 aa		27.49	■■□□□ 1.99
CIRBP-222	ENST00000589235	HACL1	Q9UJ83	578 aa		27.49	■■□□□ 1.99
CIRBP-222	ENST00000589235	ABCC4	O15439	1325 aa		27.48	■■□□□ 1.99
CIRBP-222	ENST00000589235	ZNF541	Q9H0D2	1346 aa		27.48	■■□□□ 1.99
CIRBP-222	ENST00000589235	CCDC30	Q5VVM6	783 aa		27.48	■■□□□ 1.99
CIRBP-222	ENST00000589235	SP8	Q8IXZ3	490 aa		27.48	■■□□□ 1.99
CIRBP-222	ENST00000589235	TAF1D	Q9H5J8	278 aa	Predicted RBP	27.48	■■□□□ 1.99
CIRBP-222	ENST00000589235	HSP90B1	P14625	803 aa	Known RBP	27.47	■■□□□ 1.99
CIRBP-222	ENST00000589235	HTRA3	P83110	453 aa		27.47	■■□□□ 1.99
CIRBP-222	ENST00000589235	TRIM28	Q13263	835 aa	Known RBP	27.47	■■□□□ 1.99
CIRBP-222	ENST00000589235	CCDC27	Q2M243	656 aa		27.47	■■□□□ 1.99
CIRBP-222	ENST00000589235	TMC4	Q7Z404	712 aa		27.47	■■□□□ 1.99
CIRBP-222	ENST00000589235	LDHD	Q86WU2	507 aa		27.47	■■□□□ 1.99
CIRBP-222	ENST00000589235	SNED1	Q8TER0	1413 aa		27.47	■■□□□ 1.99
CIRBP-222	ENST00000589235	ATP5J2-PTCD1	G3V325	749 aa		27.46	■■□□□ 1.99
CIRBP-222	ENST00000589235	GRAP	Q13588	217 aa		27.46	■■□□□ 1.99
CIRBP-222	ENST00000589235	NIM1K	Q8IY84	436 aa		27.46	■■□□□ 1.99
CIRBP-222	ENST00000589235	GRAPL	Q8TC17	118 aa	Predicted RBP	27.46	■■□□□ 1.99
CIRBP-222	ENST00000589235	MRS2	Q9HD23	443 aa		27.46	■■□□□ 1.99
CIRBP-222	ENST00000589235	DDX58	O95786	925 aa	Known RBP	27.45	■■□□□ 1.98
CIRBP-222	ENST00000589235	CCDC184	Q52MB2	194 aa		27.45	■■□□□ 1.98
CIRBP-222	ENST00000589235	PNMA8A	Q86V59	439 aa	Predicted RBP	27.45	■■□□□ 1.98
CIRBP-222	ENST00000589235	ANKRD36C	Q5JPF3	1778 aa		27.45	■■□□□ 1.98
CIRBP-222	ENST00000589235	PPIP5K2	O43314	1243 aa		27.44	■■□□□ 1.98
CIRBP-222	ENST00000589235	NCBP3	Q53F19	620 aa	Known RBP	27.44	■■□□□ 1.98
CIRBP-222	ENST00000589235	DPP8	Q6V1X1	898 aa	Predicted RBP	27.44	■■□□□ 1.98
CIRBP-222	ENST00000589235	MPND	Q8N594	471 aa		27.44	■■□□□ 1.98
CIRBP-222	ENST00000589235	C8orf58	Q8NAV2	365 aa		27.44	■■□□□ 1.98
CIRBP-222	ENST00000589235	FAM89A	Q96GI7	184 aa		27.44	■■□□□ 1.98
CIRBP-222	ENST00000589235	LMOD1	P29536	600 aa	Predicted RBP	27.43	■■□□□ 1.98
CIRBP-222	ENST00000589235	EPHX2	P34913	555 aa		27.43	■■□□□ 1.98
CIRBP-222	ENST00000589235	EAPP	Q56P03	285 aa	Predicted RBP	27.43	■■□□□ 1.98
CIRBP-222	ENST00000589235	PHAX	Q9H814	394 aa	Known RBP	27.43	■■□□□ 1.98
CIRBP-222	ENST00000589235	CLEC11A	Q9Y240	323 aa		27.43	■■□□□ 1.98
CIRBP-222	ENST00000589235	GJA3	Q9Y6H8	435 aa		27.43	■■□□□ 1.98
CIRBP-222	ENST00000589235	RTFDC1	Q9BY42	306 aa	Predicted RBP	27.42	■■□□□ 1.98
CIRBP-222	ENST00000589235	CEP350	Q5VT06	3117 aa		27.42	■■□□□ 1.98
CIRBP-222	ENST00000589235	SF3B3	Q15393	1217 aa	Known RBP	27.41	■■□□□ 1.98
CIRBP-222	ENST00000589235	WWC1	Q8IX03	1113 aa		27.41	■■□□□ 1.98

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