RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 PPP1R42Q7Z4L9 355 aa38.64■■■■□ 3.78
CAPNS1-206ENST00000588815 PROM2Q8N271 834 aa38.64■■■■□ 3.78
CAPNS1-206ENST00000588815 PNMA6EA0A0J9YXQ4 647 aa38.63■■■■□ 3.77
CAPNS1-206ENST00000588815 PARP10Q53GL7 1025 aa38.63■■■■□ 3.77
CAPNS1-206ENST00000588815 ZBTB38Q8NAP3 1195 aaPredicted RBP38.63■■■■□ 3.77
CAPNS1-206ENST00000588815 KAZALD1Q96I82 304 aa38.63■■■■□ 3.77
CAPNS1-206ENST00000588815 PDZRN3Q9UPQ7 1066 aa38.62■■■■□ 3.77
CAPNS1-206ENST00000588815 BICC1Q9H694 974 aaKnown RBP38.61■■■■□ 3.77
CAPNS1-206ENST00000588815 SRGAP3O43295 1099 aa38.6■■■■□ 3.77
CAPNS1-206ENST00000588815 NUCB1Q02818 461 aa38.6■■■■□ 3.77
CAPNS1-206ENST00000588815 TRAPPC3LQ5T215 181 aa38.6■■■■□ 3.77
CAPNS1-206ENST00000588815 CDHR2Q9BYE9 1310 aa38.6■■■■□ 3.77
CAPNS1-206ENST00000588815 RABL6Q3YEC7 729 aaPredicted RBP38.6■■■■□ 3.77
CAPNS1-206ENST00000588815 LAMB2P55268 1798 aa38.59■■■■□ 3.77
CAPNS1-206ENST00000588815 ZPR1O75312 459 aa38.59■■■■□ 3.77
CAPNS1-206ENST00000588815 SSFA2P28290 1259 aa38.59■■■■□ 3.77
CAPNS1-206ENST00000588815 GPTP24298 496 aa38.58■■■■□ 3.77
CAPNS1-206ENST00000588815 COL24A1Q17RW2 1714 aa38.58■■■■□ 3.77
CAPNS1-206ENST00000588815 ARHGEF1Q92888 912 aaKnown RBP38.57■■■■□ 3.76
CAPNS1-206ENST00000588815 PLA2G12BQ9BX93 195 aa38.57■■■■□ 3.76
CAPNS1-206ENST00000588815 UBN2Q6ZU65 1347 aa38.56■■■■□ 3.76
CAPNS1-206ENST00000588815 TUBGCP6Q96RT7 1819 aa38.55■■■■□ 3.76
CAPNS1-206ENST00000588815 RFC4P35249 363 aa38.54■■■■□ 3.76
CAPNS1-206ENST00000588815 CHD1LQ86WJ1 897 aa38.54■■■■□ 3.76
CAPNS1-206ENST00000588815 USP42Q9H9J4 1324 aaKnown RBP38.54■■■■□ 3.76
CAPNS1-206ENST00000588815 HSP90AB4PQ58FF6 505 aa38.54■■■■□ 3.76
CAPNS1-206ENST00000588815 ZBTB47Q9UFB7 747 aaPredicted RBP38.54■■■■□ 3.76
CAPNS1-206ENST00000588815 NIP7Q9Y221 180 aaKnown RBP eCLIP38.54■■■■□ 3.76
CAPNS1-206ENST00000588815 ANKRD45Q5TZF3 282 aa38.53■■■■□ 3.76
CAPNS1-206ENST00000588815 TRMT112Q9UI30 125 aaKnown RBP38.53■■■■□ 3.76
CAPNS1-206ENST00000588815 HSP90B1P14625 803 aaKnown RBP38.52■■■■□ 3.76
CAPNS1-206ENST00000588815 FOXO4P98177 505 aa38.51■■■■□ 3.76
CAPNS1-206ENST00000588815 SF3B2Q13435 895 aaKnown RBP38.51■■■■□ 3.76
CAPNS1-206ENST00000588815 EPHA10Q5JZY3 1008 aa38.51■■■■□ 3.76
CAPNS1-206ENST00000588815 USPL1Q5W0Q7 1092 aa38.51■■■■□ 3.76
CAPNS1-206ENST00000588815 NOP58Q9Y2X3 529 aaKnown RBP38.51■■■■□ 3.76
CAPNS1-206ENST00000588815 QSER1Q2KHR3 1735 aa38.51■■■■□ 3.75
CAPNS1-206ENST00000588815 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP38.5■■■■□ 3.75
CAPNS1-206ENST00000588815 RAB11FIP3O75154 756 aa38.5■■■■□ 3.75
CAPNS1-206ENST00000588815 JARID2Q92833 1246 aaPredicted RBP38.5■■■■□ 3.75
CAPNS1-206ENST00000588815 UTP14AQ9BVJ6 771 aaKnown RBP38.5■■■■□ 3.75
CAPNS1-206ENST00000588815 BCL2L12Q9HB09 334 aa38.5■■■■□ 3.75
CAPNS1-206ENST00000588815 DDX60Q8IY21 1712 aaKnown RBP38.49■■■■□ 3.75
CAPNS1-206ENST00000588815 AMIGO3Q86WK7 504 aa38.49■■■■□ 3.75
CAPNS1-206ENST00000588815 FAM89AQ96GI7 184 aa38.49■■■■□ 3.75
CAPNS1-206ENST00000588815 SH3TC1Q8TE82 1336 aa38.48■■■■□ 3.75
CAPNS1-206ENST00000588815 AKT1S1Q96B36 256 aa38.47■■■■□ 3.75
CAPNS1-206ENST00000588815 PHF14O94880 888 aa38.47■■■■□ 3.75
CAPNS1-206ENST00000588815 SUSD4Q5VX71 490 aa38.47■■■■□ 3.75
CAPNS1-206ENST00000588815 FLAD1Q8NFF5 587 aa38.47■■■■□ 3.75
CAPNS1-206ENST00000588815 CAMKK2Q96RR4 588 aa38.47■■■■□ 3.75
CAPNS1-206ENST00000588815 SURF6O75683 361 aaKnown RBP38.46■■■■□ 3.75
CAPNS1-206ENST00000588815 RTL5Q5HYW3 569 aaPredicted RBP38.46■■■■□ 3.75
CAPNS1-206ENST00000588815 LMBR1LQ6UX01 489 aa38.46■■■■□ 3.75
CAPNS1-206ENST00000588815 SRP68Q9UHB9 627 aaKnown RBP38.46■■■■□ 3.75
CAPNS1-206ENST00000588815 EXOC6BQ9Y2D4 811 aa38.46■■■■□ 3.75
CAPNS1-206ENST00000588815 BAG6P46379 1132 aa38.45■■■■□ 3.75
CAPNS1-206ENST00000588815 CASZ1Q86V15 1759 aa38.44■■■■□ 3.74
CAPNS1-206ENST00000588815 RGS3P49796 1198 aa38.44■■■■□ 3.74
CAPNS1-206ENST00000588815 CCDC125Q86Z20 511 aa38.44■■■■□ 3.74
CAPNS1-206ENST00000588815 LRRCC1Q9C099 1032 aa38.44■■■■□ 3.74
CAPNS1-206ENST00000588815 LNPKQ9C0E8 428 aa38.44■■■■□ 3.74
CAPNS1-206ENST00000588815 IRS4O14654 1257 aaPredicted RBP38.43■■■■□ 3.74
CAPNS1-206ENST00000588815 NTSR2O95665 410 aa38.43■■■■□ 3.74
CAPNS1-206ENST00000588815 COPRSQ9NQ92 184 aa38.43■■■■□ 3.74
CAPNS1-206ENST00000588815 PDE8AO60658 829 aa38.42■■■■□ 3.74
CAPNS1-206ENST00000588815 SMIM5Q71RC9 77 aa38.42■■■■□ 3.74
CAPNS1-206ENST00000588815 ERC1Q8IUD2 1116 aa38.42■■■■□ 3.74
CAPNS1-206ENST00000588815 SETDB2Q96T68 719 aa38.42■■■■□ 3.74
CAPNS1-206ENST00000588815 NYXQ9GZU5 481 aa38.42■■■■□ 3.74
CAPNS1-206ENST00000588815 CSF1RP07333 972 aa38.41■■■■□ 3.74
CAPNS1-206ENST00000588815 TBC1D9BQ66K14 1250 aa38.41■■■■□ 3.74
CAPNS1-206ENST00000588815 TFCP2L1Q9NZI6 479 aa38.41■■■■□ 3.74
CAPNS1-206ENST00000588815 RFX5P48382 616 aaPredicted RBP38.4■■■■□ 3.74
CAPNS1-206ENST00000588815 SKAP1Q86WV1 359 aa38.4■■■■□ 3.74
CAPNS1-206ENST00000588815 KIF1BPQ96EK5 621 aa38.4■■■■□ 3.74
CAPNS1-206ENST00000588815 PDE4AP27815 886 aa38.38■■■■□ 3.73
CAPNS1-206ENST00000588815 EN1Q05925 392 aaPredicted RBP38.38■■■■□ 3.73
CAPNS1-206ENST00000588815 ZNF827Q17R98 1081 aa38.38■■■■□ 3.73
CAPNS1-206ENST00000588815 EZH2Q15910 746 aaKnown RBP38.37■■■■□ 3.73
CAPNS1-206ENST00000588815 CTSWP56202 376 aa38.36■■■■□ 3.73
CAPNS1-206ENST00000588815 G3BP1Q13283 466 aaKnown RBP eCLIP38.36■■■■□ 3.738e-8■■■■□ 23.7
CAPNS1-206ENST00000588815 CHMP3Q9Y3E7 222 aa38.36■■■■□ 3.73
CAPNS1-206ENST00000588815 PTPN12Q05209 780 aaKnown RBP38.35■■■■□ 3.73
CAPNS1-206ENST00000588815 CARMIL3Q8ND23 1372 aa38.35■■■■□ 3.73
CAPNS1-206ENST00000588815 OS9Q13438 667 aaPredicted RBP38.35■■■■□ 3.73
CAPNS1-206ENST00000588815 SYNE4Q8N205 404 aa38.35■■■■□ 3.73
CAPNS1-206ENST00000588815 RHPN1Q8TCX5 695 aa38.35■■■■□ 3.73
CAPNS1-206ENST00000588815 FBXO3Q9UK99 471 aa38.35■■■■□ 3.73
CAPNS1-206ENST00000588815 GYS1P13807 737 aa38.34■■■■□ 3.73
CAPNS1-206ENST00000588815 TTLL11Q8NHH1 800 aa38.34■■■■□ 3.73
CAPNS1-206ENST00000588815 PA2G4Q9UQ80 394 aaKnown RBP38.34■■■■□ 3.73
CAPNS1-206ENST00000588815 APBB1O00213 710 aa38.33■■■■□ 3.73
CAPNS1-206ENST00000588815 CCDC57Q2TAC2 916 aa38.33■■■■□ 3.73
CAPNS1-206ENST00000588815 TPTE2Q6XPS3 522 aa38.32■■■■□ 3.72
CAPNS1-206ENST00000588815 BICDL1Q6ZP65 573 aa38.32■■■■□ 3.72
CAPNS1-206ENST00000588815 FAM177BA6PVY3 158 aa38.31■■■■□ 3.72
CAPNS1-206ENST00000588815 SLC10A5Q5PT55 438 aa38.31■■■■□ 3.72
CAPNS1-206ENST00000588815 NBPF5PQ86XG9 351 aaPredicted RBP38.3■■■■□ 3.72
CAPNS1-206ENST00000588815 IFIT5Q13325 482 aaKnown RBP38.29■■■■□ 3.72
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms