RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 BCORQ6W2J9 1755 aa18.14■□□□□ 0.49
CCDC43-203ENST00000588210 MAP3K15Q6ZN16 1313 aa18.14■□□□□ 0.49
CCDC43-203ENST00000588210 COPS6Q7L5N1 327 aa18.14■□□□□ 0.49
CCDC43-203ENST00000588210 ARHGAP45Q92619 1136 aa18.14■□□□□ 0.49
CCDC43-203ENST00000588210 STK31Q9BXU1 1019 aa18.14■□□□□ 0.49
CCDC43-203ENST00000588210 CHMP4BQ9H444 224 aaKnown RBP18.13■□□□□ 0.49
CCDC43-203ENST00000588210 PARP3Q9Y6F1 533 aa18.13■□□□□ 0.49
CCDC43-203ENST00000588210 MFAP1P55081 439 aaKnown RBP18.13■□□□□ 0.49
CCDC43-203ENST00000588210 XAGE3Q8WTP9 111 aa18.13■□□□□ 0.49
CCDC43-203ENST00000588210 AIMP1Q12904 312 aaKnown RBP18.12■□□□□ 0.49
CCDC43-203ENST00000588210 NFIXQ14938 502 aa18.12■□□□□ 0.49
CCDC43-203ENST00000588210 MRPL50Q8N5N7 158 aaKnown RBP18.12■□□□□ 0.49
CCDC43-203ENST00000588210 TBC1D9BQ66K14 1250 aa18.11■□□□□ 0.49
CCDC43-203ENST00000588210 HLFQ16534 295 aa18.11■□□□□ 0.49
CCDC43-203ENST00000588210 ZBTB3Q9H5J0 574 aa18.11■□□□□ 0.49
CCDC43-203ENST00000588210 POLRMTO00411 1230 aaKnown RBP18.1■□□□□ 0.49
CCDC43-203ENST00000588210 ABCC4O15439 1325 aa18.1■□□□□ 0.49
CCDC43-203ENST00000588210 SLC4A2P04920 1241 aa18.1■□□□□ 0.49
CCDC43-203ENST00000588210 DDR1Q08345 913 aa18.1■□□□□ 0.49
CCDC43-203ENST00000588210 GIGYF2Q6Y7W6 1299 aaKnown RBP18.1■□□□□ 0.49
CCDC43-203ENST00000588210 BICDL1Q6ZP65 573 aa18.1■□□□□ 0.49
CCDC43-203ENST00000588210 CHD1LQ86WJ1 897 aa18.1■□□□□ 0.49
CCDC43-203ENST00000588210 SETDB2Q96T68 719 aa18.1■□□□□ 0.49
CCDC43-203ENST00000588210 PHAXQ9H814 394 aaKnown RBP18.1■□□□□ 0.49
CCDC43-203ENST00000588210 ANKRD13DQ6ZTN6 518 aa18.09■□□□□ 0.49
CCDC43-203ENST00000588210 ZBTB7BO15156 539 aaPredicted RBP18.08■□□□□ 0.49
CCDC43-203ENST00000588210 PLBD2Q8NHP8 589 aa18.08■□□□□ 0.49
CCDC43-203ENST00000588210 GCC1Q96CN9 775 aa18.08■□□□□ 0.49
CCDC43-203ENST00000588210 RBM25P49756 843 aaKnown RBP18.08■□□□□ 0.48
CCDC43-203ENST00000588210 FHDC1Q9C0D6 1143 aaPredicted RBP18.08■□□□□ 0.48
CCDC43-203ENST00000588210 NUP98P52948 1817 aa18.08■□□□□ 0.48
CCDC43-203ENST00000588210 CACNA1FO60840 1977 aa18.08■□□□□ 0.48
CCDC43-203ENST00000588210 CARMIL3Q8ND23 1372 aa18.07■□□□□ 0.48
CCDC43-203ENST00000588210 SERPINB2P05120 415 aa18.07■□□□□ 0.48
CCDC43-203ENST00000588210 HSP90AB3PQ58FF7 597 aa18.07■□□□□ 0.48
CCDC43-203ENST00000588210 BMP2KLQ5H9B9 411 aa18.07■□□□□ 0.48
CCDC43-203ENST00000588210 LNPKQ9C0E8 428 aa18.07■□□□□ 0.48
CCDC43-203ENST00000588210 RTN4Q9NQC3 1192 aaKnown RBP18.07■□□□□ 0.48
CCDC43-203ENST00000588210 ATP10DQ9P241 1426 aa18.07■□□□□ 0.48
CCDC43-203ENST00000588210 NIP7Q9Y221 180 aaKnown RBP eCLIP18.07■□□□□ 0.48
CCDC43-203ENST00000588210 DDX58O95786 925 aaKnown RBP18.07■□□□□ 0.48
CCDC43-203ENST00000588210 CHMP5Q9NZZ3 219 aa18.07■□□□□ 0.48
CCDC43-203ENST00000588210 CD2APQ9Y5K6 639 aa18.07■□□□□ 0.48
CCDC43-203ENST00000588210 SYT17Q9BSW7 474 aa18.06■□□□□ 0.48
CCDC43-203ENST00000588210 HSCBQ8IWL3 235 aa18.05■□□□□ 0.48
CCDC43-203ENST00000588210 RIC3Q7Z5B4 369 aa18.05■□□□□ 0.48
CCDC43-203ENST00000588210 ZNF34Q8IZ26 560 aa18.05■□□□□ 0.48
CCDC43-203ENST00000588210 KLHL34Q8N239 644 aa18.05■□□□□ 0.48
CCDC43-203ENST00000588210 NRXN2Q9P2S2 1712 aa18.04■□□□□ 0.48
CCDC43-203ENST00000588210 TCIRG1Q13488 830 aa18.04■□□□□ 0.48
CCDC43-203ENST00000588210 FLIIQ13045 1269 aa18.03■□□□□ 0.48
CCDC43-203ENST00000588210 G2E3Q7L622 706 aa18.03■□□□□ 0.48
CCDC43-203ENST00000588210 SNX21Q969T3 373 aa18.03■□□□□ 0.48
CCDC43-203ENST00000588210 AFDNP55196 1824 aaKnown RBP18.03■□□□□ 0.48
CCDC43-203ENST00000588210 MCM4P33991 863 aa18.03■□□□□ 0.48
CCDC43-203ENST00000588210 PARP10Q53GL7 1025 aa18.03■□□□□ 0.48
CCDC43-203ENST00000588210 KSR2Q6VAB6 950 aa18.03■□□□□ 0.48
CCDC43-203ENST00000588210 TPTE2Q6XPS3 522 aa18.03■□□□□ 0.48
CCDC43-203ENST00000588210 NBPF5PQ86XG9 351 aaPredicted RBP18.03■□□□□ 0.48
CCDC43-203ENST00000588210 API5Q9BZZ5 524 aaKnown RBP18.03■□□□□ 0.48
CCDC43-203ENST00000588210 C10orf71Q711Q0 1435 aa18.03■□□□□ 0.48
CCDC43-203ENST00000588210 UBN2Q6ZU65 1347 aa18.02■□□□□ 0.47
CCDC43-203ENST00000588210 GPTP24298 496 aa18.02■□□□□ 0.47
CCDC43-203ENST00000588210 L1TD1Q5T7N2 865 aaKnown RBP18.02■□□□□ 0.47
CCDC43-203ENST00000588210 CNBD1Q8NA66 436 aa18.02■□□□□ 0.47
CCDC43-203ENST00000588210 KIF13BQ9NQT8 1826 aa18.01■□□□□ 0.47
CCDC43-203ENST00000588210 PI4KAP2A4QPH2 592 aa18.01■□□□□ 0.47
CCDC43-203ENST00000588210 NPHP1O15259 732 aa18.01■□□□□ 0.47
CCDC43-203ENST00000588210 FKBP5Q13451 457 aaPredicted RBP18.01■□□□□ 0.47
CCDC43-203ENST00000588210 PRR5LQ6MZQ0 368 aa18.01■□□□□ 0.47
CCDC43-203ENST00000588210 PI4KAP1Q8N8J0 262 aa18.01■□□□□ 0.47
CCDC43-203ENST00000588210 NYXQ9GZU5 481 aa18.01■□□□□ 0.47
CCDC43-203ENST00000588210 ANKRD36CQ5JPF3 1778 aa18.01■□□□□ 0.47
CCDC43-203ENST00000588210 ARFGEF2Q9Y6D5 1785 aa18.01■□□□□ 0.47
CCDC43-203ENST00000588210 IBTKQ9P2D0 1353 aaPredicted RBP18■□□□□ 0.47
CCDC43-203ENST00000588210 TGFB2P61812 414 aa18■□□□□ 0.47
CCDC43-203ENST00000588210 ANKRD45Q5TZF3 282 aa18■□□□□ 0.47
CCDC43-203ENST00000588210 PPP1R42Q7Z4L9 355 aa18■□□□□ 0.47
CCDC43-203ENST00000588210 C1orf115Q9H7X2 142 aa18■□□□□ 0.47
CCDC43-203ENST00000588210 MAP3K2Q9Y2U5 619 aa18■□□□□ 0.47
CCDC43-203ENST00000588210 DDIT3P35638 169 aa18■□□□□ 0.47
CCDC43-203ENST00000588210 ST5P78524 1137 aa18■□□□□ 0.47
CCDC43-203ENST00000588210 SIRT2Q8IXJ6 389 aa18■□□□□ 0.47
CCDC43-203ENST00000588210 SPRYD3Q8NCJ5 442 aa18■□□□□ 0.47
CCDC43-203ENST00000588210 ISCA1Q9BUE6 129 aa18■□□□□ 0.47
CCDC43-203ENST00000588210 METTL22Q9BUU2 404 aaPredicted RBP18■□□□□ 0.47
CCDC43-203ENST00000588210 TRIM28Q13263 835 aaKnown RBP17.99■□□□□ 0.47
CCDC43-203ENST00000588210 SUSD4Q5VX71 490 aa17.99■□□□□ 0.47
CCDC43-203ENST00000588210 ADCY9O60503 1353 aa17.99■□□□□ 0.47
CCDC43-203ENST00000588210 FAM177BA6PVY3 158 aa17.99■□□□□ 0.47
CCDC43-203ENST00000588210 GTF2E1P29083 439 aaPredicted RBP17.99■□□□□ 0.47
CCDC43-203ENST00000588210 NLRP10Q86W26 655 aa17.99■□□□□ 0.47
CCDC43-203ENST00000588210 NLGN2Q8NFZ4 835 aa17.99■□□□□ 0.47
CCDC43-203ENST00000588210 MYD88Q99836 296 aa17.98■□□□□ 0.47
CCDC43-203ENST00000588210 BRIP1Q9BX63 1249 aa17.98■□□□□ 0.47
CCDC43-203ENST00000588210 ATP5J2-PTCD1G3V325 749 aa17.97■□□□□ 0.47
CCDC43-203ENST00000588210 NEXNQ0ZGT2 675 aa17.97■□□□□ 0.47
CCDC43-203ENST00000588210 UTP14AQ9BVJ6 771 aaKnown RBP17.97■□□□□ 0.47
CCDC43-203ENST00000588210 NTSR2O95665 410 aa17.97■□□□□ 0.47
CCDC43-203ENST00000588210 DNAAF4Q8WXU2 420 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms