RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 LARGE2Q8N3Y3 721 aa19.05■□□□□ 0.64
CSNK1D-224ENST00000584672 PSMD1Q99460 953 aa19.05■□□□□ 0.64
CSNK1D-224ENST00000584672 COL3A1P02461 1466 aaPredicted RBP19.04■□□□□ 0.64
CSNK1D-224ENST00000584672 DGKZQ13574 1117 aa19.04■□□□□ 0.64
CSNK1D-224ENST00000584672 HLFQ16534 295 aa19.04■□□□□ 0.64
CSNK1D-224ENST00000584672 NUTM1Q86Y26 1132 aa19.04■□□□□ 0.64
CSNK1D-224ENST00000584672 NBPF26B4DH59 902 aa19.03■□□□□ 0.64
CSNK1D-224ENST00000584672 NBPF10Q6P3W6 841 aaKnown RBP19.03■□□□□ 0.64
CSNK1D-224ENST00000584672 NBPF15Q8N660 670 aa19.03■□□□□ 0.64
CSNK1D-224ENST00000584672 CEMIPQ8WUJ3 1361 aa19.03■□□□□ 0.64
CSNK1D-224ENST00000584672 CELF2O95319 508 aaKnown RBP19.02■□□□□ 0.64
CSNK1D-224ENST00000584672 USP50Q70EL3 339 aaPredicted RBP19.02■□□□□ 0.64
CSNK1D-224ENST00000584672 ZNF408Q9H9D4 720 aa19.02■□□□□ 0.64
CSNK1D-224ENST00000584672 TIMELESSQ9UNS1 1208 aa19.02■□□□□ 0.64
CSNK1D-224ENST00000584672 MAP2K2P36507 400 aa19.01■□□□□ 0.63
CSNK1D-224ENST00000584672 PHACTR3Q96KR7 559 aa19.01■□□□□ 0.63
CSNK1D-224ENST00000584672 GLIS2Q9BZE0 524 aaPredicted RBP19.01■□□□□ 0.63
CSNK1D-224ENST00000584672 PDE4DIPQ5VU43 2346 aa19.01■□□□□ 0.63
CSNK1D-224ENST00000584672 SNRPA1P09661 255 aaKnown RBP19■□□□□ 0.63
CSNK1D-224ENST00000584672 CIAPIN1Q6FI81 312 aa19■□□□□ 0.63
CSNK1D-224ENST00000584672 NIM1KQ8IY84 436 aa19■□□□□ 0.63
CSNK1D-224ENST00000584672 NGEFQ8N5V2 710 aa19■□□□□ 0.63
CSNK1D-224ENST00000584672 RPGRQ92834 1020 aaKnown RBP19■□□□□ 0.63
CSNK1D-224ENST00000584672 SAPCD2Q86UD0 394 aa18.99■□□□□ 0.63
CSNK1D-224ENST00000584672 PPIP5K2O43314 1243 aa18.98■□□□□ 0.63
CSNK1D-224ENST00000584672 PRKAR2BP31323 418 aa18.98■□□□□ 0.63
CSNK1D-224ENST00000584672 CRY2Q49AN0 593 aa18.98■□□□□ 0.63
CSNK1D-224ENST00000584672 MCM10Q7L590 875 aa18.98■□□□□ 0.63
CSNK1D-224ENST00000584672 ADARB2Q9NS39 739 aaKnown RBP18.98■□□□□ 0.63
CSNK1D-224ENST00000584672 NUP98P52948 1817 aa18.97■□□□□ 0.63
CSNK1D-224ENST00000584672 PPEF1O14829 653 aaPredicted RBP18.97■□□□□ 0.63
CSNK1D-224ENST00000584672 CA12O43570 354 aa18.97■□□□□ 0.63
CSNK1D-224ENST00000584672 AOC3Q16853 763 aa18.97■□□□□ 0.63
CSNK1D-224ENST00000584672 CC2D2BQ6DHV5 1058 aa18.97■□□□□ 0.63
CSNK1D-224ENST00000584672 ZIC5Q96T25 663 aa18.97■□□□□ 0.63
CSNK1D-224ENST00000584672 GPRC5DQ9NZD1 345 aa18.97■□□□□ 0.63
CSNK1D-224ENST00000584672 GPTP24298 496 aa18.96■□□□□ 0.63
CSNK1D-224ENST00000584672 BRPF1P55201 1214 aaPredicted RBP18.96■□□□□ 0.63
CSNK1D-224ENST00000584672 SOX10P56693 466 aa18.96■□□□□ 0.63
CSNK1D-224ENST00000584672 LAMB4A4D0S4 1761 aa18.96■□□□□ 0.63
CSNK1D-224ENST00000584672 GMPSP49915 693 aaPredicted RBP18.95■□□□□ 0.62
CSNK1D-224ENST00000584672 DCTN1Q14203 1278 aa18.95■□□□□ 0.62
CSNK1D-224ENST00000584672 NYXQ9GZU5 481 aa18.95■□□□□ 0.62
CSNK1D-224ENST00000584672 NPC1L1Q9UHC9 1359 aa18.94■□□□□ 0.62
CSNK1D-224ENST00000584672 C3orf67Q6ZVT6 689 aa18.94■□□□□ 0.62
CSNK1D-224ENST00000584672 KIF7Q2M1P5 1343 aa18.94■□□□□ 0.62
CSNK1D-224ENST00000584672 RIC1Q4ADV7 1423 aa18.93■□□□□ 0.62
CSNK1D-224ENST00000584672 HOXA10P31260 410 aaPredicted RBP18.93■□□□□ 0.62
CSNK1D-224ENST00000584672 CXCL9Q07325 125 aa18.93■□□□□ 0.62
CSNK1D-224ENST00000584672 DLK2Q6UY11 383 aa18.93■□□□□ 0.62
CSNK1D-224ENST00000584672 RSPH6AQ9H0K4 717 aa18.93■□□□□ 0.62
CSNK1D-224ENST00000584672 RGL2O15211 777 aa18.92■□□□□ 0.62
CSNK1D-224ENST00000584672 TTLL7Q6ZT98 887 aa18.92■□□□□ 0.62
CSNK1D-224ENST00000584672 RTF1Q92541 710 aaKnown RBP18.92■□□□□ 0.62
CSNK1D-224ENST00000584672 RBM17Q96I25 401 aaKnown RBP18.92■□□□□ 0.62
CSNK1D-224ENST00000584672 PCGF6Q9BYE7 350 aa18.92■□□□□ 0.62
CSNK1D-224ENST00000584672 MIS18AQ9NYP9 233 aa18.92■□□□□ 0.62
CSNK1D-224ENST00000584672 UBN2Q6ZU65 1347 aa18.92■□□□□ 0.62
CSNK1D-224ENST00000584672 PER1O15534 1290 aaPredicted RBP18.91■□□□□ 0.62
CSNK1D-224ENST00000584672 HIRAP54198 1017 aaPredicted RBP18.91■□□□□ 0.62
CSNK1D-224ENST00000584672 TRPM4Q8TD43 1214 aa18.91■□□□□ 0.62
CSNK1D-224ENST00000584672 ZBTB3Q9H5J0 574 aa18.91■□□□□ 0.62
CSNK1D-224ENST00000584672 SHTN1A0MZ66 631 aa18.9■□□□□ 0.62
CSNK1D-224ENST00000584672 RAD17O75943 681 aa18.9■□□□□ 0.62
CSNK1D-224ENST00000584672 SUSD4Q5VX71 490 aa18.9■□□□□ 0.62
CSNK1D-224ENST00000584672 HHIPL1Q96JK4 782 aa18.9■□□□□ 0.62
CSNK1D-224ENST00000584672 CRAMP1Q96RY5 1269 aa18.9■□□□□ 0.62
CSNK1D-224ENST00000584672 BCL2L13Q9BXK5 485 aa18.9■□□□□ 0.62
CSNK1D-224ENST00000584672 RRP7AQ9Y3A4 280 aaKnown RBP18.9■□□□□ 0.62
CSNK1D-224ENST00000584672 HUNKP57058 714 aa18.89■□□□□ 0.61
CSNK1D-224ENST00000584672 NOGQ13253 232 aa18.89■□□□□ 0.61
CSNK1D-224ENST00000584672 GRIPAP1Q4V328 841 aa18.89■□□□□ 0.61
CSNK1D-224ENST00000584672 KIF6Q6ZMV9 814 aa18.89■□□□□ 0.61
CSNK1D-224ENST00000584672 ZNRF3Q9ULT6 936 aa18.89■□□□□ 0.61
CSNK1D-224ENST00000584672 MAP3K15Q6ZN16 1313 aa18.89■□□□□ 0.61
CSNK1D-224ENST00000584672 MYL6BP14649 208 aa18.88■□□□□ 0.61
CSNK1D-224ENST00000584672 USP48Q86UV5 1035 aa18.88■□□□□ 0.61
CSNK1D-224ENST00000584672 TMX4Q9H1E5 349 aaPredicted RBP18.88■□□□□ 0.61
CSNK1D-224ENST00000584672 ERVV-1B6SEH8 477 aa18.86■□□□□ 0.61
CSNK1D-224ENST00000584672 NTSR2O95665 410 aa18.86■□□□□ 0.61
CSNK1D-224ENST00000584672 TRIM26Q12899 539 aaPredicted RBP18.86■□□□□ 0.61
CSNK1D-224ENST00000584672 CDC37L1Q7L3B6 337 aa18.86■□□□□ 0.61
CSNK1D-224ENST00000584672 PGAP2Q9UHJ9 254 aa18.86■□□□□ 0.61
CSNK1D-224ENST00000584672 ATP6V0A2Q9Y487 856 aa18.86■□□□□ 0.61
CSNK1D-224ENST00000584672 IBTKQ9P2D0 1353 aaPredicted RBP18.85■□□□□ 0.61
CSNK1D-224ENST00000584672 ABCC4O15439 1325 aa18.85■□□□□ 0.61
CSNK1D-224ENST00000584672 LAMB2P55268 1798 aa18.84■□□□□ 0.61
CSNK1D-224ENST00000584672 U2AF1L5P0DN76 240 aaPredicted RBP18.84■□□□□ 0.61
CSNK1D-224ENST00000584672 U2AF1Q01081 240 aaKnown RBP eCLIP18.84■□□□□ 0.612e-6■■□□□ 12.1
CSNK1D-224ENST00000584672 TAF7Q15545 349 aaPredicted RBP18.84■□□□□ 0.61
CSNK1D-224ENST00000584672 DPP8Q6V1X1 898 aaPredicted RBP18.84■□□□□ 0.61
CSNK1D-224ENST00000584672 CNOT7Q9UIV1 285 aaKnown RBP18.84■□□□□ 0.61
CSNK1D-224ENST00000584672 KDM3BQ7LBC6 1761 aa18.83■□□□□ 0.61
CSNK1D-224ENST00000584672 TRPA1O75762 1119 aa18.83■□□□□ 0.6
CSNK1D-224ENST00000584672 KIF23Q02241 960 aaPredicted RBP18.83■□□□□ 0.6
CSNK1D-224ENST00000584672 ZNF34Q8IZ26 560 aa18.83■□□□□ 0.6
CSNK1D-224ENST00000584672 SUPT20HQ8NEM7 779 aa18.83■□□□□ 0.6
CSNK1D-224ENST00000584672 ZC3H15Q8WU90 426 aaKnown RBP18.83■□□□□ 0.6
CSNK1D-224ENST00000584672 NLRP3Q96P20 1036 aa18.83■□□□□ 0.6
CSNK1D-224ENST00000584672 ZBTB12Q9Y330 459 aaPredicted RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms